Gene annotation
Transcriptome id Sobic.009G176500.1
Synonym Sb09g023690
Functional annotation similar to Putative uncharacterized protein (PubMedID : 29862293)
harpin-induced protein 1 domain containing protein, expressed
UniProt C5YZV2
Pfam PF03168
Panther DB PTHR31852 PTHR31852:SF34
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G05975 : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
RAP-DB (Rice) LOC_Os05g40400.1 : harpin-induced protein 1 domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G315000 expressed protein -
2 Sobic.010G216400 expressed protein -
3 Sobic.006G224000 proton-dependent oligopeptide transport, putative, expressed -
4 Sobic.001G282900 cytidylyltransferase domain containing protein, expressed K00968: choline-phosphate cytidylyltransferase
5 Sobic.004G159400 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
6 Sobic.002G227300 expressed protein -
7 Sobic.002G220100 expressed protein -
8 Sobic.001G508466 - -
9 Sobic.008G006300 prenylated rab acceptor, putative, expressed -
10 Sobic.009G069600 NADP-ME(PubMedID : 19549309)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADP-malic enzyme(PubMedID : 26904072)@NADP-dependent malic enzyme(PubMedID : 27016024)@NADP-dependent malic enzyme, chloroplast precursor, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
11 Sobic.002G355700 histone H3, putative, expressed K11253: histone H3
12 Sobic.004G259432 - -
13 Sobic.001G197000 dehydration response related protein, putative, expressed -
14 Sobic.010G031000 expressed protein -
15 Sobic.002G090300 cytidine deaminase, putative, expressed -
16 Sobic.004G055700 -(PubMedID : 26976818)@glycine cleavage system H protein, putative, expressed K02437: gcvH, glycine cleavage system H protein
17 Sobic.002G418400 ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed -
18 Sobic.003G218400 cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed K02265: cytochrome c oxidase subunit 5b
19 Sobic.002G379200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dehydrogenase, putative, expressed K00121: frmA, ADH5, S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase
20 Sobic.004G205100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K00134: GAPDH, glyceraldehyde 3-phosphate dehydrogenase


Gene co-expression network
sample Sobic009G176500 Sobic009G176500 Sobic004G315000 Sobic004G315000 Sobic009G176500--Sobic004G315000 Sobic010G216400 Sobic010G216400 Sobic009G176500--Sobic010G216400 Sobic006G224000 Sobic006G224000 Sobic009G176500--Sobic006G224000 Sobic001G282900 Sobic001G282900 Sobic009G176500--Sobic001G282900 Sobic004G159400 Sobic004G159400 Sobic009G176500--Sobic004G159400 Sobic002G227300 Sobic002G227300 Sobic009G176500--Sobic002G227300 Sobic002G220100 Sobic002G220100 Sobic009G176500--Sobic002G220100 Sobic001G508466 Sobic001G508466 Sobic009G176500--Sobic001G508466 Sobic008G006300 Sobic008G006300 Sobic009G176500--Sobic008G006300 Sobic004G315000--Sobic009G176500 Sobic004G315000--Sobic001G282900 Sobic002G379200 Sobic002G379200 Sobic004G315000--Sobic002G379200 Sobic004G315000--Sobic010G216400 Sobic004G315000--Sobic002G227300 Sobic009G186600 Sobic009G186600 Sobic004G315000--Sobic009G186600 Sobic001G533400 Sobic001G533400 Sobic004G315000--Sobic001G533400 Sobic004G315000--Sobic006G224000 Sobic002G183400 Sobic002G183400 Sobic004G315000--Sobic002G183400 Sobic001G365700 Sobic001G365700 Sobic010G216400--Sobic001G365700 Sobic009G069600 Sobic009G069600 Sobic010G216400--Sobic009G069600 Sobic004G232500 Sobic004G232500 Sobic010G216400--Sobic004G232500 Sobic010G031000 Sobic010G031000 Sobic010G216400--Sobic010G031000 Sobic003G273000 Sobic003G273000 Sobic010G216400--Sobic003G273000 Sobic009G176400 Sobic009G176400 Sobic010G216400--Sobic009G176400 Sobic003G335300 Sobic003G335300 Sobic010G216400--Sobic003G335300 Sobic004G173700 Sobic004G173700 Sobic010G216400--Sobic004G173700 Sobic001G482800 Sobic001G482800 Sobic010G216400--Sobic001G482800 Sobic003G122200 Sobic003G122200 Sobic006G224000--Sobic003G122200 Sobic004G055700 Sobic004G055700 Sobic006G224000--Sobic004G055700 Sobic006G224000--Sobic002G227300 Sobic006G224000--Sobic009G176500 Sobic010G101600 Sobic010G101600 Sobic006G224000--Sobic010G101600 Sobic009G111400 Sobic009G111400 Sobic006G224000--Sobic009G111400 Sobic006G224000--Sobic008G006300 Sobic002G090300 Sobic002G090300 Sobic006G224000--Sobic002G090300 Sobic003G218400 Sobic003G218400 Sobic006G224000--Sobic003G218400 Sobic001G282900--Sobic004G315000 Sobic001G282900--Sobic009G176500 Sobic001G282900--Sobic010G216400 Sobic001G282900--Sobic002G183400 Sobic001G282900--Sobic002G220100 Sobic001G282900--Sobic008G006300 Sobic004G123000 Sobic004G123000 Sobic001G282900--Sobic004G123000 Sobic001G282900--Sobic006G224000 Sobic003G016300 Sobic003G016300 Sobic001G282900--Sobic003G016300 Sobic001G197000 Sobic001G197000 Sobic004G159400--Sobic001G197000 Sobic004G159400--Sobic001G508466 Sobic004G159400--Sobic008G006300 Sobic001G047800 Sobic001G047800 Sobic004G159400--Sobic001G047800 Sobic004G159400--Sobic003G273000 Sobic002G418400 Sobic002G418400 Sobic004G159400--Sobic002G418400 Sobic002G329900 Sobic002G329900 Sobic004G159400--Sobic002G329900 Sobic004G259432 Sobic004G259432 Sobic004G159400--Sobic004G259432 Sobic004G159400--Sobic004G232500 Sobic006G249300 Sobic006G249300 Sobic002G227300--Sobic006G249300 Sobic001G139100 Sobic001G139100 Sobic002G227300--Sobic001G139100 Sobic009G183400 Sobic009G183400 Sobic002G227300--Sobic009G183400 Sobic008G106700 Sobic008G106700 Sobic002G227300--Sobic008G106700 Sobic005G016700 Sobic005G016700 Sobic002G227300--Sobic005G016700 Sobic009G033300 Sobic009G033300 Sobic002G227300--Sobic009G033300 Sobic009G063900 Sobic009G063900 Sobic002G227300--Sobic009G063900 Sobic008G186100 Sobic008G186100 Sobic002G227300--Sobic008G186100 Sobic002G227300--Sobic002G418400 Sobic002G220100--Sobic001G282900 Sobic002G220100--Sobic009G176500 Sobic002G220100--Sobic004G315000 Sobic005G033100 Sobic005G033100 Sobic002G220100--Sobic005G033100 Sobic002G220100--Sobic010G216400 Sobic002G220100--Sobic002G329900 Sobic002G173200 Sobic002G173200 Sobic002G220100--Sobic002G173200 Sobic002G220100--Sobic001G047800 Sobic003G296800 Sobic003G296800 Sobic002G220100--Sobic003G296800 Sobic004G146000 Sobic004G146000 Sobic001G508466--Sobic004G146000 Sobic001G508466--Sobic004G159400 Sobic004G205100 Sobic004G205100 Sobic001G508466--Sobic004G205100 Sobic001G508466--Sobic002G418400 Sobic005G099000 Sobic005G099000 Sobic001G508466--Sobic005G099000 Sobic001G108200 Sobic001G108200 Sobic001G508466--Sobic001G108200 Sobic002G355100 Sobic002G355100 Sobic001G508466--Sobic002G355100 Sobic009G234100 Sobic009G234100 Sobic001G508466--Sobic009G234100 Sobic004G208700 Sobic004G208700 Sobic001G508466--Sobic004G208700 Sobic008G006300--Sobic001G047800 Sobic008G006300--Sobic002G418400 Sobic008G006300--Sobic004G159400 Sobic008G006300--Sobic002G329900 Sobic008G006300--Sobic003G218400 Sobic001G404800 Sobic001G404800 Sobic008G006300--Sobic001G404800 Sobic008G006300--Sobic004G232500 Sobic008G006300--Sobic002G227300 Sobic008G006300--Sobic004G055700
Octagon: transcription factors


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