Gene annotation
Transcriptome id Sobic.004G315000.1
Synonym TBR, Sb04g034670
Functional annotation expressed protein
UniProt C5XTJ1
Pfam PF14416 PF13839
Panther DB PTHR32285 PTHR32285:SF55
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G06700 : Plant protein of unknown function (DUF828)
RAP-DB (Rice) LOC_Os02g53380.1 : expressed protein
MaizeGDB (Corn) Zm00025a052557 , Zm00025a033050 , Zm00025a022289 , Zm00025a022291
Brachypodium KQK01675
Barley HORVU6Hr1G078930.12 , HORVU6Hr1G078930.11 , HORVU6Hr1G078930.10 , HORVU6Hr1G078930.15 , HORVU6Hr1G078930.14 , HORVU6Hr1G078930.13 , HORVU6Hr1G078930.9 , HORVU6Hr1G078930.8 , HORVU6Hr1G078930.3 , HORVU6Hr1G078930.2 , HORVU6Hr1G078930.1 , HORVU6Hr1G078930.7 , HORVU6Hr1G078930.6 , HORVU6Hr1G078930.5 , HORVU6Hr1G078930.4
Wheat TraesCS6A02G323200 , TraesCS7A02G167500 , TraesCS6B02G353800 , TraesCS4D02G184700 , TraesCS4D02G184700 , TraesCS6D02G303000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G176500 similar to Putative uncharacterized protein(PubMedID : 29862293)@harpin-induced protein 1 domain containing protein, expressed -
2 Sobic.001G282900 cytidylyltransferase domain containing protein, expressed K00968: choline-phosphate cytidylyltransferase
3 Sobic.002G379200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dehydrogenase, putative, expressed K00121: frmA, ADH5, S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase
4 Sobic.010G216400 expressed protein -
5 Sobic.002G227300 expressed protein -
6 Sobic.009G186600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.001G533400 major facilitator superfamily domain-containing protein 5, putative, expressed -
8 Sobic.006G224000 proton-dependent oligopeptide transport, putative, expressed -
9 Sobic.002G183400 heavy metal-associated domain containing protein, expressed -
10 Sobic.002G220100 expressed protein -
11 Sobic.002G173200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
12 Sobic.004G205100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K00134: GAPDH, glyceraldehyde 3-phosphate dehydrogenase
13 Sobic.004G239500 RING-H2 finger protein ATL1Q, putative, expressed -
14 Sobic.004G055700 -(PubMedID : 26976818)@glycine cleavage system H protein, putative, expressed K02437: gcvH, glycine cleavage system H protein
15 Sobic.001G455700 ATMAP70 protein, putative, expressed -
16 Sobic.010G028200 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase
17 Sobic.010G001900 Long chain acyl-CoA oxidase(PubMedID : 18985313)@acyl-coenzyme A oxidase 1.2, peroxisomal, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
18 Sobic.001G508466 - -
19 Sobic.003G357100 phosphatidic acid phosphatase-related, putative, expressed -
20 Sobic.004G273100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@jmjC domain containing protein, expressed -


Gene co-expression network
sample Sobic004G315000 Sobic004G315000 Sobic009G176500 Sobic009G176500 Sobic004G315000--Sobic009G176500 Sobic001G282900 Sobic001G282900 Sobic004G315000--Sobic001G282900 Sobic002G379200 Sobic002G379200 Sobic004G315000--Sobic002G379200 Sobic010G216400 Sobic010G216400 Sobic004G315000--Sobic010G216400 Sobic002G227300 Sobic002G227300 Sobic004G315000--Sobic002G227300 Sobic009G186600 Sobic009G186600 Sobic004G315000--Sobic009G186600 Sobic001G533400 Sobic001G533400 Sobic004G315000--Sobic001G533400 Sobic006G224000 Sobic006G224000 Sobic004G315000--Sobic006G224000 Sobic002G183400 Sobic002G183400 Sobic004G315000--Sobic002G183400 Sobic009G176500--Sobic004G315000 Sobic009G176500--Sobic010G216400 Sobic009G176500--Sobic006G224000 Sobic009G176500--Sobic001G282900 Sobic004G159400 Sobic004G159400 Sobic009G176500--Sobic004G159400 Sobic009G176500--Sobic002G227300 Sobic002G220100 Sobic002G220100 Sobic009G176500--Sobic002G220100 Sobic001G508466 Sobic001G508466 Sobic009G176500--Sobic001G508466 Sobic008G006300 Sobic008G006300 Sobic009G176500--Sobic008G006300 Sobic001G282900--Sobic004G315000 Sobic001G282900--Sobic009G176500 Sobic001G282900--Sobic010G216400 Sobic001G282900--Sobic002G183400 Sobic001G282900--Sobic002G220100 Sobic001G282900--Sobic008G006300 Sobic004G123000 Sobic004G123000 Sobic001G282900--Sobic004G123000 Sobic001G282900--Sobic006G224000 Sobic003G016300 Sobic003G016300 Sobic001G282900--Sobic003G016300 Sobic006G125100 Sobic006G125100 Sobic002G379200--Sobic006G125100 Sobic001G325400 Sobic001G325400 Sobic002G379200--Sobic001G325400 Sobic001G503100 Sobic001G503100 Sobic002G379200--Sobic001G503100 Sobic010G185000 Sobic010G185000 Sobic002G379200--Sobic010G185000 Sobic001G119000 Sobic001G119000 Sobic002G379200--Sobic001G119000 Sobic004G046200 Sobic004G046200 Sobic002G379200--Sobic004G046200 Sobic009G111000 Sobic009G111000 Sobic002G379200--Sobic009G111000 Sobic001G389000 Sobic001G389000 Sobic002G379200--Sobic001G389000 Sobic003G429000 Sobic003G429000 Sobic002G379200--Sobic003G429000 Sobic001G365700 Sobic001G365700 Sobic010G216400--Sobic001G365700 Sobic009G069600 Sobic009G069600 Sobic010G216400--Sobic009G069600 Sobic004G232500 Sobic004G232500 Sobic010G216400--Sobic004G232500 Sobic010G031000 Sobic010G031000 Sobic010G216400--Sobic010G031000 Sobic003G273000 Sobic003G273000 Sobic010G216400--Sobic003G273000 Sobic009G176400 Sobic009G176400 Sobic010G216400--Sobic009G176400 Sobic003G335300 Sobic003G335300 Sobic010G216400--Sobic003G335300 Sobic004G173700 Sobic004G173700 Sobic010G216400--Sobic004G173700 Sobic001G482800 Sobic001G482800 Sobic010G216400--Sobic001G482800 Sobic006G249300 Sobic006G249300 Sobic002G227300--Sobic006G249300 Sobic001G139100 Sobic001G139100 Sobic002G227300--Sobic001G139100 Sobic009G183400 Sobic009G183400 Sobic002G227300--Sobic009G183400 Sobic008G106700 Sobic008G106700 Sobic002G227300--Sobic008G106700 Sobic005G016700 Sobic005G016700 Sobic002G227300--Sobic005G016700 Sobic009G033300 Sobic009G033300 Sobic002G227300--Sobic009G033300 Sobic009G063900 Sobic009G063900 Sobic002G227300--Sobic009G063900 Sobic008G186100 Sobic008G186100 Sobic002G227300--Sobic008G186100 Sobic002G418400 Sobic002G418400 Sobic002G227300--Sobic002G418400 Sobic001G435000 Sobic001G435000 Sobic009G186600--Sobic001G435000 Sobic010G066700 Sobic010G066700 Sobic009G186600--Sobic010G066700 Sobic009G186600--Sobic009G183400 Sobic009G186600--Sobic001G389000 Sobic002G329000 Sobic002G329000 Sobic009G186600--Sobic002G329000 Sobic007G155000 Sobic007G155000 Sobic009G186600--Sobic007G155000 Sobic005G103300 Sobic005G103300 Sobic009G186600--Sobic005G103300 Sobic010G178500 Sobic010G178500 Sobic009G186600--Sobic010G178500 Sobic001G476500 Sobic001G476500 Sobic009G186600--Sobic001G476500 Sobic001G339700 Sobic001G339700 Sobic001G533400--Sobic001G339700 Sobic010G001900 Sobic010G001900 Sobic001G533400--Sobic010G001900 Sobic001G119100 Sobic001G119100 Sobic001G533400--Sobic001G119100 Sobic002G201600 Sobic002G201600 Sobic001G533400--Sobic002G201600 Sobic008G025600 Sobic008G025600 Sobic001G533400--Sobic008G025600 Sobic004G205100 Sobic004G205100 Sobic001G533400--Sobic004G205100 Sobic005G091500 Sobic005G091500 Sobic001G533400--Sobic005G091500 Sobic001G533400--Sobic001G119000 Sobic001G252300 Sobic001G252300 Sobic001G533400--Sobic001G252300 Sobic003G122200 Sobic003G122200 Sobic006G224000--Sobic003G122200 Sobic004G055700 Sobic004G055700 Sobic006G224000--Sobic004G055700 Sobic006G224000--Sobic002G227300 Sobic006G224000--Sobic009G176500 Sobic010G101600 Sobic010G101600 Sobic006G224000--Sobic010G101600 Sobic009G111400 Sobic009G111400 Sobic006G224000--Sobic009G111400 Sobic006G224000--Sobic008G006300 Sobic002G090300 Sobic002G090300 Sobic006G224000--Sobic002G090300 Sobic003G218400 Sobic003G218400 Sobic006G224000--Sobic003G218400 Sobic004G228700 Sobic004G228700 Sobic002G183400--Sobic004G228700 Sobic008G129000 Sobic008G129000 Sobic002G183400--Sobic008G129000 Sobic001G437000 Sobic001G437000 Sobic002G183400--Sobic001G437000 Sobic002G183400--Sobic001G282900 Sobic001G513300 Sobic001G513300 Sobic002G183400--Sobic001G513300 Sobic010G028200 Sobic010G028200 Sobic002G183400--Sobic010G028200 Sobic002G362000 Sobic002G362000 Sobic002G183400--Sobic002G362000 Sobic002G136700 Sobic002G136700 Sobic002G183400--Sobic002G136700 Sobic002G183400--Sobic004G123000
Octagon: transcription factors


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