Gene annotation
Transcriptome id Sobic.002G183400.1
Synonym Sb02g023130
Functional annotation heavy metal-associated domain containing protein, expressed
UniProt C5XB98
Pfam PF00403
Panther DB PTHR22814 PTHR22814:SF103
NCBI CDD KOG1603; Copper chaperone
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G39700 : Heavy metal transport/detoxification superfamily protein
RAP-DB (Rice) LOC_Os09g20000.1 : heavy metal-associated domain containing protein, expressed
MaizeGDB (Corn) Zm00025a046700 , Zm00025a013814 , Zm00025a011977
Brachypodium PNT64459 , KQJ90006 , KQJ81970
Barley HORVU5Hr1G057730.1
Wheat TraesCS2B02G186900 , TraesCS5D02G199500 , TraesCS5B02G191700 , TraesCS5A02G191400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G228700 expressed protein -
2 Sobic.008G129000 phosphatidic acid phosphatase-related, putative, expressed -
3 Sobic.001G437000 ACT domain containing protein, expressed -
4 Sobic.001G282900 cytidylyltransferase domain containing protein, expressed K00968: choline-phosphate cytidylyltransferase
5 Sobic.001G513300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein-methionine-S-oxide reductase, putative, expressed -
6 Sobic.010G028200 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase
7 Sobic.002G362000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@vesicle transport protein GOT1B, putative, expressed -
8 Sobic.002G136700 expressed protein -
9 Sobic.004G123000 expressed protein -
10 Sobic.001G173300 alpha-1,4-glucan-protein synthase, putative, expressed K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase
11 Sobic.005G142101 - K19042: E3 ubiquitin-protein ligase BOI and related proteins
12 Sobic.003G273000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
13 Sobic.004G318100 adenylate kinase, putative, expressed K13800: CMPK1, UMP-CMP kinase
14 Sobic.010G216400 expressed protein -
15 Sobic.006G100700 expressed protein -
16 Sobic.010G065900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@formin-like protein 13, putative, expressed -
17 Sobic.008G006300 prenylated rab acceptor, putative, expressed -
18 Sobic.009G217000 chaperone protein dnaJ 10, putative, expressed -
19 Sobic.004G315000 expressed protein -
20 Sobic.004G259432 - -


Gene co-expression network
sample Sobic002G183400 Sobic002G183400 Sobic004G228700 Sobic004G228700 Sobic002G183400--Sobic004G228700 Sobic008G129000 Sobic008G129000 Sobic002G183400--Sobic008G129000 Sobic001G437000 Sobic001G437000 Sobic002G183400--Sobic001G437000 Sobic001G282900 Sobic001G282900 Sobic002G183400--Sobic001G282900 Sobic001G513300 Sobic001G513300 Sobic002G183400--Sobic001G513300 Sobic010G028200 Sobic010G028200 Sobic002G183400--Sobic010G028200 Sobic002G362000 Sobic002G362000 Sobic002G183400--Sobic002G362000 Sobic002G136700 Sobic002G136700 Sobic002G183400--Sobic002G136700 Sobic004G123000 Sobic004G123000 Sobic002G183400--Sobic004G123000 Sobic004G228700--Sobic001G513300 Sobic004G228700--Sobic002G136700 Sobic001G110000 Sobic001G110000 Sobic004G228700--Sobic001G110000 Sobic004G259600 Sobic004G259600 Sobic004G228700--Sobic004G259600 Sobic003G273000 Sobic003G273000 Sobic004G228700--Sobic003G273000 Sobic004G259432 Sobic004G259432 Sobic004G228700--Sobic004G259432 Sobic001G197000 Sobic001G197000 Sobic004G228700--Sobic001G197000 Sobic004G228700--Sobic002G183400 Sobic004G159400 Sobic004G159400 Sobic004G228700--Sobic004G159400 Sobic001G308700 Sobic001G308700 Sobic008G129000--Sobic001G308700 Sobic001G284400 Sobic001G284400 Sobic008G129000--Sobic001G284400 Sobic008G129000--Sobic001G513300 Sobic004G278000 Sobic004G278000 Sobic008G129000--Sobic004G278000 Sobic008G129000--Sobic002G183400 Sobic006G230400 Sobic006G230400 Sobic008G129000--Sobic006G230400 Sobic004G268200 Sobic004G268200 Sobic008G129000--Sobic004G268200 Sobic008G129000--Sobic004G228700 Sobic008G129000--Sobic003G273000 Sobic006G165100 Sobic006G165100 Sobic001G437000--Sobic006G165100 Sobic008G177800 Sobic008G177800 Sobic001G437000--Sobic008G177800 Sobic006G194000 Sobic006G194000 Sobic001G437000--Sobic006G194000 Sobic009G073300 Sobic009G073300 Sobic001G437000--Sobic009G073300 Sobic006G231100 Sobic006G231100 Sobic001G437000--Sobic006G231100 Sobic009G027900 Sobic009G027900 Sobic001G437000--Sobic009G027900 Sobic001G338600 Sobic001G338600 Sobic001G437000--Sobic001G338600 Sobic002G282300 Sobic002G282300 Sobic001G437000--Sobic002G282300 Sobic002G278500 Sobic002G278500 Sobic001G437000--Sobic002G278500 Sobic004G315000 Sobic004G315000 Sobic001G282900--Sobic004G315000 Sobic009G176500 Sobic009G176500 Sobic001G282900--Sobic009G176500 Sobic010G216400 Sobic010G216400 Sobic001G282900--Sobic010G216400 Sobic001G282900--Sobic002G183400 Sobic002G220100 Sobic002G220100 Sobic001G282900--Sobic002G220100 Sobic008G006300 Sobic008G006300 Sobic001G282900--Sobic008G006300 Sobic001G282900--Sobic004G123000 Sobic006G224000 Sobic006G224000 Sobic001G282900--Sobic006G224000 Sobic003G016300 Sobic003G016300 Sobic001G282900--Sobic003G016300 Sobic001G513300--Sobic003G273000 Sobic001G513300--Sobic004G228700 Sobic007G016100 Sobic007G016100 Sobic001G513300--Sobic007G016100 Sobic001G513300--Sobic001G308700 Sobic010G031000 Sobic010G031000 Sobic001G513300--Sobic010G031000 Sobic001G513300--Sobic002G136700 Sobic001G508466 Sobic001G508466 Sobic001G513300--Sobic001G508466 Sobic001G295100 Sobic001G295100 Sobic001G513300--Sobic001G295100 Sobic001G513300--Sobic002G362000 Sobic003G209000 Sobic003G209000 Sobic010G028200--Sobic003G209000 Sobic010G065900 Sobic010G065900 Sobic010G028200--Sobic010G065900 Sobic002G418400 Sobic002G418400 Sobic010G028200--Sobic002G418400 Sobic001G404800 Sobic001G404800 Sobic010G028200--Sobic001G404800 Sobic003G436700 Sobic003G436700 Sobic010G028200--Sobic003G436700 Sobic004G055700 Sobic004G055700 Sobic010G028200--Sobic004G055700 Sobic003G160700 Sobic003G160700 Sobic010G028200--Sobic003G160700 Sobic004G008400 Sobic004G008400 Sobic010G028200--Sobic004G008400 Sobic010G028200--Sobic002G136700 Sobic010G262300 Sobic010G262300 Sobic002G362000--Sobic010G262300 Sobic002G362000--Sobic001G308700 Sobic006G239300 Sobic006G239300 Sobic002G362000--Sobic006G239300 Sobic002G362000--Sobic004G123000 Sobic002G362000--Sobic001G513300 Sobic002G362000--Sobic002G183400 Sobic002G362000--Sobic004G259600 Sobic009G063900 Sobic009G063900 Sobic002G362000--Sobic009G063900 Sobic002G362000--Sobic003G273000 Sobic002G136700--Sobic004G228700 Sobic003G215700 Sobic003G215700 Sobic002G136700--Sobic003G215700 Sobic002G136700--Sobic002G418400 Sobic002G136700--Sobic010G028200 Sobic002G136700--Sobic003G209000 Sobic003G218400 Sobic003G218400 Sobic002G136700--Sobic003G218400 Sobic001G047800 Sobic001G047800 Sobic002G136700--Sobic001G047800 Sobic001G533500 Sobic001G533500 Sobic002G136700--Sobic001G533500 Sobic002G135200 Sobic002G135200 Sobic002G136700--Sobic002G135200 Sobic009G054000 Sobic009G054000 Sobic004G123000--Sobic009G054000 Sobic004G123000--Sobic006G239300 Sobic001G350600 Sobic001G350600 Sobic004G123000--Sobic001G350600 Sobic004G123000--Sobic003G209000 Sobic002G296200 Sobic002G296200 Sobic004G123000--Sobic002G296200 Sobic006G013000 Sobic006G013000 Sobic004G123000--Sobic006G013000 Sobic003G155400 Sobic003G155400 Sobic004G123000--Sobic003G155400 Sobic004G159000 Sobic004G159000 Sobic004G123000--Sobic004G159000 Sobic004G123000--Sobic001G404800
Octagon: transcription factors


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