Gene annotation
Transcriptome id Sobic.001G437000.2,Sobic.001G437000.1
Synonym Sb01g041100, ACR8
Functional annotation ACT domain containing protein, expressed
UniProt A0A1Z5SAG2 , C5WQY3
Pfam PF01842
Panther DB PTHR31096 PTHR31096:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016597; amino acid binding GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT1G12420 : ACT domain repeat 8
RAP-DB (Rice) LOC_Os03g14370.2 : ACT domain containing protein, expressed
MaizeGDB (Corn) Zm00025a052880 , Zm00025a030232 , Zm00025a005284 , Zm00025a001566
Brachypodium KQK22576 , KQJ94890 , PNT77729
Barley HORVU5Hr1G046110.1 , HORVU1Hr1G085110.1 , HORVU4Hr1G018250.1 , HORVU5Hr1G047640.1 , HORVU0Hr1G008850.3 , HORVU0Hr1G008850.2 , HORVU0Hr1G008850.5 , HORVU0Hr1G008850.4 , HORVU0Hr1G008850.6
Wheat TraesCS4D02G224900 , TraesCS4B02G224300 , TraesCS4A02G079700
Populus -


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cDNA sequences
Sobic.001G437000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G165100 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
2 Sobic.008G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
3 Sobic.006G194000 DUF581 domain containing protein, expressed -
4 Sobic.009G073300 harpin-induced protein 1 domain containing protein, expressed -
5 Sobic.006G231100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
6 Sobic.009G027900 TKL_IRAK_CR4L.4 - The CR4L subfamily has homology with Crinkly4, expressed -
7 Sobic.001G338600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
8 Sobic.002G282300 expressed protein -
9 Sobic.002G278500 nodulin, putative, expressed -
10 Sobic.003G324400 Not investigated(PubMedID : 23766026)@Contribute to rice salt tolerance under a salt inducible abscisic acid 2 (ABA2) promoter(PubMedID : 28393269)@AP2 domain containing protein, expressed -
11 Sobic.004G286600 Protecting the plants under varied stress situations(PubMedID : 26536883)@dehydrin, putative, expressed -
12 Sobic.009G183300 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
13 Sobic.006G230900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
14 Sobic.004G146000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
15 Sobic.001G459800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
16 Sobic.006G231200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
17 Sobic.001G322200 hydrolase, alpha/beta fold family protein, putative, expressed -
18 Sobic.001G173300 alpha-1,4-glucan-protein synthase, putative, expressed K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase
19 Sobic.003G144700 universal stress protein domain containing protein, putative, expressed -
20 Sobic.010G217800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic001G437000 Sobic001G437000 Sobic006G165100 Sobic006G165100 Sobic001G437000--Sobic006G165100 Sobic008G177800 Sobic008G177800 Sobic001G437000--Sobic008G177800 Sobic006G194000 Sobic006G194000 Sobic001G437000--Sobic006G194000 Sobic009G073300 Sobic009G073300 Sobic001G437000--Sobic009G073300 Sobic006G231100 Sobic006G231100 Sobic001G437000--Sobic006G231100 Sobic009G027900 Sobic009G027900 Sobic001G437000--Sobic009G027900 Sobic001G338600 Sobic001G338600 Sobic001G437000--Sobic001G338600 Sobic002G282300 Sobic002G282300 Sobic001G437000--Sobic002G282300 Sobic002G278500 Sobic002G278500 Sobic001G437000--Sobic002G278500 Sobic002G140300 Sobic002G140300 Sobic006G165100--Sobic002G140300 Sobic003G324400 Sobic003G324400 Sobic006G165100--Sobic003G324400 Sobic001G077400 Sobic001G077400 Sobic006G165100--Sobic001G077400 Sobic001G052300 Sobic001G052300 Sobic006G165100--Sobic001G052300 Sobic002G036100 Sobic002G036100 Sobic006G165100--Sobic002G036100 Sobic009G036100 Sobic009G036100 Sobic006G165100--Sobic009G036100 Sobic009G255500 Sobic009G255500 Sobic006G165100--Sobic009G255500 Sobic004G280900 Sobic004G280900 Sobic006G165100--Sobic004G280900 Sobic009G200700 Sobic009G200700 Sobic006G165100--Sobic009G200700 Sobic002G294700 Sobic002G294700 Sobic008G177800--Sobic002G294700 Sobic008G177800--Sobic006G231100 Sobic010G234600 Sobic010G234600 Sobic008G177800--Sobic010G234600 Sobic004G286600 Sobic004G286600 Sobic008G177800--Sobic004G286600 Sobic002G415600 Sobic002G415600 Sobic008G177800--Sobic002G415600 Sobic010G217800 Sobic010G217800 Sobic008G177800--Sobic010G217800 Sobic008G177800--Sobic009G255500 Sobic006G230900 Sobic006G230900 Sobic008G177800--Sobic006G230900 Sobic001G077700 Sobic001G077700 Sobic008G177800--Sobic001G077700 Sobic003G144700 Sobic003G144700 Sobic006G194000--Sobic003G144700 Sobic001G459800 Sobic001G459800 Sobic006G194000--Sobic001G459800 Sobic006G267200 Sobic006G267200 Sobic006G194000--Sobic006G267200 Sobic006G194000--Sobic006G230900 Sobic001G320900 Sobic001G320900 Sobic006G194000--Sobic001G320900 Sobic006G194000--Sobic002G415600 Sobic001G426000 Sobic001G426000 Sobic006G194000--Sobic001G426000 Sobic006G194000--Sobic010G217800 Sobic006G194000--Sobic002G282300 Sobic001G532200 Sobic001G532200 Sobic009G073300--Sobic001G532200 Sobic009G073300--Sobic004G286600 Sobic009G073300--Sobic008G177800 Sobic009G073300--Sobic001G437000 Sobic009G073300--Sobic006G231100 Sobic007G057100 Sobic007G057100 Sobic009G073300--Sobic007G057100 Sobic001G516600 Sobic001G516600 Sobic009G073300--Sobic001G516600 Sobic006G194100 Sobic006G194100 Sobic009G073300--Sobic006G194100 Sobic001G173300 Sobic001G173300 Sobic009G073300--Sobic001G173300 Sobic006G231100--Sobic008G177800 Sobic006G231100--Sobic006G230900 Sobic006G231200 Sobic006G231200 Sobic006G231100--Sobic006G231200 Sobic006G231100--Sobic010G217800 Sobic006G231100--Sobic002G415600 Sobic006G231100--Sobic010G234600 Sobic006G231100--Sobic004G286600 Sobic006G231100--Sobic002G294700 Sobic006G231100--Sobic002G282300 Sobic009G248500 Sobic009G248500 Sobic009G027900--Sobic009G248500 Sobic001G322200 Sobic001G322200 Sobic009G027900--Sobic001G322200 Sobic006G066200 Sobic006G066200 Sobic009G027900--Sobic006G066200 Sobic008G042900 Sobic008G042900 Sobic009G027900--Sobic008G042900 Sobic009G027900--Sobic002G140300 Sobic009G027900--Sobic001G532200 Sobic001G464900 Sobic001G464900 Sobic009G027900--Sobic001G464900 Sobic009G027900--Sobic006G165100 Sobic009G027900--Sobic001G516600 Sobic001G338600--Sobic002G282300 Sobic001G338600--Sobic002G278500 Sobic004G228900 Sobic004G228900 Sobic001G338600--Sobic004G228900 Sobic001G338600--Sobic001G426000 Sobic001G205350 Sobic001G205350 Sobic001G338600--Sobic001G205350 Sobic001G338600--Sobic006G230900 Sobic001G338600--Sobic003G144700 Sobic001G441100 Sobic001G441100 Sobic001G338600--Sobic001G441100 Sobic004G283500 Sobic004G283500 Sobic001G338600--Sobic004G283500 Sobic002G282300--Sobic006G230900 Sobic007G213800 Sobic007G213800 Sobic002G282300--Sobic007G213800 Sobic002G282300--Sobic001G205350 Sobic002G282300--Sobic001G338600 Sobic002G282300--Sobic003G144700 Sobic003G197200 Sobic003G197200 Sobic002G282300--Sobic003G197200 Sobic002G282300--Sobic006G231200 Sobic002G282300--Sobic001G320900 Sobic004G169200 Sobic004G169200 Sobic002G282300--Sobic004G169200 Sobic002G278500--Sobic004G228900 Sobic002G278500--Sobic001G441100 Sobic002G278500--Sobic001G338600 Sobic005G122500 Sobic005G122500 Sobic002G278500--Sobic005G122500 Sobic009G217600 Sobic009G217600 Sobic002G278500--Sobic009G217600 Sobic002G278500--Sobic002G294700 Sobic002G278500--Sobic002G282300 Sobic001G341600 Sobic001G341600 Sobic002G278500--Sobic001G341600 Sobic002G278500--Sobic008G177800
Octagon: transcription factors


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