Gene annotation
Transcriptome id Sobic.002G220100.3,Sobic.002G220100.2,Sobic.002G220100.4,Sobic.002G220100.1
Synonym
Functional annotation expressed protein
UniProt A0A1W0W5E6 , A0A1W0W5A5 , A0A1W0W5H0 , A0A1B6QCT7
Pfam -
Panther DB PTHR36478 PTHR36478:SF2 PTHR36478:SF2 PTHR36478
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g52660.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G282900 cytidylyltransferase domain containing protein, expressed K00968: choline-phosphate cytidylyltransferase
2 Sobic.009G176500 similar to Putative uncharacterized protein(PubMedID : 29862293)@harpin-induced protein 1 domain containing protein, expressed -
3 Sobic.004G315000 expressed protein -
4 Sobic.005G033100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@acyl-CoA synthetase protein, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
5 Sobic.010G216400 expressed protein -
6 Sobic.002G329900 core histone H2A/H2B/H3/H4, putative, expressed K11251: histone H2A
7 Sobic.002G173200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.001G047800 cytochrome b-c1 complex subunit 7, putative, expressed K00417: QCR7, ubiquinol-cytochrome c reductase subunit 7
9 Sobic.003G296800 expressed protein -
10 Sobic.004G159400 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
11 Sobic.001G197000 dehydration response related protein, putative, expressed -
12 Sobic.010G031000 expressed protein -
13 Sobic.001G031800 ribosomal protein L30 containing protein, expressed K02907: RP-L30, MRPL30, large subunit ribosomal protein L30
14 Sobic.008G006300 prenylated rab acceptor, putative, expressed -
15 Sobic.003G289601 - -
16 Sobic.002G169300 transporter family protein, putative, expressed -
17 Sobic.003G215700 ATP synthase epsilon chain, mitochondrial, putative, expressed K02135: ATPeF1E, ATP5E, F-type H+-transporting ATPase subunit epsilon
18 Sobic.002G263100 ferredoxin 1-like isoform 1, putative, expressed -
19 Sobic.003G016300 SFT2, putative, expressed -
20 Sobic.004G123000 expressed protein -


Gene co-expression network
sample Sobic002G220100 Sobic002G220100 Sobic001G282900 Sobic001G282900 Sobic002G220100--Sobic001G282900 Sobic009G176500 Sobic009G176500 Sobic002G220100--Sobic009G176500 Sobic004G315000 Sobic004G315000 Sobic002G220100--Sobic004G315000 Sobic005G033100 Sobic005G033100 Sobic002G220100--Sobic005G033100 Sobic010G216400 Sobic010G216400 Sobic002G220100--Sobic010G216400 Sobic002G329900 Sobic002G329900 Sobic002G220100--Sobic002G329900 Sobic002G173200 Sobic002G173200 Sobic002G220100--Sobic002G173200 Sobic001G047800 Sobic001G047800 Sobic002G220100--Sobic001G047800 Sobic003G296800 Sobic003G296800 Sobic002G220100--Sobic003G296800 Sobic001G282900--Sobic004G315000 Sobic001G282900--Sobic009G176500 Sobic001G282900--Sobic010G216400 Sobic002G183400 Sobic002G183400 Sobic001G282900--Sobic002G183400 Sobic001G282900--Sobic002G220100 Sobic008G006300 Sobic008G006300 Sobic001G282900--Sobic008G006300 Sobic004G123000 Sobic004G123000 Sobic001G282900--Sobic004G123000 Sobic006G224000 Sobic006G224000 Sobic001G282900--Sobic006G224000 Sobic003G016300 Sobic003G016300 Sobic001G282900--Sobic003G016300 Sobic009G176500--Sobic004G315000 Sobic009G176500--Sobic010G216400 Sobic009G176500--Sobic006G224000 Sobic009G176500--Sobic001G282900 Sobic004G159400 Sobic004G159400 Sobic009G176500--Sobic004G159400 Sobic002G227300 Sobic002G227300 Sobic009G176500--Sobic002G227300 Sobic009G176500--Sobic002G220100 Sobic001G508466 Sobic001G508466 Sobic009G176500--Sobic001G508466 Sobic009G176500--Sobic008G006300 Sobic004G315000--Sobic009G176500 Sobic004G315000--Sobic001G282900 Sobic002G379200 Sobic002G379200 Sobic004G315000--Sobic002G379200 Sobic004G315000--Sobic010G216400 Sobic004G315000--Sobic002G227300 Sobic009G186600 Sobic009G186600 Sobic004G315000--Sobic009G186600 Sobic001G533400 Sobic001G533400 Sobic004G315000--Sobic001G533400 Sobic004G315000--Sobic006G224000 Sobic004G315000--Sobic002G183400 Sobic005G033100--Sobic010G216400 Sobic005G033100--Sobic002G220100 Sobic001G365700 Sobic001G365700 Sobic005G033100--Sobic001G365700 Sobic002G034700 Sobic002G034700 Sobic005G033100--Sobic002G034700 Sobic005G033100--Sobic009G176500 Sobic004G127000 Sobic004G127000 Sobic005G033100--Sobic004G127000 Sobic005G033100--Sobic001G282900 Sobic001G139700 Sobic001G139700 Sobic005G033100--Sobic001G139700 Sobic005G033100--Sobic003G016300 Sobic010G216400--Sobic001G365700 Sobic009G069600 Sobic009G069600 Sobic010G216400--Sobic009G069600 Sobic004G232500 Sobic004G232500 Sobic010G216400--Sobic004G232500 Sobic010G031000 Sobic010G031000 Sobic010G216400--Sobic010G031000 Sobic003G273000 Sobic003G273000 Sobic010G216400--Sobic003G273000 Sobic009G176400 Sobic009G176400 Sobic010G216400--Sobic009G176400 Sobic003G335300 Sobic003G335300 Sobic010G216400--Sobic003G335300 Sobic004G173700 Sobic004G173700 Sobic010G216400--Sobic004G173700 Sobic001G482800 Sobic001G482800 Sobic010G216400--Sobic001G482800 Sobic002G329900--Sobic001G047800 Sobic001G110000 Sobic001G110000 Sobic002G329900--Sobic001G110000 Sobic001G404800 Sobic001G404800 Sobic002G329900--Sobic001G404800 Sobic002G263100 Sobic002G263100 Sobic002G329900--Sobic002G263100 Sobic003G215700 Sobic003G215700 Sobic002G329900--Sobic003G215700 Sobic001G197000 Sobic001G197000 Sobic002G329900--Sobic001G197000 Sobic001G519000 Sobic001G519000 Sobic002G329900--Sobic001G519000 Sobic002G329900--Sobic008G006300 Sobic002G348100 Sobic002G348100 Sobic002G329900--Sobic002G348100 Sobic005G004700 Sobic005G004700 Sobic002G173200--Sobic005G004700 Sobic002G233500 Sobic002G233500 Sobic002G173200--Sobic002G233500 Sobic002G173200--Sobic002G379200 Sobic001G402200 Sobic001G402200 Sobic002G173200--Sobic001G402200 Sobic002G173200--Sobic004G315000 Sobic010G042500 Sobic010G042500 Sobic002G173200--Sobic010G042500 Sobic006G099900 Sobic006G099900 Sobic002G173200--Sobic006G099900 Sobic001G187200 Sobic001G187200 Sobic002G173200--Sobic001G187200 Sobic001G333400 Sobic001G333400 Sobic002G173200--Sobic001G333400 Sobic002G309700 Sobic002G309700 Sobic001G047800--Sobic002G309700 Sobic001G047800--Sobic003G215700 Sobic002G418400 Sobic002G418400 Sobic001G047800--Sobic002G418400 Sobic004G260200 Sobic004G260200 Sobic001G047800--Sobic004G260200 Sobic001G047800--Sobic001G404800 Sobic001G047800--Sobic002G263100 Sobic004G060500 Sobic004G060500 Sobic001G047800--Sobic004G060500 Sobic007G134900 Sobic007G134900 Sobic001G047800--Sobic007G134900 Sobic001G047800--Sobic001G519000 Sobic003G296800--Sobic001G047800 Sobic003G296800--Sobic003G215700 Sobic003G296800--Sobic002G263100 Sobic002G296200 Sobic002G296200 Sobic003G296800--Sobic002G296200 Sobic004G183200 Sobic004G183200 Sobic003G296800--Sobic004G183200 Sobic003G296800--Sobic001G404800 Sobic006G262300 Sobic006G262300 Sobic003G296800--Sobic006G262300 Sobic003G296800--Sobic002G309700 Sobic003G296800--Sobic004G060500
Octagon: transcription factors


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