Gene annotation
Transcriptome id Sobic.010G001900.1
Synonym ACX1, Sb10g000390, ATACX1, BLMC, BLOOM CUTICLE
Functional annotation Long chain acyl-CoA oxidase (PubMedID : 18985313)
acyl-coenzyme A oxidase 1.2, peroxisomal, putative, expressed
UniProt A0A194YGJ4
Pfam PF02770 PF14749 PF01756
Panther DB PTHR10909 PTHR10909:SF250
NCBI CDD -
KEGG Orthology K00232; E1.3.3.6, ACOX1, acyl-CoA oxidase
Gene Ontology GO:0003995; acyl-CoA dehydrogenase activity GO:0006635fatty acid beta-oxidation GO:0005777peroxisome GO:0003997acyl-CoA oxidase activity


Orthologs (automatic annotation)
TAIR AT4G16760 : acyl-CoA oxidase 1
RAP-DB (Rice) LOC_Os06g01390.1 : acyl-coenzyme A oxidase 1.2, peroxisomal, putative, expressed
MaizeGDB (Corn) Zm00025a049946 , Zm00025a050347
Brachypodium KQK20080
Barley HORVU2Hr1G031180.40 , HORVU2Hr1G031180.41 , HORVU2Hr1G031180.13 , HORVU2Hr1G031180.12 , HORVU2Hr1G031180.15 , HORVU2Hr1G031180.14 , HORVU2Hr1G031180.17 , HORVU2Hr1G031180.16 , HORVU2Hr1G031180.39 , HORVU2Hr1G031180.38 , HORVU2Hr1G031180.37 , HORVU2Hr1G031180.36 , HORVU2Hr1G031180.35 , HORVU2Hr1G031180.34 , HORVU7Hr1G000580.12 , HORVU7Hr1G000580.13 , HORVU7Hr1G000580.10 , HORVU7Hr1G000580.11 , HORVU2Hr1G031180.28 , HORVU2Hr1G031180.29 , HORVU2Hr1G031180.24 , HORVU2Hr1G031180.25 , HORVU2Hr1G031180.26 , HORVU2Hr1G031180.27 , HORVU2Hr1G031180.20 , HORVU2Hr1G031180.21 , HORVU2Hr1G031180.22 , HORVU2Hr1G031180.23 , HORVU5Hr1G006930.4 , HORVU5Hr1G006930.1 , HORVU5Hr1G006930.3 , HORVU5Hr1G006930.2 , HORVU2Hr1G031180.5 , HORVU2Hr1G031180.4 , HORVU2Hr1G031180.7 , HORVU2Hr1G031180.6 , HORVU2Hr1G031180.1 , HORVU2Hr1G031180.3 , HORVU2Hr1G031180.2 , HORVU2Hr1G031180.9 , HORVU2Hr1G031180.8 , HORVU2Hr1G031180.10 , HORVU2Hr1G031180.19 , HORVU2Hr1G031180.18 , HORVU2Hr1G031180.33 , HORVU2Hr1G031180.32 , HORVU2Hr1G031180.31 , HORVU2Hr1G031180.30 , HORVU2Hr1G031180.11 , HORVU7Hr1G000580.8 , HORVU7Hr1G000580.9 , HORVU7Hr1G000580.4 , HORVU7Hr1G000580.5 , HORVU7Hr1G000580.6 , HORVU7Hr1G000580.7 , HORVU7Hr1G000580.1 , HORVU7Hr1G000580.2 , HORVU7Hr1G000580.3
Wheat TraesCS7D02G004400 , TraesCS4A02G494700 , TraesCS7A02G003900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G533400 major facilitator superfamily domain-containing protein 5, putative, expressed -
2 Sobic.002G201600 methyltransferase, putative, expressed -
3 Sobic.005G051200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
4 Sobic.001G339700 expressed protein -
5 Sobic.002G414600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hypoxia-responsive family protein, putative, expressed -
6 Sobic.008G025600 cyclin-dependent kinase B1-1, putative, expressed K07760: cyclin-dependent kinase
7 Sobic.001G317200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.003G317100 expressed protein -
9 Sobic.006G137800 expressed protein -
10 Sobic.001G252300 pectinesterase, putative, expressed K01051: pectinesterase
11 Sobic.003G240600 VQ domain containing protein, putative, expressed -
12 Sobic.009G164600 ZOS1-14 - C2H2 zinc finger protein, expressed -
13 Sobic.008G050600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
14 Sobic.003G286600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
15 Sobic.009G035200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thioesterase family protein, putative, expressed -
16 Sobic.003G352300 triosephosphate isomerase(PubMedID : 27016024)@triosephosphate isomerase, cytosolic, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)
17 Sobic.002G416600 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.004G245500 expressed protein -
19 Sobic.009G063900 expressed protein -
20 Sobic.003G072300 triosephosphate isomerase(PubMedID : 27016024)@triosephosphate isomerase, cytosolic, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)


Gene co-expression network
sample Sobic010G001900 Sobic010G001900 Sobic001G533400 Sobic001G533400 Sobic010G001900--Sobic001G533400 Sobic002G201600 Sobic002G201600 Sobic010G001900--Sobic002G201600 Sobic005G051200 Sobic005G051200 Sobic010G001900--Sobic005G051200 Sobic001G339700 Sobic001G339700 Sobic010G001900--Sobic001G339700 Sobic002G414600 Sobic002G414600 Sobic010G001900--Sobic002G414600 Sobic008G025600 Sobic008G025600 Sobic010G001900--Sobic008G025600 Sobic001G317200 Sobic001G317200 Sobic010G001900--Sobic001G317200 Sobic003G317100 Sobic003G317100 Sobic010G001900--Sobic003G317100 Sobic006G137800 Sobic006G137800 Sobic010G001900--Sobic006G137800 Sobic001G533400--Sobic001G339700 Sobic001G533400--Sobic010G001900 Sobic001G119100 Sobic001G119100 Sobic001G533400--Sobic001G119100 Sobic001G533400--Sobic002G201600 Sobic001G533400--Sobic008G025600 Sobic004G205100 Sobic004G205100 Sobic001G533400--Sobic004G205100 Sobic005G091500 Sobic005G091500 Sobic001G533400--Sobic005G091500 Sobic001G119000 Sobic001G119000 Sobic001G533400--Sobic001G119000 Sobic001G252300 Sobic001G252300 Sobic001G533400--Sobic001G252300 Sobic002G201600--Sobic001G533400 Sobic002G201600--Sobic010G001900 Sobic002G201600--Sobic001G339700 Sobic002G201600--Sobic008G025600 Sobic009G120000 Sobic009G120000 Sobic002G201600--Sobic009G120000 Sobic002G201600--Sobic006G137800 Sobic010G209900 Sobic010G209900 Sobic002G201600--Sobic010G209900 Sobic004G273400 Sobic004G273400 Sobic002G201600--Sobic004G273400 Sobic002G416600 Sobic002G416600 Sobic002G201600--Sobic002G416600 Sobic005G051200--Sobic001G317200 Sobic009G035200 Sobic009G035200 Sobic005G051200--Sobic009G035200 Sobic008G050600 Sobic008G050600 Sobic005G051200--Sobic008G050600 Sobic005G051200--Sobic002G416600 Sobic009G164600 Sobic009G164600 Sobic005G051200--Sobic009G164600 Sobic003G345100 Sobic003G345100 Sobic005G051200--Sobic003G345100 Sobic003G286600 Sobic003G286600 Sobic005G051200--Sobic003G286600 Sobic005G063100 Sobic005G063100 Sobic005G051200--Sobic005G063100 Sobic005G051200--Sobic001G252300 Sobic001G339700--Sobic001G533400 Sobic001G339700--Sobic001G317200 Sobic007G145600 Sobic007G145600 Sobic001G339700--Sobic007G145600 Sobic010G084400 Sobic010G084400 Sobic001G339700--Sobic010G084400 Sobic003G252800 Sobic003G252800 Sobic001G339700--Sobic003G252800 Sobic006G099900 Sobic006G099900 Sobic001G339700--Sobic006G099900 Sobic001G339700--Sobic008G025600 Sobic005G101800 Sobic005G101800 Sobic001G339700--Sobic005G101800 Sobic005G084600 Sobic005G084600 Sobic001G339700--Sobic005G084600 Sobic002G414600--Sobic001G252300 Sobic009G183400 Sobic009G183400 Sobic002G414600--Sobic009G183400 Sobic001G097600 Sobic001G097600 Sobic002G414600--Sobic001G097600 Sobic002G393000 Sobic002G393000 Sobic002G414600--Sobic002G393000 Sobic001G119400 Sobic001G119400 Sobic002G414600--Sobic001G119400 Sobic009G008900 Sobic009G008900 Sobic002G414600--Sobic009G008900 Sobic002G414600--Sobic005G051200 Sobic006G173900 Sobic006G173900 Sobic002G414600--Sobic006G173900 Sobic006G275200 Sobic006G275200 Sobic002G414600--Sobic006G275200 Sobic008G025600--Sobic006G137800 Sobic008G025600--Sobic004G205100 Sobic008G025600--Sobic001G339700 Sobic008G025600--Sobic006G099900 Sobic002G200600 Sobic002G200600 Sobic008G025600--Sobic002G200600 Sobic003G417800 Sobic003G417800 Sobic008G025600--Sobic003G417800 Sobic008G025600--Sobic009G183400 Sobic007G227300 Sobic007G227300 Sobic008G025600--Sobic007G227300 Sobic007G184600 Sobic007G184600 Sobic008G025600--Sobic007G184600 Sobic001G317200--Sobic005G051200 Sobic001G317200--Sobic006G099900 Sobic001G317200--Sobic003G252800 Sobic001G317200--Sobic010G084400 Sobic001G317200--Sobic003G286600 Sobic001G317200--Sobic008G050600 Sobic003G240600 Sobic003G240600 Sobic001G317200--Sobic003G240600 Sobic001G317200--Sobic005G101800 Sobic001G317200--Sobic002G416600 Sobic003G317100--Sobic003G286600 Sobic003G317100--Sobic006G099900 Sobic006G084600 Sobic006G084600 Sobic003G317100--Sobic006G084600 Sobic004G221500 Sobic004G221500 Sobic003G317100--Sobic004G221500 Sobic003G352300 Sobic003G352300 Sobic003G317100--Sobic003G352300 Sobic005G045900 Sobic005G045900 Sobic003G317100--Sobic005G045900 Sobic001G435000 Sobic001G435000 Sobic003G317100--Sobic001G435000 Sobic010G044400 Sobic010G044400 Sobic003G317100--Sobic010G044400 Sobic004G229800 Sobic004G229800 Sobic003G317100--Sobic004G229800 Sobic009G159400 Sobic009G159400 Sobic006G137800--Sobic009G159400 Sobic006G137800--Sobic008G025600 Sobic004G321300 Sobic004G321300 Sobic006G137800--Sobic004G321300 Sobic001G140900 Sobic001G140900 Sobic006G137800--Sobic001G140900 Sobic006G137800--Sobic002G200600 Sobic001G038900 Sobic001G038900 Sobic006G137800--Sobic001G038900 Sobic006G137800--Sobic008G050600 Sobic006G159600 Sobic006G159600 Sobic006G137800--Sobic006G159600 Sobic006G137800--Sobic003G345100
Octagon: transcription factors


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