Gene annotation
Transcriptome id Sobic.002G201600.1
Synonym Sb02g024670
Functional annotation methyltransferase, putative, expressed
UniProt C5XCT4
Pfam PF03141
Panther DB PTHR10108 PTHR10108:SF776
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity


Orthologs (automatic annotation)
TAIR AT1G26850 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os09g24900.1 : methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a003448 , Zm00025a046979
Brachypodium KQJ90236 , KQJ90237 , PNT64566 , PNT64565 , PNT64564 , KQJ90238
Barley HORVU5Hr1G065680.1 , HORVU5Hr1G065680.2 , HORVU5Hr1G065680.3
Wheat TraesCS5B02G225500 , TraesCS3B02G427600 , TraesCS3B02G427600 , TraesCS3D02G389400 , TraesCS5D02G234300 , TraesCS5A02G226900 , TraesCS3A02G395800
Populus PNT15598


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G533400 major facilitator superfamily domain-containing protein 5, putative, expressed -
2 Sobic.010G001900 Long chain acyl-CoA oxidase(PubMedID : 18985313)@acyl-coenzyme A oxidase 1.2, peroxisomal, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
3 Sobic.001G339700 expressed protein -
4 Sobic.008G025600 cyclin-dependent kinase B1-1, putative, expressed K07760: cyclin-dependent kinase
5 Sobic.009G120000 - -
6 Sobic.006G137800 expressed protein -
7 Sobic.010G209900 phospholipase D. Active site motif family protein, expressed K16860: phospholipase D3/4
8 Sobic.004G273400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptide transporter, putative, expressed -
9 Sobic.002G416600 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.009G248100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.003G087300 nuclease PA3, putative, expressed -
12 Sobic.001G025300 hydrolase, alpha/beta fold family domain containing protein, expressed -
13 Sobic.005G051200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
14 Sobic.002G199650 - -
15 Sobic.001G025101 - -
16 Sobic.001G252300 pectinesterase, putative, expressed K01051: pectinesterase
17 Sobic.006G153100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
18 Sobic.001G070800 expressed protein -
19 Sobic.005G084600 ARGOS, putative, expressed -
20 Sobic.009G035200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thioesterase family protein, putative, expressed -


Gene co-expression network
sample Sobic002G201600 Sobic002G201600 Sobic001G533400 Sobic001G533400 Sobic002G201600--Sobic001G533400 Sobic010G001900 Sobic010G001900 Sobic002G201600--Sobic010G001900 Sobic001G339700 Sobic001G339700 Sobic002G201600--Sobic001G339700 Sobic008G025600 Sobic008G025600 Sobic002G201600--Sobic008G025600 Sobic009G120000 Sobic009G120000 Sobic002G201600--Sobic009G120000 Sobic006G137800 Sobic006G137800 Sobic002G201600--Sobic006G137800 Sobic010G209900 Sobic010G209900 Sobic002G201600--Sobic010G209900 Sobic004G273400 Sobic004G273400 Sobic002G201600--Sobic004G273400 Sobic002G416600 Sobic002G416600 Sobic002G201600--Sobic002G416600 Sobic001G533400--Sobic001G339700 Sobic001G533400--Sobic010G001900 Sobic001G119100 Sobic001G119100 Sobic001G533400--Sobic001G119100 Sobic001G533400--Sobic002G201600 Sobic001G533400--Sobic008G025600 Sobic004G205100 Sobic004G205100 Sobic001G533400--Sobic004G205100 Sobic005G091500 Sobic005G091500 Sobic001G533400--Sobic005G091500 Sobic001G119000 Sobic001G119000 Sobic001G533400--Sobic001G119000 Sobic001G252300 Sobic001G252300 Sobic001G533400--Sobic001G252300 Sobic010G001900--Sobic001G533400 Sobic010G001900--Sobic002G201600 Sobic005G051200 Sobic005G051200 Sobic010G001900--Sobic005G051200 Sobic010G001900--Sobic001G339700 Sobic002G414600 Sobic002G414600 Sobic010G001900--Sobic002G414600 Sobic010G001900--Sobic008G025600 Sobic001G317200 Sobic001G317200 Sobic010G001900--Sobic001G317200 Sobic003G317100 Sobic003G317100 Sobic010G001900--Sobic003G317100 Sobic010G001900--Sobic006G137800 Sobic001G339700--Sobic001G533400 Sobic001G339700--Sobic001G317200 Sobic007G145600 Sobic007G145600 Sobic001G339700--Sobic007G145600 Sobic010G084400 Sobic010G084400 Sobic001G339700--Sobic010G084400 Sobic003G252800 Sobic003G252800 Sobic001G339700--Sobic003G252800 Sobic006G099900 Sobic006G099900 Sobic001G339700--Sobic006G099900 Sobic001G339700--Sobic008G025600 Sobic005G101800 Sobic005G101800 Sobic001G339700--Sobic005G101800 Sobic005G084600 Sobic005G084600 Sobic001G339700--Sobic005G084600 Sobic008G025600--Sobic006G137800 Sobic008G025600--Sobic004G205100 Sobic008G025600--Sobic001G339700 Sobic008G025600--Sobic006G099900 Sobic002G200600 Sobic002G200600 Sobic008G025600--Sobic002G200600 Sobic003G417800 Sobic003G417800 Sobic008G025600--Sobic003G417800 Sobic009G183400 Sobic009G183400 Sobic008G025600--Sobic009G183400 Sobic007G227300 Sobic007G227300 Sobic008G025600--Sobic007G227300 Sobic007G184600 Sobic007G184600 Sobic008G025600--Sobic007G184600 Sobic004G166700 Sobic004G166700 Sobic009G120000--Sobic004G166700 Sobic007G141500 Sobic007G141500 Sobic009G120000--Sobic007G141500 Sobic009G120000--Sobic005G051200 Sobic009G120000--Sobic001G317200 Sobic009G120000--Sobic005G084600 Sobic003G117600 Sobic003G117600 Sobic009G120000--Sobic003G117600 Sobic006G092500 Sobic006G092500 Sobic009G120000--Sobic006G092500 Sobic001G243600 Sobic001G243600 Sobic009G120000--Sobic001G243600 Sobic005G213200 Sobic005G213200 Sobic009G120000--Sobic005G213200 Sobic009G159400 Sobic009G159400 Sobic006G137800--Sobic009G159400 Sobic006G137800--Sobic008G025600 Sobic004G321300 Sobic004G321300 Sobic006G137800--Sobic004G321300 Sobic001G140900 Sobic001G140900 Sobic006G137800--Sobic001G140900 Sobic006G137800--Sobic002G200600 Sobic001G038900 Sobic001G038900 Sobic006G137800--Sobic001G038900 Sobic008G050600 Sobic008G050600 Sobic006G137800--Sobic008G050600 Sobic006G159600 Sobic006G159600 Sobic006G137800--Sobic006G159600 Sobic003G345100 Sobic003G345100 Sobic006G137800--Sobic003G345100 Sobic005G058800 Sobic005G058800 Sobic010G209900--Sobic005G058800 Sobic010G209900--Sobic001G339700 Sobic001G025300 Sobic001G025300 Sobic010G209900--Sobic001G025300 Sobic010G209900--Sobic005G084600 Sobic001G100700 Sobic001G100700 Sobic010G209900--Sobic001G100700 Sobic002G312900 Sobic002G312900 Sobic010G209900--Sobic002G312900 Sobic010G209900--Sobic009G120000 Sobic010G209900--Sobic001G533400 Sobic001G444400 Sobic001G444400 Sobic010G209900--Sobic001G444400 Sobic004G273400--Sobic001G243600 Sobic001G243500 Sobic001G243500 Sobic004G273400--Sobic001G243500 Sobic004G273400--Sobic001G100700 Sobic004G273400--Sobic005G213200 Sobic009G106800 Sobic009G106800 Sobic004G273400--Sobic009G106800 Sobic004G273400--Sobic001G444400 Sobic006G153100 Sobic006G153100 Sobic004G273400--Sobic006G153100 Sobic004G333150 Sobic004G333150 Sobic004G273400--Sobic004G333150 Sobic004G273400--Sobic007G141500 Sobic003G087300 Sobic003G087300 Sobic002G416600--Sobic003G087300 Sobic002G416600--Sobic005G051200 Sobic002G416600--Sobic001G317200 Sobic002G416600--Sobic001G025300 Sobic001G070800 Sobic001G070800 Sobic002G416600--Sobic001G070800 Sobic002G416600--Sobic004G166700 Sobic002G416600--Sobic008G050600 Sobic002G416600--Sobic001G252300 Sobic010G239300 Sobic010G239300 Sobic002G416600--Sobic010G239300
Octagon: transcription factors


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