Gene annotation
Transcriptome id Sobic.009G248100.2
Synonym Sb09g029890
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1Z5R561
Pfam -
Panther DB PTHR33929 PTHR33929:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g50730.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G027400 VQ domain containing protein, putative, expressed -
2 Sobic.003G321200 pectinesterase, putative, expressed K01051: pectinesterase
3 Sobic.001G325400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
4 Sobic.009G035200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thioesterase family protein, putative, expressed -
5 Sobic.009G229000 expressed protein -
6 Sobic.003G117600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@flowering promoting factor-like 1, putative, expressed -
7 Sobic.006G092500 expressed protein -
8 Sobic.009G111000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed K01051: pectinesterase
9 Sobic.006G039100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RALFL36 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
10 Sobic.001G462700 expressed protein -
11 Sobic.004G046200 sulfotransferase domain containing protein, expressed -
12 Sobic.009G231000 - -
13 Sobic.001G481000 expressed protein -
14 Sobic.001G476500 helix-loop-helix DNA-binding protein, putative, expressed -
15 Sobic.003G417800 down-regulated TF in developmental senescence(PubMedID : 27586543)@histone-like transcription factor and archaeal histone, putative, expressed -
16 Sobic.004G203700 ubiquitin family protein, putative, expressed -
17 Sobic.002G416600 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.001G139100 expressed protein -
19 Sobic.008G025600 cyclin-dependent kinase B1-1, putative, expressed K07760: cyclin-dependent kinase
20 Sobic.006G137800 expressed protein -


Gene co-expression network
sample Sobic009G248100 Sobic009G248100 Sobic003G027400 Sobic003G027400 Sobic009G248100--Sobic003G027400 Sobic003G321200 Sobic003G321200 Sobic009G248100--Sobic003G321200 Sobic001G325400 Sobic001G325400 Sobic009G248100--Sobic001G325400 Sobic009G035200 Sobic009G035200 Sobic009G248100--Sobic009G035200 Sobic009G229000 Sobic009G229000 Sobic009G248100--Sobic009G229000 Sobic003G117600 Sobic003G117600 Sobic009G248100--Sobic003G117600 Sobic006G092500 Sobic006G092500 Sobic009G248100--Sobic006G092500 Sobic009G111000 Sobic009G111000 Sobic009G248100--Sobic009G111000 Sobic006G039100 Sobic006G039100 Sobic009G248100--Sobic006G039100 Sobic003G160700 Sobic003G160700 Sobic003G027400--Sobic003G160700 Sobic006G249300 Sobic006G249300 Sobic003G027400--Sobic006G249300 Sobic003G027400--Sobic009G248100 Sobic010G221300 Sobic010G221300 Sobic003G027400--Sobic010G221300 Sobic001G481000 Sobic001G481000 Sobic003G027400--Sobic001G481000 Sobic005G113300 Sobic005G113300 Sobic003G027400--Sobic005G113300 Sobic002G387900 Sobic002G387900 Sobic003G027400--Sobic002G387900 Sobic003G084400 Sobic003G084400 Sobic003G027400--Sobic003G084400 Sobic002G200600 Sobic002G200600 Sobic003G027400--Sobic002G200600 Sobic003G321200--Sobic001G481000 Sobic001G435000 Sobic001G435000 Sobic003G321200--Sobic001G435000 Sobic003G417800 Sobic003G417800 Sobic003G321200--Sobic003G417800 Sobic003G321200--Sobic006G092500 Sobic003G321200--Sobic003G027400 Sobic010G259600 Sobic010G259600 Sobic003G321200--Sobic010G259600 Sobic004G166700 Sobic004G166700 Sobic003G321200--Sobic004G166700 Sobic004G100700 Sobic004G100700 Sobic003G321200--Sobic004G100700 Sobic005G099000 Sobic005G099000 Sobic003G321200--Sobic005G099000 Sobic001G325400--Sobic006G039100 Sobic001G325400--Sobic009G111000 Sobic002G125700 Sobic002G125700 Sobic001G325400--Sobic002G125700 Sobic001G462700 Sobic001G462700 Sobic001G325400--Sobic001G462700 Sobic009G077800 Sobic009G077800 Sobic001G325400--Sobic009G077800 Sobic002G017800 Sobic002G017800 Sobic001G325400--Sobic002G017800 Sobic009G231000 Sobic009G231000 Sobic001G325400--Sobic009G231000 Sobic007G087200 Sobic007G087200 Sobic001G325400--Sobic007G087200 Sobic001G325400--Sobic003G117600 Sobic005G051200 Sobic005G051200 Sobic009G035200--Sobic005G051200 Sobic009G035200--Sobic009G229000 Sobic008G050600 Sobic008G050600 Sobic009G035200--Sobic008G050600 Sobic002G414600 Sobic002G414600 Sobic009G035200--Sobic002G414600 Sobic008G136400 Sobic008G136400 Sobic009G035200--Sobic008G136400 Sobic003G345100 Sobic003G345100 Sobic009G035200--Sobic003G345100 Sobic005G063100 Sobic005G063100 Sobic009G035200--Sobic005G063100 Sobic009G035200--Sobic006G092500 Sobic001G317200 Sobic001G317200 Sobic009G035200--Sobic001G317200 Sobic009G229000--Sobic004G166700 Sobic009G229000--Sobic006G092500 Sobic001G139100 Sobic001G139100 Sobic009G229000--Sobic001G139100 Sobic009G229000--Sobic009G035200 Sobic009G229000--Sobic005G051200 Sobic009G229000--Sobic003G345100 Sobic001G169500 Sobic001G169500 Sobic009G229000--Sobic001G169500 Sobic009G229000--Sobic010G259600 Sobic009G229000--Sobic005G063100 Sobic006G277600 Sobic006G277600 Sobic003G117600--Sobic006G277600 Sobic007G141500 Sobic007G141500 Sobic003G117600--Sobic007G141500 Sobic003G117600--Sobic005G063100 Sobic003G117600--Sobic006G092500 Sobic005G206601 Sobic005G206601 Sobic003G117600--Sobic005G206601 Sobic006G153100 Sobic006G153100 Sobic003G117600--Sobic006G153100 Sobic003G117600--Sobic001G325400 Sobic002G354100 Sobic002G354100 Sobic003G117600--Sobic002G354100 Sobic005G091500 Sobic005G091500 Sobic003G117600--Sobic005G091500 Sobic001G476500 Sobic001G476500 Sobic006G092500--Sobic001G476500 Sobic009G183400 Sobic009G183400 Sobic006G092500--Sobic009G183400 Sobic006G092500--Sobic004G100700 Sobic004G205100 Sobic004G205100 Sobic006G092500--Sobic004G205100 Sobic006G092500--Sobic009G229000 Sobic006G092500--Sobic005G063100 Sobic003G352300 Sobic003G352300 Sobic006G092500--Sobic003G352300 Sobic006G092500--Sobic003G117600 Sobic006G092500--Sobic010G259600 Sobic009G111000--Sobic002G017800 Sobic002G176100 Sobic002G176100 Sobic009G111000--Sobic002G176100 Sobic001G367600 Sobic001G367600 Sobic009G111000--Sobic001G367600 Sobic003G417200 Sobic003G417200 Sobic009G111000--Sobic003G417200 Sobic009G111000--Sobic001G325400 Sobic003G426400 Sobic003G426400 Sobic009G111000--Sobic003G426400 Sobic002G055700 Sobic002G055700 Sobic009G111000--Sobic002G055700 Sobic001G500000 Sobic001G500000 Sobic009G111000--Sobic001G500000 Sobic003G319500 Sobic003G319500 Sobic009G111000--Sobic003G319500 Sobic006G039100--Sobic001G325400 Sobic006G039100--Sobic009G231000 Sobic006G039100--Sobic001G462700 Sobic004G189500 Sobic004G189500 Sobic006G039100--Sobic004G189500 Sobic003G087300 Sobic003G087300 Sobic006G039100--Sobic003G087300 Sobic002G416600 Sobic002G416600 Sobic006G039100--Sobic002G416600 Sobic002G366600 Sobic002G366600 Sobic006G039100--Sobic002G366600 Sobic004G148100 Sobic004G148100 Sobic006G039100--Sobic004G148100 Sobic006G039100--Sobic009G077800
Octagon: transcription factors


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