Gene annotation
Transcriptome id Sobic.010G051400.2,Sobic.010G051400.3,Sobic.010G051400.4,Sobic.010G051400.1
Synonym Sb10g004470
Functional annotation zinc finger protein, putative, expressed
UniProt A0A194YHE0 , A0A194YHD8 , A0A1W0VRH4 , A0A1W0VRI8
Pfam PF02891
Panther DB PTHR10782 PTHR10782:SF4
NCBI CDD KOG0311; Predicted E3 ubiquitin ligase
KEGG Orthology K04706; E3 SUMO-protein ligase PIAS1
Gene Ontology GO:0008270; zinc ion binding


Orthologs (automatic annotation)
TAIR AT5G41580 : RING/U-box superfamily protein
RAP-DB (Rice) LOC_Os06g06870.1 : zinc finger protein, putative, expressed
MaizeGDB (Corn) Zm00025a049918
Brachypodium KQK19469
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G269300 hydrolase, acting on carbon-nitrogen, putative, expressed -
2 Sobic.007G159200 PWWP domain containing protein, expressed -
3 Sobic.008G080500 expressed protein -
4 Sobic.001G051700 expressed protein -
5 Sobic.009G129600 ABTB1 - Armadillo repeats with a Bric-a-Brac, Tramtrack, Broad Complex BTB domain, expressed -
6 Sobic.009G003700 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
7 Sobic.007G183300 expressed protein -
8 Sobic.002G145800 flowering time control protein FCA, putative, expressed -
9 Sobic.010G077500 protein of unknown function DUF1296 domain containing protein, expressed -
10 Sobic.006G280100 SET domain containing protein, expressed -
11 Sobic.002G231300 CAMK_CAMK_like.38 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
12 Sobic.003G416700 homeobox domain containing protein, expressed -
13 Sobic.010G227000 pentatricopeptide, putative, expressed -
14 Sobic.003G062300 NF-X1-type zinc finger protein, putative, expressed K15683: NFXL1, NF-X1-type zinc finger protein NFXL1
15 Sobic.003G297500 glucosidase 2 subunit beta precursor, putative, expressed K08288: protein kinase C substrate 80K-H
16 Sobic.002G119600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
17 Sobic.003G362900 Transcription initiation factor TFIID subunit A containing protein, expressed K03126: transcription initiation factor TFIID subunit 12
18 Sobic.004G355800 expressed protein -
19 Sobic.009G260650 - -
20 Sobic.002G148400 histone-lysine N-methyltransferase, H3 lysine-4 specific ATX1, putative, expressed -


Gene co-expression network
sample Sobic010G051400 Sobic010G051400 Sobic010G269300 Sobic010G269300 Sobic010G051400--Sobic010G269300 Sobic007G159200 Sobic007G159200 Sobic010G051400--Sobic007G159200 Sobic008G080500 Sobic008G080500 Sobic010G051400--Sobic008G080500 Sobic001G051700 Sobic001G051700 Sobic010G051400--Sobic001G051700 Sobic009G129600 Sobic009G129600 Sobic010G051400--Sobic009G129600 Sobic009G003700 Sobic009G003700 Sobic010G051400--Sobic009G003700 Sobic007G183300 Sobic007G183300 Sobic010G051400--Sobic007G183300 Sobic002G145800 Sobic002G145800 Sobic010G051400--Sobic002G145800 Sobic010G077500 Sobic010G077500 Sobic010G051400--Sobic010G077500 Sobic007G125700 Sobic007G125700 Sobic010G269300--Sobic007G125700 Sobic002G430900 Sobic002G430900 Sobic010G269300--Sobic002G430900 Sobic002G263700 Sobic002G263700 Sobic010G269300--Sobic002G263700 Sobic001G123600 Sobic001G123600 Sobic010G269300--Sobic001G123600 Sobic003G360300 Sobic003G360300 Sobic010G269300--Sobic003G360300 Sobic010G269300--Sobic008G080500 Sobic010G236200 Sobic010G236200 Sobic010G269300--Sobic010G236200 Sobic010G279900 Sobic010G279900 Sobic010G269300--Sobic010G279900 Sobic009G032200 Sobic009G032200 Sobic010G269300--Sobic009G032200 Sobic007G159200--Sobic008G080500 Sobic001G248100 Sobic001G248100 Sobic007G159200--Sobic001G248100 Sobic006G280100 Sobic006G280100 Sobic007G159200--Sobic006G280100 Sobic007G159200--Sobic010G051400 Sobic004G355800 Sobic004G355800 Sobic007G159200--Sobic004G355800 Sobic002G425200 Sobic002G425200 Sobic007G159200--Sobic002G425200 Sobic010G262100 Sobic010G262100 Sobic007G159200--Sobic010G262100 Sobic001G300000 Sobic001G300000 Sobic007G159200--Sobic001G300000 Sobic009G007700 Sobic009G007700 Sobic007G159200--Sobic009G007700 Sobic008G080500--Sobic007G159200 Sobic008G080500--Sobic010G262100 Sobic008G080500--Sobic004G355800 Sobic006G112700 Sobic006G112700 Sobic008G080500--Sobic006G112700 Sobic002G079100 Sobic002G079100 Sobic008G080500--Sobic002G079100 Sobic005G200900 Sobic005G200900 Sobic008G080500--Sobic005G200900 Sobic008G080500--Sobic010G269300 Sobic003G299500 Sobic003G299500 Sobic008G080500--Sobic003G299500 Sobic002G235900 Sobic002G235900 Sobic008G080500--Sobic002G235900 Sobic003G416700 Sobic003G416700 Sobic001G051700--Sobic003G416700 Sobic001G051700--Sobic002G145800 Sobic006G267600 Sobic006G267600 Sobic001G051700--Sobic006G267600 Sobic002G154000 Sobic002G154000 Sobic001G051700--Sobic002G154000 Sobic006G261400 Sobic006G261400 Sobic001G051700--Sobic006G261400 Sobic006G224800 Sobic006G224800 Sobic001G051700--Sobic006G224800 Sobic001G051700--Sobic007G183300 Sobic010G275500 Sobic010G275500 Sobic001G051700--Sobic010G275500 Sobic003G062300 Sobic003G062300 Sobic001G051700--Sobic003G062300 Sobic008G058800 Sobic008G058800 Sobic009G129600--Sobic008G058800 Sobic009G129600--Sobic010G077500 Sobic001G346700 Sobic001G346700 Sobic009G129600--Sobic001G346700 Sobic006G248500 Sobic006G248500 Sobic009G129600--Sobic006G248500 Sobic009G040800 Sobic009G040800 Sobic009G129600--Sobic009G040800 Sobic002G063900 Sobic002G063900 Sobic009G129600--Sobic002G063900 Sobic008G100100 Sobic008G100100 Sobic009G129600--Sobic008G100100 Sobic002G357100 Sobic002G357100 Sobic009G129600--Sobic002G357100 Sobic002G148400 Sobic002G148400 Sobic009G129600--Sobic002G148400 Sobic007G145400 Sobic007G145400 Sobic009G003700--Sobic007G145400 Sobic003G050900 Sobic003G050900 Sobic009G003700--Sobic003G050900 Sobic009G003700--Sobic001G248100 Sobic001G097500 Sobic001G097500 Sobic009G003700--Sobic001G097500 Sobic001G118200 Sobic001G118200 Sobic009G003700--Sobic001G118200 Sobic005G110499 Sobic005G110499 Sobic009G003700--Sobic005G110499 Sobic004G053500 Sobic004G053500 Sobic009G003700--Sobic004G053500 Sobic004G147500 Sobic004G147500 Sobic009G003700--Sobic004G147500 Sobic002G340900 Sobic002G340900 Sobic009G003700--Sobic002G340900 Sobic005G200800 Sobic005G200800 Sobic007G183300--Sobic005G200800 Sobic007G183300--Sobic002G145800 Sobic007G183300--Sobic003G416700 Sobic003G214600 Sobic003G214600 Sobic007G183300--Sobic003G214600 Sobic007G183300--Sobic010G279900 Sobic007G183300--Sobic002G154000 Sobic005G220000 Sobic005G220000 Sobic007G183300--Sobic005G220000 Sobic007G168300 Sobic007G168300 Sobic007G183300--Sobic007G168300 Sobic007G183300--Sobic001G051700 Sobic006G269800 Sobic006G269800 Sobic002G145800--Sobic006G269800 Sobic002G145800--Sobic003G416700 Sobic002G145800--Sobic007G183300 Sobic001G087600 Sobic001G087600 Sobic002G145800--Sobic001G087600 Sobic002G145800--Sobic001G051700 Sobic002G145800--Sobic003G062300 Sobic008G147200 Sobic008G147200 Sobic002G145800--Sobic008G147200 Sobic001G023000 Sobic001G023000 Sobic002G145800--Sobic001G023000 Sobic010G186600 Sobic010G186600 Sobic002G145800--Sobic010G186600 Sobic001G042200 Sobic001G042200 Sobic010G077500--Sobic001G042200 Sobic006G049100 Sobic006G049100 Sobic010G077500--Sobic006G049100 Sobic004G345400 Sobic004G345400 Sobic010G077500--Sobic004G345400 Sobic007G187600 Sobic007G187600 Sobic010G077500--Sobic007G187600 Sobic003G212900 Sobic003G212900 Sobic010G077500--Sobic003G212900 Sobic010G077500--Sobic008G058800 Sobic007G056500 Sobic007G056500 Sobic010G077500--Sobic007G056500 Sobic010G077500--Sobic002G063900 Sobic010G077500--Sobic009G129600
Octagon: transcription factors


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