Gene annotation
Transcriptome id Sobic.009G007700.1
Synonym Sb09g000880
Functional annotation expressed protein
UniProt C5YYD8
Pfam -
Panther DB PTHR33065 PTHR33065:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os09g03210.1 : expressed protein
MaizeGDB (Corn) Zm00025a037280 , Zm00025a037254 , Zm00025a037255
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G007700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G209400 expressed protein -
2 Sobic.010G085200 mediator of RNA polymerase II transcription subunit 6, putative, expressed K15128: mediator of RNA polymerase II transcription subunit 6
3 Sobic.003G127500 expressed protein -
4 Sobic.004G155600 dnaJ domain containing protein, expressed -
5 Sobic.004G034700 cleavage and polyadenylation specificity factor, putative, expressed K12830: SF3B3, SAP130, splicing factor 3B subunit 3
6 Sobic.006G210000 zinc finger domain, LSD1 subclass family protein, expressed -
7 Sobic.002G412700 histone-arginine methyltransferase CARM1, putative, expressed K05931: CARM1, type I protein arginine methyltransferase
8 Sobic.008G080500 expressed protein -
9 Sobic.002G357100 SUMO-activating enzyme subunit 2, putative, expressed K10685: UBLE1B, SAE2, ubiquitin-like 1-activating enzyme E1 B
10 Sobic.004G355800 expressed protein -
11 Sobic.001G248100 histone acetyltransferase GCN5, putative, expressed K06062: PCAF, KAT2, histone acetyltransferase
12 Sobic.006G112700 ATPOT1, putative, expressed -
13 Sobic.007G159200 PWWP domain containing protein, expressed -
14 Sobic.006G272200 cleavage and polyadenylation specificity factor subunit 5, putative, expressed K14397: NUDT21, CPSF5, cleavage and polyadenylation specificity factor subunit 5
15 Sobic.007G011600 KH domain-containing protein, putative, expressed K13210: far upstream element-binding protein
16 Sobic.006G271700 L-asparaginase precursor protein, putative, expressed K08657: taspase, threonine aspartase, 1
17 Sobic.006G067600 histone deacetylase, putative, expressed K06067: histone deacetylase 1/2
18 Sobic.005G200900 SCC3, putative, expressed K06671: STAG1_2, SCC3, cohesin complex subunit SA-1/2
19 Sobic.001G020000 metallo-beta-lactamase, putative, expressed K14402: CPSF2, cleavage and polyadenylation specificity factor subunit 2
20 Sobic.001G002600 expressed protein -


Gene co-expression network
sample Sobic009G007700 Sobic009G007700 Sobic003G209400 Sobic003G209400 Sobic009G007700--Sobic003G209400 Sobic010G085200 Sobic010G085200 Sobic009G007700--Sobic010G085200 Sobic003G127500 Sobic003G127500 Sobic009G007700--Sobic003G127500 Sobic004G155600 Sobic004G155600 Sobic009G007700--Sobic004G155600 Sobic004G034700 Sobic004G034700 Sobic009G007700--Sobic004G034700 Sobic006G210000 Sobic006G210000 Sobic009G007700--Sobic006G210000 Sobic002G412700 Sobic002G412700 Sobic009G007700--Sobic002G412700 Sobic008G080500 Sobic008G080500 Sobic009G007700--Sobic008G080500 Sobic002G357100 Sobic002G357100 Sobic009G007700--Sobic002G357100 Sobic003G209400--Sobic009G007700 Sobic003G209400--Sobic002G412700 Sobic006G112700 Sobic006G112700 Sobic003G209400--Sobic006G112700 Sobic003G209400--Sobic010G085200 Sobic003G209400--Sobic008G080500 Sobic007G097400 Sobic007G097400 Sobic003G209400--Sobic007G097400 Sobic003G209400--Sobic004G034700 Sobic008G017100 Sobic008G017100 Sobic003G209400--Sobic008G017100 Sobic002G356600 Sobic002G356600 Sobic003G209400--Sobic002G356600 Sobic005G220000 Sobic005G220000 Sobic010G085200--Sobic005G220000 Sobic010G085200--Sobic002G412700 Sobic006G233000 Sobic006G233000 Sobic010G085200--Sobic006G233000 Sobic010G085200--Sobic009G007700 Sobic010G279700 Sobic010G279700 Sobic010G085200--Sobic010G279700 Sobic010G239800 Sobic010G239800 Sobic010G085200--Sobic010G239800 Sobic007G011600 Sobic007G011600 Sobic010G085200--Sobic007G011600 Sobic003G314700 Sobic003G314700 Sobic010G085200--Sobic003G314700 Sobic010G085200--Sobic003G209400 Sobic003G127500--Sobic009G007700 Sobic003G127500--Sobic002G357100 Sobic003G127500--Sobic006G210000 Sobic004G355800 Sobic004G355800 Sobic003G127500--Sobic004G355800 Sobic003G127500--Sobic008G080500 Sobic004G285000 Sobic004G285000 Sobic003G127500--Sobic004G285000 Sobic006G067600 Sobic006G067600 Sobic003G127500--Sobic006G067600 Sobic002G177500 Sobic002G177500 Sobic003G127500--Sobic002G177500 Sobic007G159200 Sobic007G159200 Sobic003G127500--Sobic007G159200 Sobic006G014100 Sobic006G014100 Sobic004G155600--Sobic006G014100 Sobic006G270600 Sobic006G270600 Sobic004G155600--Sobic006G270600 Sobic006G080400 Sobic006G080400 Sobic004G155600--Sobic006G080400 Sobic004G155600--Sobic004G355800 Sobic002G425500 Sobic002G425500 Sobic004G155600--Sobic002G425500 Sobic006G118700 Sobic006G118700 Sobic004G155600--Sobic006G118700 Sobic004G155600--Sobic006G210000 Sobic002G145800 Sobic002G145800 Sobic004G155600--Sobic002G145800 Sobic001G002600 Sobic001G002600 Sobic004G155600--Sobic001G002600 Sobic001G451300 Sobic001G451300 Sobic004G034700--Sobic001G451300 Sobic004G034700--Sobic002G412700 Sobic001G536000 Sobic001G536000 Sobic004G034700--Sobic001G536000 Sobic010G053600 Sobic010G053600 Sobic004G034700--Sobic010G053600 Sobic004G256500 Sobic004G256500 Sobic004G034700--Sobic004G256500 Sobic006G036100 Sobic006G036100 Sobic004G034700--Sobic006G036100 Sobic001G020000 Sobic001G020000 Sobic004G034700--Sobic001G020000 Sobic010G138900 Sobic010G138900 Sobic004G034700--Sobic010G138900 Sobic001G248100 Sobic001G248100 Sobic004G034700--Sobic001G248100 Sobic010G001100 Sobic010G001100 Sobic006G210000--Sobic010G001100 Sobic003G293200 Sobic003G293200 Sobic006G210000--Sobic003G293200 Sobic004G156500 Sobic004G156500 Sobic006G210000--Sobic004G156500 Sobic010G065300 Sobic010G065300 Sobic006G210000--Sobic010G065300 Sobic006G210000--Sobic004G355800 Sobic007G031600 Sobic007G031600 Sobic006G210000--Sobic007G031600 Sobic008G100100 Sobic008G100100 Sobic006G210000--Sobic008G100100 Sobic006G052300 Sobic006G052300 Sobic006G210000--Sobic006G052300 Sobic005G191900 Sobic005G191900 Sobic006G210000--Sobic005G191900 Sobic002G412700--Sobic001G248100 Sobic003G405500 Sobic003G405500 Sobic002G412700--Sobic003G405500 Sobic002G412700--Sobic003G314700 Sobic002G412700--Sobic004G034700 Sobic002G412700--Sobic003G209400 Sobic007G047600 Sobic007G047600 Sobic002G412700--Sobic007G047600 Sobic002G412700--Sobic010G085200 Sobic002G119600 Sobic002G119600 Sobic002G412700--Sobic002G119600 Sobic010G139500 Sobic010G139500 Sobic002G412700--Sobic010G139500 Sobic008G080500--Sobic007G159200 Sobic010G262100 Sobic010G262100 Sobic008G080500--Sobic010G262100 Sobic008G080500--Sobic004G355800 Sobic008G080500--Sobic006G112700 Sobic002G079100 Sobic002G079100 Sobic008G080500--Sobic002G079100 Sobic005G200900 Sobic005G200900 Sobic008G080500--Sobic005G200900 Sobic010G269300 Sobic010G269300 Sobic008G080500--Sobic010G269300 Sobic003G299500 Sobic003G299500 Sobic008G080500--Sobic003G299500 Sobic002G235900 Sobic002G235900 Sobic008G080500--Sobic002G235900 Sobic002G357100--Sobic004G156500 Sobic002G357100--Sobic006G067600 Sobic002G357100--Sobic006G210000 Sobic009G129600 Sobic009G129600 Sobic002G357100--Sobic009G129600 Sobic007G183300 Sobic007G183300 Sobic002G357100--Sobic007G183300 Sobic007G091600 Sobic007G091600 Sobic002G357100--Sobic007G091600 Sobic009G151200 Sobic009G151200 Sobic002G357100--Sobic009G151200 Sobic002G357100--Sobic008G100100 Sobic004G129300 Sobic004G129300 Sobic002G357100--Sobic004G129300
Octagon: transcription factors


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