Gene annotation
Transcriptome id Sobic.001G063800.1,Sobic.001G063800.2
Synonym Sb01g005800
Functional annotation ML domain protein, putative, expressed
UniProt C5WY54 , A0A1Z5S4L5
Pfam PF02221
Panther DB PTHR11306 PTHR11306:SF12
NCBI CDD KOG4680; Uncharacterized conserved protein, contains ML domain
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G11780 : MD-2-related lipid recognition domain-containing protein / ML domain-containing protein
RAP-DB (Rice) LOC_Os03g57420.1 : ML domain protein, putative, expressed
MaizeGDB (Corn) Zm00025a008485
Brachypodium KQK12840 , KQK12839
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G175600 tetratricopeptide repeat domain containing protein, expressed -
2 Sobic.008G011300 GIY-YIG catalytic domain containing protein, putative, expressed K15078: structure-specific endonuclease subunit SLX1
3 Sobic.003G218801 - -
4 Sobic.001G296400 palmitoyl-protein thioesterase 1 precursor, putative, expressed K01074: palmitoyl-protein thioesterase
5 Sobic.010G204900 formamidopyrimidine-DNA glycosylase, putative, expressed K10563: mutM, formamidopyrimidine-DNA glycosylase
6 Sobic.001G250700 expressed protein -
7 Sobic.003G265500 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
8 Sobic.001G032200 transporter, major facilitator superfamily domain containing protein, expressed -
9 Sobic.002G072300 5-nucleotidase surE, putative, expressed K03787: 5'-nucleotidase
10 Sobic.008G000400 GHMP kinases ATP-binding protein, putative, expressed K16190: glucuronokinase
11 Sobic.003G174800 - -
12 Sobic.003G071600 3-oxo-5-alpha-steroid 4-dehydrogenase, putative, expressed K10258: TER, TSC13, very-long-chain enoyl-CoA reductase
13 Sobic.006G225100 OsFBDUF17 - F-box and DUF domain containing protein, expressed -
14 Sobic.001G306700 PPR repeat domain containing protein, putative, expressed -
15 Sobic.007G210000 ribosomal L18p/L5e family protein, expressed -
16 Sobic.007G211800 kinase, pfkB family, putative, expressed -
17 Sobic.007G206100 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
18 Sobic.001G201966 - -
19 Sobic.001G495400 PPR repeat domain containing protein, putative, expressed -
20 Sobic.009G029500 cation efflux family protein, putative, expressed K14689: SLC30A2, solute carrier family 30 (zinc transporter), member 2


Gene co-expression network
sample Sobic001G063800 Sobic001G063800 Sobic004G175600 Sobic004G175600 Sobic001G063800--Sobic004G175600 Sobic008G011300 Sobic008G011300 Sobic001G063800--Sobic008G011300 Sobic003G218801 Sobic003G218801 Sobic001G063800--Sobic003G218801 Sobic001G296400 Sobic001G296400 Sobic001G063800--Sobic001G296400 Sobic010G204900 Sobic010G204900 Sobic001G063800--Sobic010G204900 Sobic001G250700 Sobic001G250700 Sobic001G063800--Sobic001G250700 Sobic003G265500 Sobic003G265500 Sobic001G063800--Sobic003G265500 Sobic001G032200 Sobic001G032200 Sobic001G063800--Sobic001G032200 Sobic002G072300 Sobic002G072300 Sobic001G063800--Sobic002G072300 Sobic004G175600--Sobic001G063800 Sobic004G175600--Sobic001G296400 Sobic007G095500 Sobic007G095500 Sobic004G175600--Sobic007G095500 Sobic003G174800 Sobic003G174800 Sobic004G175600--Sobic003G174800 Sobic004G208600 Sobic004G208600 Sobic004G175600--Sobic004G208600 Sobic004G225600 Sobic004G225600 Sobic004G175600--Sobic004G225600 Sobic001G428000 Sobic001G428000 Sobic004G175600--Sobic001G428000 Sobic004G019500 Sobic004G019500 Sobic004G175600--Sobic004G019500 Sobic007G203200 Sobic007G203200 Sobic004G175600--Sobic007G203200 Sobic008G011300--Sobic001G032200 Sobic007G211800 Sobic007G211800 Sobic008G011300--Sobic007G211800 Sobic008G011300--Sobic010G204900 Sobic001G478600 Sobic001G478600 Sobic008G011300--Sobic001G478600 Sobic008G011300--Sobic001G063800 Sobic001G495400 Sobic001G495400 Sobic008G011300--Sobic001G495400 Sobic010G221600 Sobic010G221600 Sobic008G011300--Sobic010G221600 Sobic002G189600 Sobic002G189600 Sobic008G011300--Sobic002G189600 Sobic002G388000 Sobic002G388000 Sobic008G011300--Sobic002G388000 Sobic003G218801--Sobic001G063800 Sobic007G206100 Sobic007G206100 Sobic003G218801--Sobic007G206100 Sobic003G218801--Sobic008G011300 Sobic003G218801--Sobic001G250700 Sobic009G156100 Sobic009G156100 Sobic003G218801--Sobic009G156100 Sobic005G025300 Sobic005G025300 Sobic003G218801--Sobic005G025300 Sobic003G218801--Sobic004G175600 Sobic010G055800 Sobic010G055800 Sobic003G218801--Sobic010G055800 Sobic001G373400 Sobic001G373400 Sobic003G218801--Sobic001G373400 Sobic003G071600 Sobic003G071600 Sobic001G296400--Sobic003G071600 Sobic001G296400--Sobic004G175600 Sobic001G296400--Sobic004G208600 Sobic006G216000 Sobic006G216000 Sobic001G296400--Sobic006G216000 Sobic001G296400--Sobic001G063800 Sobic003G420900 Sobic003G420900 Sobic001G296400--Sobic003G420900 Sobic007G171950 Sobic007G171950 Sobic001G296400--Sobic007G171950 Sobic008G173000 Sobic008G173000 Sobic001G296400--Sobic008G173000 Sobic001G384800 Sobic001G384800 Sobic001G296400--Sobic001G384800 Sobic010G204900--Sobic001G032200 Sobic001G025800 Sobic001G025800 Sobic010G204900--Sobic001G025800 Sobic003G267500 Sobic003G267500 Sobic010G204900--Sobic003G267500 Sobic010G100800 Sobic010G100800 Sobic010G204900--Sobic010G100800 Sobic003G120300 Sobic003G120300 Sobic010G204900--Sobic003G120300 Sobic004G130300 Sobic004G130300 Sobic010G204900--Sobic004G130300 Sobic010G204900--Sobic001G250700 Sobic004G003900 Sobic004G003900 Sobic010G204900--Sobic004G003900 Sobic005G117300 Sobic005G117300 Sobic010G204900--Sobic005G117300 Sobic001G155400 Sobic001G155400 Sobic001G250700--Sobic001G155400 Sobic010G237900 Sobic010G237900 Sobic001G250700--Sobic010G237900 Sobic009G228000 Sobic009G228000 Sobic001G250700--Sobic009G228000 Sobic010G145800 Sobic010G145800 Sobic001G250700--Sobic010G145800 Sobic001G248100 Sobic001G248100 Sobic001G250700--Sobic001G248100 Sobic009G107300 Sobic009G107300 Sobic001G250700--Sobic009G107300 Sobic008G000400 Sobic008G000400 Sobic001G250700--Sobic008G000400 Sobic001G250700--Sobic010G204900 Sobic006G039400 Sobic006G039400 Sobic001G250700--Sobic006G039400 Sobic003G225100 Sobic003G225100 Sobic003G265500--Sobic003G225100 Sobic005G184300 Sobic005G184300 Sobic003G265500--Sobic005G184300 Sobic003G085000 Sobic003G085000 Sobic003G265500--Sobic003G085000 Sobic001G424300 Sobic001G424300 Sobic003G265500--Sobic001G424300 Sobic003G265500--Sobic010G221600 Sobic004G307400 Sobic004G307400 Sobic003G265500--Sobic004G307400 Sobic004G065300 Sobic004G065300 Sobic003G265500--Sobic004G065300 Sobic002G353300 Sobic002G353300 Sobic003G265500--Sobic002G353300 Sobic001G104800 Sobic001G104800 Sobic003G265500--Sobic001G104800 Sobic001G032200--Sobic008G011300 Sobic001G032200--Sobic010G204900 Sobic001G032200--Sobic007G211800 Sobic001G032200--Sobic001G495400 Sobic004G162500 Sobic004G162500 Sobic001G032200--Sobic004G162500 Sobic009G160500 Sobic009G160500 Sobic001G032200--Sobic009G160500 Sobic001G346600 Sobic001G346600 Sobic001G032200--Sobic001G346600 Sobic002G138300 Sobic002G138300 Sobic001G032200--Sobic002G138300 Sobic001G032200--Sobic001G025800 Sobic003G113300 Sobic003G113300 Sobic002G072300--Sobic003G113300 Sobic009G260700 Sobic009G260700 Sobic002G072300--Sobic009G260700 Sobic006G103700 Sobic006G103700 Sobic002G072300--Sobic006G103700 Sobic006G170900 Sobic006G170900 Sobic002G072300--Sobic006G170900 Sobic002G014800 Sobic002G014800 Sobic002G072300--Sobic002G014800 Sobic003G085500 Sobic003G085500 Sobic002G072300--Sobic003G085500 Sobic005G178300 Sobic005G178300 Sobic002G072300--Sobic005G178300 Sobic003G005900 Sobic003G005900 Sobic002G072300--Sobic003G005900 Sobic001G533100 Sobic001G533100 Sobic002G072300--Sobic001G533100
Octagon: transcription factors


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