Gene annotation
Transcriptome id Sobic.007G211800.1
Synonym Sb07g027900
Functional annotation kinase, pfkB family, putative, expressed
UniProt C5YIT0
Pfam PF00294
Panther DB PTHR10584:SF190 PTHR10584
NCBI CDD KOG2855; Ribokinase KOG2947Carbohydrate kinase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G28706 : pfkB-like carbohydrate kinase family protein
RAP-DB (Rice) LOC_Os08g45180.1 : kinase, pfkB family, putative, expressed
MaizeGDB (Corn) Zm00025a005072
Brachypodium KQJ94715
Barley HORVU7Hr1G047500.1 , HORVU7Hr1G047500.3 , HORVU7Hr1G047500.2 , HORVU7Hr1G047500.5 , HORVU7Hr1G047500.4 , HORVU7Hr1G047500.6
Wheat TraesCS7B02G130200 , TraesCS7A02G231700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G032200 transporter, major facilitator superfamily domain containing protein, expressed -
2 Sobic.008G011300 GIY-YIG catalytic domain containing protein, putative, expressed K15078: structure-specific endonuclease subunit SLX1
3 Sobic.001G025800 pentatricopeptide, putative, expressed -
4 Sobic.010G204900 formamidopyrimidine-DNA glycosylase, putative, expressed K10563: mutM, formamidopyrimidine-DNA glycosylase
5 Sobic.001G495400 PPR repeat domain containing protein, putative, expressed -
6 Sobic.007G030800 expressed protein -
7 Sobic.008G097600 cyclin-T1-4, putative, expressed K15188: cyclin T
8 Sobic.010G221600 histidine triad family protein, putative, expressed K02503: HINT1, hinT, histidine triad (HIT) family protein
9 Sobic.007G090537 - K10956: protein transport protein SEC61 subunit alpha
10 Sobic.001G478600 uroporphyrinogen III synthase, putative, expressed K01719: hemD, uroporphyrinogen-III synthase
11 Sobic.004G019500 pentatricopeptide, putative, expressed -
12 Sobic.008G095400 - -
13 Sobic.001G003900 pentatricopeptide, putative, expressed -
14 Sobic.003G267500 expressed protein -
15 Sobic.006G047300 Minichromosome maintenance (MCM2/3/5) family protein("PubMedID : 26759170,PubMedID : 24597475")@EMB1688, putative, expressed K06949: rsgA, ribosome biogenesis GTPase / thiamine phosphate phosphatase
16 Sobic.005G143500 aspartyl/glutamyl-tRNA amidotransferase subunit B, putative, expressed K02434: gatB, aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B
17 Sobic.003G420900 S-formylglutathione hydrolase, putative, expressed K01070: frmB, ESD, S-formylglutathione hydrolase
18 Sobic.003G120300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
19 Sobic.004G003900 nitric oxide synthase 1, putative, expressed K13427: nitric-oxide synthase, plant
20 Sobic.010G095200 glutathione S-transferase, N-terminal domain containing protein, expressed -


Gene co-expression network
sample Sobic007G211800 Sobic007G211800 Sobic001G032200 Sobic001G032200 Sobic007G211800--Sobic001G032200 Sobic008G011300 Sobic008G011300 Sobic007G211800--Sobic008G011300 Sobic001G025800 Sobic001G025800 Sobic007G211800--Sobic001G025800 Sobic010G204900 Sobic010G204900 Sobic007G211800--Sobic010G204900 Sobic001G495400 Sobic001G495400 Sobic007G211800--Sobic001G495400 Sobic007G030800 Sobic007G030800 Sobic007G211800--Sobic007G030800 Sobic008G097600 Sobic008G097600 Sobic007G211800--Sobic008G097600 Sobic010G221600 Sobic010G221600 Sobic007G211800--Sobic010G221600 Sobic007G090537 Sobic007G090537 Sobic007G211800--Sobic007G090537 Sobic001G032200--Sobic008G011300 Sobic001G032200--Sobic010G204900 Sobic001G032200--Sobic007G211800 Sobic001G032200--Sobic001G495400 Sobic004G162500 Sobic004G162500 Sobic001G032200--Sobic004G162500 Sobic009G160500 Sobic009G160500 Sobic001G032200--Sobic009G160500 Sobic001G346600 Sobic001G346600 Sobic001G032200--Sobic001G346600 Sobic002G138300 Sobic002G138300 Sobic001G032200--Sobic002G138300 Sobic001G032200--Sobic001G025800 Sobic008G011300--Sobic001G032200 Sobic008G011300--Sobic007G211800 Sobic008G011300--Sobic010G204900 Sobic001G478600 Sobic001G478600 Sobic008G011300--Sobic001G478600 Sobic001G063800 Sobic001G063800 Sobic008G011300--Sobic001G063800 Sobic008G011300--Sobic001G495400 Sobic008G011300--Sobic010G221600 Sobic002G189600 Sobic002G189600 Sobic008G011300--Sobic002G189600 Sobic002G388000 Sobic002G388000 Sobic008G011300--Sobic002G388000 Sobic004G003900 Sobic004G003900 Sobic001G025800--Sobic004G003900 Sobic005G117300 Sobic005G117300 Sobic001G025800--Sobic005G117300 Sobic001G495200 Sobic001G495200 Sobic001G025800--Sobic001G495200 Sobic002G048200 Sobic002G048200 Sobic001G025800--Sobic002G048200 Sobic009G251000 Sobic009G251000 Sobic001G025800--Sobic009G251000 Sobic001G513800 Sobic001G513800 Sobic001G025800--Sobic001G513800 Sobic003G267500 Sobic003G267500 Sobic001G025800--Sobic003G267500 Sobic007G015300 Sobic007G015300 Sobic001G025800--Sobic007G015300 Sobic009G092900 Sobic009G092900 Sobic001G025800--Sobic009G092900 Sobic010G204900--Sobic001G032200 Sobic010G204900--Sobic001G025800 Sobic010G204900--Sobic003G267500 Sobic010G100800 Sobic010G100800 Sobic010G204900--Sobic010G100800 Sobic003G120300 Sobic003G120300 Sobic010G204900--Sobic003G120300 Sobic004G130300 Sobic004G130300 Sobic010G204900--Sobic004G130300 Sobic001G250700 Sobic001G250700 Sobic010G204900--Sobic001G250700 Sobic010G204900--Sobic004G003900 Sobic010G204900--Sobic005G117300 Sobic004G097900 Sobic004G097900 Sobic001G495400--Sobic004G097900 Sobic002G386900 Sobic002G386900 Sobic001G495400--Sobic002G386900 Sobic002G292800 Sobic002G292800 Sobic001G495400--Sobic002G292800 Sobic001G495400--Sobic001G032200 Sobic006G170900 Sobic006G170900 Sobic001G495400--Sobic006G170900 Sobic002G122100 Sobic002G122100 Sobic001G495400--Sobic002G122100 Sobic004G106250 Sobic004G106250 Sobic001G495400--Sobic004G106250 Sobic001G417500 Sobic001G417500 Sobic001G495400--Sobic001G417500 Sobic003G124600 Sobic003G124600 Sobic001G495400--Sobic003G124600 Sobic001G153300 Sobic001G153300 Sobic007G030800--Sobic001G153300 Sobic006G269800 Sobic006G269800 Sobic007G030800--Sobic006G269800 Sobic002G155000 Sobic002G155000 Sobic007G030800--Sobic002G155000 Sobic002G317100 Sobic002G317100 Sobic007G030800--Sobic002G317100 Sobic007G030800--Sobic007G211800 Sobic008G038600 Sobic008G038600 Sobic007G030800--Sobic008G038600 Sobic007G030800--Sobic001G417500 Sobic006G249500 Sobic006G249500 Sobic007G030800--Sobic006G249500 Sobic004G351800 Sobic004G351800 Sobic007G030800--Sobic004G351800 Sobic008G097600--Sobic002G292800 Sobic010G155600 Sobic010G155600 Sobic008G097600--Sobic010G155600 Sobic003G413100 Sobic003G413100 Sobic008G097600--Sobic003G413100 Sobic008G097600--Sobic001G032200 Sobic009G020100 Sobic009G020100 Sobic008G097600--Sobic009G020100 Sobic006G245900 Sobic006G245900 Sobic008G097600--Sobic006G245900 Sobic008G097600--Sobic007G211800 Sobic001G258900 Sobic001G258900 Sobic008G097600--Sobic001G258900 Sobic009G107300 Sobic009G107300 Sobic008G097600--Sobic009G107300 Sobic003G265500 Sobic003G265500 Sobic010G221600--Sobic003G265500 Sobic001G543700 Sobic001G543700 Sobic010G221600--Sobic001G543700 Sobic008G090900 Sobic008G090900 Sobic010G221600--Sobic008G090900 Sobic004G214400 Sobic004G214400 Sobic010G221600--Sobic004G214400 Sobic010G221600--Sobic004G003900 Sobic010G221600--Sobic001G478600 Sobic010G221600--Sobic002G189600 Sobic004G208600 Sobic004G208600 Sobic010G221600--Sobic004G208600 Sobic003G292300 Sobic003G292300 Sobic010G221600--Sobic003G292300 Sobic009G130800 Sobic009G130800 Sobic007G090537--Sobic009G130800 Sobic010G095200 Sobic010G095200 Sobic007G090537--Sobic010G095200 Sobic003G261200 Sobic003G261200 Sobic007G090537--Sobic003G261200 Sobic007G090537--Sobic003G292300 Sobic007G171800 Sobic007G171800 Sobic007G090537--Sobic007G171800 Sobic003G225100 Sobic003G225100 Sobic007G090537--Sobic003G225100 Sobic005G110481 Sobic005G110481 Sobic007G090537--Sobic005G110481 Sobic004G164100 Sobic004G164100 Sobic007G090537--Sobic004G164100 Sobic001G058400 Sobic001G058400 Sobic007G090537--Sobic001G058400
Octagon: transcription factors


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