Gene annotation
Transcriptome id Sobic.001G032200.2,Sobic.001G032200.1
Synonym
Functional annotation transporter, major facilitator superfamily domain containing protein, expressed
UniProt C5WUZ1 , A0A1Z5S446
Pfam PF07690
Panther DB PTHR23500 PTHR23500:SF159
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT5G59250 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os03g60820.1 : transporter, major facilitator superfamily domain containing protein, expressed
MaizeGDB (Corn) Zm00025a016414 , Zm00025a008839
Brachypodium PNT73884 , PNT73885 , PNT73883 , KQK12403
Barley HORVU5Hr1G114020.7 , HORVU5Hr1G114020.6 , HORVU5Hr1G114020.5 , HORVU5Hr1G114020.4 , HORVU5Hr1G114020.3 , HORVU5Hr1G114020.2
Wheat TraesCS5A02G484700 , TraesCS5B02G498000 , TraesCS5B02G498000 , TraesCS5D02G498200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G011300 GIY-YIG catalytic domain containing protein, putative, expressed K15078: structure-specific endonuclease subunit SLX1
2 Sobic.010G204900 formamidopyrimidine-DNA glycosylase, putative, expressed K10563: mutM, formamidopyrimidine-DNA glycosylase
3 Sobic.007G211800 kinase, pfkB family, putative, expressed -
4 Sobic.001G495400 PPR repeat domain containing protein, putative, expressed -
5 Sobic.004G162500 SAM domain family protein, expressed -
6 Sobic.009G160500 phosphoribosyl transferase, putative, expressed K00761: upp, uracil phosphoribosyltransferase
7 Sobic.001G346600 kinesin heavy chain isolog, putative, expressed -
8 Sobic.002G138300 expressed protein -
9 Sobic.001G025800 pentatricopeptide, putative, expressed -
10 Sobic.008G095400 - -
11 Sobic.010G098200 peroxidase family protein, expressed -
12 Sobic.003G267500 expressed protein -
13 Sobic.010G109400 acylphosphatase, putative, expressed K01512: acylphosphatase
14 Sobic.006G155100 expressed protein -
15 Sobic.003G092800 white-brown complex homolog protein 7, putative, expressed -
16 Sobic.001G415700 expressed protein -
17 Sobic.008G097600 cyclin-T1-4, putative, expressed K15188: cyclin T
18 Sobic.005G023800 expressed protein -
19 Sobic.008G090900 expressed protein -
20 Sobic.004G003900 nitric oxide synthase 1, putative, expressed K13427: nitric-oxide synthase, plant


Gene co-expression network
sample Sobic001G032200 Sobic001G032200 Sobic008G011300 Sobic008G011300 Sobic001G032200--Sobic008G011300 Sobic010G204900 Sobic010G204900 Sobic001G032200--Sobic010G204900 Sobic007G211800 Sobic007G211800 Sobic001G032200--Sobic007G211800 Sobic001G495400 Sobic001G495400 Sobic001G032200--Sobic001G495400 Sobic004G162500 Sobic004G162500 Sobic001G032200--Sobic004G162500 Sobic009G160500 Sobic009G160500 Sobic001G032200--Sobic009G160500 Sobic001G346600 Sobic001G346600 Sobic001G032200--Sobic001G346600 Sobic002G138300 Sobic002G138300 Sobic001G032200--Sobic002G138300 Sobic001G025800 Sobic001G025800 Sobic001G032200--Sobic001G025800 Sobic008G011300--Sobic001G032200 Sobic008G011300--Sobic007G211800 Sobic008G011300--Sobic010G204900 Sobic001G478600 Sobic001G478600 Sobic008G011300--Sobic001G478600 Sobic001G063800 Sobic001G063800 Sobic008G011300--Sobic001G063800 Sobic008G011300--Sobic001G495400 Sobic010G221600 Sobic010G221600 Sobic008G011300--Sobic010G221600 Sobic002G189600 Sobic002G189600 Sobic008G011300--Sobic002G189600 Sobic002G388000 Sobic002G388000 Sobic008G011300--Sobic002G388000 Sobic010G204900--Sobic001G032200 Sobic010G204900--Sobic001G025800 Sobic003G267500 Sobic003G267500 Sobic010G204900--Sobic003G267500 Sobic010G100800 Sobic010G100800 Sobic010G204900--Sobic010G100800 Sobic003G120300 Sobic003G120300 Sobic010G204900--Sobic003G120300 Sobic004G130300 Sobic004G130300 Sobic010G204900--Sobic004G130300 Sobic001G250700 Sobic001G250700 Sobic010G204900--Sobic001G250700 Sobic004G003900 Sobic004G003900 Sobic010G204900--Sobic004G003900 Sobic005G117300 Sobic005G117300 Sobic010G204900--Sobic005G117300 Sobic007G211800--Sobic001G032200 Sobic007G211800--Sobic008G011300 Sobic007G211800--Sobic001G025800 Sobic007G211800--Sobic010G204900 Sobic007G211800--Sobic001G495400 Sobic007G030800 Sobic007G030800 Sobic007G211800--Sobic007G030800 Sobic008G097600 Sobic008G097600 Sobic007G211800--Sobic008G097600 Sobic007G211800--Sobic010G221600 Sobic007G090537 Sobic007G090537 Sobic007G211800--Sobic007G090537 Sobic004G097900 Sobic004G097900 Sobic001G495400--Sobic004G097900 Sobic002G386900 Sobic002G386900 Sobic001G495400--Sobic002G386900 Sobic002G292800 Sobic002G292800 Sobic001G495400--Sobic002G292800 Sobic001G495400--Sobic001G032200 Sobic006G170900 Sobic006G170900 Sobic001G495400--Sobic006G170900 Sobic002G122100 Sobic002G122100 Sobic001G495400--Sobic002G122100 Sobic004G106250 Sobic004G106250 Sobic001G495400--Sobic004G106250 Sobic001G417500 Sobic001G417500 Sobic001G495400--Sobic001G417500 Sobic003G124600 Sobic003G124600 Sobic001G495400--Sobic003G124600 Sobic006G086800 Sobic006G086800 Sobic004G162500--Sobic006G086800 Sobic004G162500--Sobic001G032200 Sobic004G162500--Sobic002G189600 Sobic003G044300 Sobic003G044300 Sobic004G162500--Sobic003G044300 Sobic004G162500--Sobic009G160500 Sobic004G162500--Sobic002G138300 Sobic004G162500--Sobic008G011300 Sobic008G130800 Sobic008G130800 Sobic004G162500--Sobic008G130800 Sobic003G392600 Sobic003G392600 Sobic004G162500--Sobic003G392600 Sobic009G160500--Sobic002G386900 Sobic009G160500--Sobic001G032200 Sobic009G160500--Sobic002G189600 Sobic002G151000 Sobic002G151000 Sobic009G160500--Sobic002G151000 Sobic009G160500--Sobic004G162500 Sobic003G304400 Sobic003G304400 Sobic009G160500--Sobic003G304400 Sobic003G113300 Sobic003G113300 Sobic009G160500--Sobic003G113300 Sobic002G398700 Sobic002G398700 Sobic009G160500--Sobic002G398700 Sobic009G160500--Sobic001G495400 Sobic001G346600--Sobic005G117300 Sobic001G346600--Sobic004G003900 Sobic009G092900 Sobic009G092900 Sobic001G346600--Sobic009G092900 Sobic001G346600--Sobic001G025800 Sobic008G090900 Sobic008G090900 Sobic001G346600--Sobic008G090900 Sobic009G085200 Sobic009G085200 Sobic001G346600--Sobic009G085200 Sobic002G181132 Sobic002G181132 Sobic001G346600--Sobic002G181132 Sobic006G155100 Sobic006G155100 Sobic001G346600--Sobic006G155100 Sobic001G346600--Sobic001G032200 Sobic002G138300--Sobic001G032200 Sobic006G162400 Sobic006G162400 Sobic002G138300--Sobic006G162400 Sobic009G260700 Sobic009G260700 Sobic002G138300--Sobic009G260700 Sobic006G000900 Sobic006G000900 Sobic002G138300--Sobic006G000900 Sobic002G138300--Sobic006G170900 Sobic006G103700 Sobic006G103700 Sobic002G138300--Sobic006G103700 Sobic010G274800 Sobic010G274800 Sobic002G138300--Sobic010G274800 Sobic002G138300--Sobic004G162500 Sobic002G138300--Sobic003G044300 Sobic001G025800--Sobic004G003900 Sobic001G025800--Sobic005G117300 Sobic001G495200 Sobic001G495200 Sobic001G025800--Sobic001G495200 Sobic002G048200 Sobic002G048200 Sobic001G025800--Sobic002G048200 Sobic009G251000 Sobic009G251000 Sobic001G025800--Sobic009G251000 Sobic001G513800 Sobic001G513800 Sobic001G025800--Sobic001G513800 Sobic001G025800--Sobic003G267500 Sobic007G015300 Sobic007G015300 Sobic001G025800--Sobic007G015300 Sobic001G025800--Sobic009G092900
Octagon: transcription factors


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