Gene annotation
Transcriptome id Sobic.009G160500.1
Synonym Sb09g022320, PYRR, UPP
Functional annotation phosphoribosyl transferase, putative, expressed
UniProt C5YZ72
Pfam PF00156
Panther DB PTHR10285 PTHR10285:SF77
NCBI CDD KOG1017; Predicted uracil phosphoribosyltransferase
KEGG Orthology K00761; upp, uracil phosphoribosyltransferase
Gene Ontology GO:0009116; nucleoside metabolic process


Orthologs (automatic annotation)
TAIR AT3G53900 : uracil phosphoribosyltransferase
RAP-DB (Rice) LOC_Os05g38170.1 : phosphoribosyl transferase, putative, expressed
MaizeGDB (Corn) Zm00025a043889
Brachypodium KQK05941
Barley HORVU1Hr1G072750.7 , HORVU1Hr1G072750.5 , HORVU1Hr1G072750.2 , HORVU1Hr1G072750.9
Wheat TraesCS1B02G290800 , TraesCS1A02G281700
Populus PNT30625 , PNT30624 , PNT30626 , PNT30621 , PNT30620 , PNT30623 , PNT30622


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cDNA sequences
Sobic.009G160500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G386900 pseudouridylate synthase, putative, expressed K06176: truD, tRNA pseudouridine13 synthase
2 Sobic.001G032200 transporter, major facilitator superfamily domain containing protein, expressed -
3 Sobic.002G189600 expressed protein -
4 Sobic.002G151000 enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed K00208: enoyl-[acyl-carrier protein] reductase I
5 Sobic.004G162500 SAM domain family protein, expressed -
6 Sobic.003G304400 NLI interacting factor-like phosphatase, putative, expressed K17496: mitochondrial import inner membrane translocase subunit TIM50
7 Sobic.003G113300 expressed protein -
8 Sobic.002G398700 tim44-like domain containing protein, expressed K17426: large subunit ribosomal protein L45
9 Sobic.001G495400 PPR repeat domain containing protein, putative, expressed -
10 Sobic.006G012300 3-5 exonuclease domain-containing protein, putative, expressed -
11 Sobic.001G200200 tetratricopeptide repeat, putative, expressed -
12 Sobic.002G343200 homeodomain-like, putative, expressed -
13 Sobic.001G518200 - K06928: nucleoside-triphosphatase
14 Sobic.007G026200 heat shock protein DnaJ, putative, expressed -
15 Sobic.008G011300 GIY-YIG catalytic domain containing protein, putative, expressed K15078: structure-specific endonuclease subunit SLX1
16 Sobic.002G386600 heat shock protein DnaJ, putative, expressed -
17 Sobic.001G123600 domain of unknown function, DUF250 domain containing protein, expressed -
18 Sobic.004G030400 expressed protein -
19 Sobic.002G125800 phosphoglucomutase, putative, expressed -
20 Sobic.001G346600 kinesin heavy chain isolog, putative, expressed -


Gene co-expression network
sample Sobic009G160500 Sobic009G160500 Sobic002G386900 Sobic002G386900 Sobic009G160500--Sobic002G386900 Sobic001G032200 Sobic001G032200 Sobic009G160500--Sobic001G032200 Sobic002G189600 Sobic002G189600 Sobic009G160500--Sobic002G189600 Sobic002G151000 Sobic002G151000 Sobic009G160500--Sobic002G151000 Sobic004G162500 Sobic004G162500 Sobic009G160500--Sobic004G162500 Sobic003G304400 Sobic003G304400 Sobic009G160500--Sobic003G304400 Sobic003G113300 Sobic003G113300 Sobic009G160500--Sobic003G113300 Sobic002G398700 Sobic002G398700 Sobic009G160500--Sobic002G398700 Sobic001G495400 Sobic001G495400 Sobic009G160500--Sobic001G495400 Sobic002G386600 Sobic002G386600 Sobic002G386900--Sobic002G386600 Sobic004G097900 Sobic004G097900 Sobic002G386900--Sobic004G097900 Sobic001G123600 Sobic001G123600 Sobic002G386900--Sobic001G123600 Sobic006G191200 Sobic006G191200 Sobic002G386900--Sobic006G191200 Sobic007G034200 Sobic007G034200 Sobic002G386900--Sobic007G034200 Sobic001G051400 Sobic001G051400 Sobic002G386900--Sobic001G051400 Sobic001G200200 Sobic001G200200 Sobic002G386900--Sobic001G200200 Sobic002G239601 Sobic002G239601 Sobic002G386900--Sobic002G239601 Sobic002G292800 Sobic002G292800 Sobic002G386900--Sobic002G292800 Sobic008G011300 Sobic008G011300 Sobic001G032200--Sobic008G011300 Sobic010G204900 Sobic010G204900 Sobic001G032200--Sobic010G204900 Sobic007G211800 Sobic007G211800 Sobic001G032200--Sobic007G211800 Sobic001G032200--Sobic001G495400 Sobic001G032200--Sobic004G162500 Sobic001G032200--Sobic009G160500 Sobic001G346600 Sobic001G346600 Sobic001G032200--Sobic001G346600 Sobic002G138300 Sobic002G138300 Sobic001G032200--Sobic002G138300 Sobic001G025800 Sobic001G025800 Sobic001G032200--Sobic001G025800 Sobic010G221600 Sobic010G221600 Sobic002G189600--Sobic010G221600 Sobic007G026200 Sobic007G026200 Sobic002G189600--Sobic007G026200 Sobic001G478600 Sobic001G478600 Sobic002G189600--Sobic001G478600 Sobic002G189600--Sobic004G162500 Sobic002G189600--Sobic009G160500 Sobic003G292300 Sobic003G292300 Sobic002G189600--Sobic003G292300 Sobic002G189600--Sobic008G011300 Sobic001G441200 Sobic001G441200 Sobic002G189600--Sobic001G441200 Sobic007G211100 Sobic007G211100 Sobic002G189600--Sobic007G211100 Sobic002G151000--Sobic009G160500 Sobic002G151000--Sobic001G478600 Sobic002G408900 Sobic002G408900 Sobic002G151000--Sobic002G408900 Sobic002G151000--Sobic002G189600 Sobic009G254100 Sobic009G254100 Sobic002G151000--Sobic009G254100 Sobic002G151000--Sobic001G025800 Sobic008G152000 Sobic008G152000 Sobic002G151000--Sobic008G152000 Sobic002G151000--Sobic002G398700 Sobic002G151000--Sobic007G026200 Sobic006G086800 Sobic006G086800 Sobic004G162500--Sobic006G086800 Sobic004G162500--Sobic001G032200 Sobic004G162500--Sobic002G189600 Sobic003G044300 Sobic003G044300 Sobic004G162500--Sobic003G044300 Sobic004G162500--Sobic009G160500 Sobic004G162500--Sobic002G138300 Sobic004G162500--Sobic008G011300 Sobic008G130800 Sobic008G130800 Sobic004G162500--Sobic008G130800 Sobic003G392600 Sobic003G392600 Sobic004G162500--Sobic003G392600 Sobic002G364900 Sobic002G364900 Sobic003G304400--Sobic002G364900 Sobic003G397900 Sobic003G397900 Sobic003G304400--Sobic003G397900 Sobic003G304400--Sobic002G398700 Sobic001G474400 Sobic001G474400 Sobic003G304400--Sobic001G474400 Sobic002G150700 Sobic002G150700 Sobic003G304400--Sobic002G150700 Sobic010G192600 Sobic010G192600 Sobic003G304400--Sobic010G192600 Sobic003G202100 Sobic003G202100 Sobic003G304400--Sobic003G202100 Sobic001G015400 Sobic001G015400 Sobic003G304400--Sobic001G015400 Sobic006G265600 Sobic006G265600 Sobic003G304400--Sobic006G265600 Sobic009G122500 Sobic009G122500 Sobic003G113300--Sobic009G122500 Sobic002G296400 Sobic002G296400 Sobic003G113300--Sobic002G296400 Sobic002G014800 Sobic002G014800 Sobic003G113300--Sobic002G014800 Sobic003G113300--Sobic001G474400 Sobic001G030000 Sobic001G030000 Sobic003G113300--Sobic001G030000 Sobic005G114500 Sobic005G114500 Sobic003G113300--Sobic005G114500 Sobic007G030100 Sobic007G030100 Sobic003G113300--Sobic007G030100 Sobic003G393200 Sobic003G393200 Sobic003G113300--Sobic003G393200 Sobic003G113300--Sobic001G051400 Sobic002G398700--Sobic003G304400 Sobic006G106300 Sobic006G106300 Sobic002G398700--Sobic006G106300 Sobic010G091400 Sobic010G091400 Sobic002G398700--Sobic010G091400 Sobic002G398700--Sobic001G015400 Sobic002G398700--Sobic002G150700 Sobic005G026400 Sobic005G026400 Sobic002G398700--Sobic005G026400 Sobic002G398700--Sobic002G408900 Sobic002G398700--Sobic002G386600 Sobic002G398700--Sobic002G364900 Sobic001G495400--Sobic004G097900 Sobic001G495400--Sobic002G386900 Sobic001G495400--Sobic002G292800 Sobic001G495400--Sobic001G032200 Sobic006G170900 Sobic006G170900 Sobic001G495400--Sobic006G170900 Sobic002G122100 Sobic002G122100 Sobic001G495400--Sobic002G122100 Sobic004G106250 Sobic004G106250 Sobic001G495400--Sobic004G106250 Sobic001G417500 Sobic001G417500 Sobic001G495400--Sobic001G417500 Sobic003G124600 Sobic003G124600 Sobic001G495400--Sobic003G124600
Octagon: transcription factors


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