Gene annotation
Transcriptome id Sobic.001G518200.2
Synonym Sb01g048330
Functional annotation -
UniProt C5WZW6
Pfam PF13191
Panther DB PTHR20953
NCBI CDD -
KEGG Orthology K06928; nucleoside-triphosphatase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G66005 : Expressed protein
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a000429
Brachypodium PNT78262
Barley HORVU4Hr1G082200.23 , HORVU4Hr1G082200.24 , HORVU4Hr1G082200.27 , HORVU4Hr1G082200.26 , HORVU4Hr1G082200.43 , HORVU4Hr1G082200.45 , HORVU4Hr1G082200.44 , HORVU4Hr1G082200.38 , HORVU4Hr1G082200.39 , HORVU4Hr1G082200.34 , HORVU4Hr1G082200.32 , HORVU4Hr1G082200.33 , HORVU4Hr1G082200.30 , HORVU4Hr1G082200.31 , HORVU4Hr1G082200.41 , HORVU4Hr1G082200.40
Wheat TraesCS5A02G497300 , TraesCS4D02G321900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G231100 3-deoxy-manno-octulosonate cytidylyltransferase, putative, expressed K00979: 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase)
2 Sobic.002G072300 5-nucleotidase surE, putative, expressed K03787: 5'-nucleotidase
3 Sobic.009G063800 ATP10 protein, expressed K18192: mitochondrial ATPase complex subunit ATP10
4 Sobic.001G518600 fatty acid hydroxylase, putative, expressed K14424: plant 4alpha-monomethylsterol monooxygenase
5 Sobic.003G202100 Uncharacterized ACR, COG1565 containing protein, putative, expressed K18164: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7
6 Sobic.001G309200 fatty acid hydroxylase, putative, expressed K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase
7 Sobic.003G085500 signal peptidase complex subunit 3, putative, expressed K12948: SPCS3, signal peptidase complex subunit 3
8 Sobic.010G153400 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
9 Sobic.003G047900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@boron transporter protein, putative, expressed -
10 Sobic.004G354100 OsSigP5 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/His catalytic dyad, expressed K13280: SEC11, signal peptidase I
11 Sobic.009G160500 phosphoribosyl transferase, putative, expressed K00761: upp, uracil phosphoribosyltransferase
12 Sobic.001G440000 ras-related protein, putative, expressed K07933: Rab-like protein 3
13 Sobic.003G177700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide repeat containing protein, putative, expressed -
14 Sobic.005G031000 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed K00225: L-galactono-1,4-lactone dehydrogenase
15 Sobic.002G125800 phosphoglucomutase, putative, expressed -
16 Sobic.002G348400 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
17 Sobic.005G129201 - -
18 Sobic.001G229300 expressed protein -
19 Sobic.009G260700 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
20 Sobic.009G066200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -


Gene co-expression network
sample Sobic001G518200 Sobic001G518200 Sobic009G231100 Sobic009G231100 Sobic001G518200--Sobic009G231100 Sobic002G072300 Sobic002G072300 Sobic001G518200--Sobic002G072300 Sobic009G063800 Sobic009G063800 Sobic001G518200--Sobic009G063800 Sobic001G518600 Sobic001G518600 Sobic001G518200--Sobic001G518600 Sobic003G202100 Sobic003G202100 Sobic001G518200--Sobic003G202100 Sobic001G309200 Sobic001G309200 Sobic001G518200--Sobic001G309200 Sobic003G085500 Sobic003G085500 Sobic001G518200--Sobic003G085500 Sobic010G153400 Sobic010G153400 Sobic001G518200--Sobic010G153400 Sobic003G047900 Sobic003G047900 Sobic001G518200--Sobic003G047900 Sobic009G201900 Sobic009G201900 Sobic009G231100--Sobic009G201900 Sobic002G225000 Sobic002G225000 Sobic009G231100--Sobic002G225000 Sobic002G377300 Sobic002G377300 Sobic009G231100--Sobic002G377300 Sobic009G231100--Sobic001G518200 Sobic003G420900 Sobic003G420900 Sobic009G231100--Sobic003G420900 Sobic003G223000 Sobic003G223000 Sobic009G231100--Sobic003G223000 Sobic005G031000 Sobic005G031000 Sobic009G231100--Sobic005G031000 Sobic001G104300 Sobic001G104300 Sobic009G231100--Sobic001G104300 Sobic005G022000 Sobic005G022000 Sobic009G231100--Sobic005G022000 Sobic003G113300 Sobic003G113300 Sobic002G072300--Sobic003G113300 Sobic009G260700 Sobic009G260700 Sobic002G072300--Sobic009G260700 Sobic006G103700 Sobic006G103700 Sobic002G072300--Sobic006G103700 Sobic006G170900 Sobic006G170900 Sobic002G072300--Sobic006G170900 Sobic002G014800 Sobic002G014800 Sobic002G072300--Sobic002G014800 Sobic002G072300--Sobic003G085500 Sobic005G178300 Sobic005G178300 Sobic002G072300--Sobic005G178300 Sobic003G005900 Sobic003G005900 Sobic002G072300--Sobic003G005900 Sobic001G533100 Sobic001G533100 Sobic002G072300--Sobic001G533100 Sobic002G182000 Sobic002G182000 Sobic009G063800--Sobic002G182000 Sobic010G250000 Sobic010G250000 Sobic009G063800--Sobic010G250000 Sobic007G146600 Sobic007G146600 Sobic009G063800--Sobic007G146600 Sobic009G063800--Sobic001G309200 Sobic002G322400 Sobic002G322400 Sobic009G063800--Sobic002G322400 Sobic010G018900 Sobic010G018900 Sobic009G063800--Sobic010G018900 Sobic001G203600 Sobic001G203600 Sobic009G063800--Sobic001G203600 Sobic002G348400 Sobic002G348400 Sobic009G063800--Sobic002G348400 Sobic008G072500 Sobic008G072500 Sobic009G063800--Sobic008G072500 Sobic001G413100 Sobic001G413100 Sobic001G518600--Sobic001G413100 Sobic004G069400 Sobic004G069400 Sobic001G518600--Sobic004G069400 Sobic001G518600--Sobic001G309200 Sobic003G388700 Sobic003G388700 Sobic001G518600--Sobic003G388700 Sobic005G129201 Sobic005G129201 Sobic001G518600--Sobic005G129201 Sobic001G167500 Sobic001G167500 Sobic001G518600--Sobic001G167500 Sobic001G518600--Sobic008G072500 Sobic002G232400 Sobic002G232400 Sobic001G518600--Sobic002G232400 Sobic008G084100 Sobic008G084100 Sobic001G518600--Sobic008G084100 Sobic003G202100--Sobic009G260700 Sobic008G171400 Sobic008G171400 Sobic003G202100--Sobic008G171400 Sobic001G304000 Sobic001G304000 Sobic003G202100--Sobic001G304000 Sobic001G537100 Sobic001G537100 Sobic003G202100--Sobic001G537100 Sobic003G304400 Sobic003G304400 Sobic003G202100--Sobic003G304400 Sobic003G392600 Sobic003G392600 Sobic003G202100--Sobic003G392600 Sobic002G071100 Sobic002G071100 Sobic003G202100--Sobic002G071100 Sobic003G388900 Sobic003G388900 Sobic003G202100--Sobic003G388900 Sobic003G166500 Sobic003G166500 Sobic003G202100--Sobic003G166500 Sobic001G309200--Sobic002G348400 Sobic001G188000 Sobic001G188000 Sobic001G309200--Sobic001G188000 Sobic003G260600 Sobic003G260600 Sobic001G309200--Sobic003G260600 Sobic001G117900 Sobic001G117900 Sobic001G309200--Sobic001G117900 Sobic009G066200 Sobic009G066200 Sobic001G309200--Sobic009G066200 Sobic002G308000 Sobic002G308000 Sobic001G309200--Sobic002G308000 Sobic002G392400 Sobic002G392400 Sobic001G309200--Sobic002G392400 Sobic001G309200--Sobic010G153400 Sobic007G086600 Sobic007G086600 Sobic001G309200--Sobic007G086600 Sobic001G485300 Sobic001G485300 Sobic003G085500--Sobic001G485300 Sobic001G352800 Sobic001G352800 Sobic003G085500--Sobic001G352800 Sobic010G002800 Sobic010G002800 Sobic003G085500--Sobic010G002800 Sobic004G354100 Sobic004G354100 Sobic003G085500--Sobic004G354100 Sobic007G022700 Sobic007G022700 Sobic003G085500--Sobic007G022700 Sobic003G085500--Sobic002G392400 Sobic002G276800 Sobic002G276800 Sobic003G085500--Sobic002G276800 Sobic003G085500--Sobic003G388700 Sobic004G186100 Sobic004G186100 Sobic003G085500--Sobic004G186100 Sobic010G153400--Sobic002G348400 Sobic003G004800 Sobic003G004800 Sobic010G153400--Sobic003G004800 Sobic010G153400--Sobic002G392400 Sobic008G022400 Sobic008G022400 Sobic010G153400--Sobic008G022400 Sobic001G131900 Sobic001G131900 Sobic010G153400--Sobic001G131900 Sobic003G293400 Sobic003G293400 Sobic010G153400--Sobic003G293400 Sobic006G265800 Sobic006G265800 Sobic010G153400--Sobic006G265800 Sobic010G153400--Sobic001G117900 Sobic004G328100 Sobic004G328100 Sobic010G153400--Sobic004G328100 Sobic008G030600 Sobic008G030600 Sobic003G047900--Sobic008G030600 Sobic001G440000 Sobic001G440000 Sobic003G047900--Sobic001G440000 Sobic006G086800 Sobic006G086800 Sobic003G047900--Sobic006G086800 Sobic003G047900--Sobic001G518200 Sobic009G009300 Sobic009G009300 Sobic003G047900--Sobic009G009300 Sobic008G075200 Sobic008G075200 Sobic003G047900--Sobic008G075200 Sobic010G147500 Sobic010G147500 Sobic003G047900--Sobic010G147500 Sobic003G047900--Sobic009G231100 Sobic009G070700 Sobic009G070700 Sobic003G047900--Sobic009G070700
Octagon: transcription factors


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