Gene annotation
Transcriptome id Sobic.001G478600.1
Synonym UROS, Sb01g044830, ATUROS, ATDUF3, DUF3, HEMD
Functional annotation uroporphyrinogen III synthase, putative, expressed
UniProt C5WUW6
Pfam PF02602
Panther DB -
NCBI CDD KOG4132; Uroporphyrinogen III synthase UROS/HEM4
KEGG Orthology K01719; hemD, uroporphyrinogen-III synthase
Gene Ontology GO:0004852; uroporphyrinogen-III synthase activity


Orthologs (automatic annotation)
TAIR AT2G26540 : uroporphyrinogen-III synthase family protein
RAP-DB (Rice) LOC_Os03g08730.1 : uroporphyrinogen III synthase, putative, expressed
MaizeGDB (Corn) Zm00025a000979
Brachypodium -
Barley -
Wheat TraesCS4A02G002800 , TraesCS4D02G300900 , TraesCS4D02G300900
Populus -


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cDNA sequences
Sobic.001G478600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G433100 expressed protein -
2 Sobic.010G221600 histidine triad family protein, putative, expressed K02503: HINT1, hinT, histidine triad (HIT) family protein
3 Sobic.006G155100 expressed protein -
4 Sobic.008G090900 expressed protein -
5 Sobic.002G189600 expressed protein -
6 Sobic.004G003900 nitric oxide synthase 1, putative, expressed K13427: nitric-oxide synthase, plant
7 Sobic.001G025800 pentatricopeptide, putative, expressed -
8 Sobic.001G003900 pentatricopeptide, putative, expressed -
9 Sobic.008G011300 GIY-YIG catalytic domain containing protein, putative, expressed K15078: structure-specific endonuclease subunit SLX1
10 Sobic.001G401700 aminotransferase, classes I and II, domain containing protein, expressed K10206: LL-diaminopimelate aminotransferase
11 Sobic.001G543700 palmitoyl-protein thioesterase 1 precursor, putative, expressed K01074: palmitoyl-protein thioesterase
12 Sobic.007G165900 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05610: UCHL5, ubiquitin carboxyl-terminal hydrolase L5
13 Sobic.010G098200 peroxidase family protein, expressed -
14 Sobic.003G045300 cobalt ion transporter, putative, expressed -
15 Sobic.008G157200 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
16 Sobic.008G183700 cbbY protein-related, putative, expressed -
17 Sobic.010G204900 formamidopyrimidine-DNA glycosylase, putative, expressed K10563: mutM, formamidopyrimidine-DNA glycosylase
18 Sobic.004G275600 hydrolase, putative, expressed K01438: acetylornithine deacetylase
19 Sobic.009G124000 mesophyll envelope protein(PubMedID : 26976818)@expressed protein -
20 Sobic.003G345900 histone deacetylase, putative, expressed -


Gene co-expression network
sample Sobic001G478600 Sobic001G478600 Sobic001G433100 Sobic001G433100 Sobic001G478600--Sobic001G433100 Sobic010G221600 Sobic010G221600 Sobic001G478600--Sobic010G221600 Sobic006G155100 Sobic006G155100 Sobic001G478600--Sobic006G155100 Sobic008G090900 Sobic008G090900 Sobic001G478600--Sobic008G090900 Sobic002G189600 Sobic002G189600 Sobic001G478600--Sobic002G189600 Sobic004G003900 Sobic004G003900 Sobic001G478600--Sobic004G003900 Sobic001G025800 Sobic001G025800 Sobic001G478600--Sobic001G025800 Sobic001G003900 Sobic001G003900 Sobic001G478600--Sobic001G003900 Sobic008G011300 Sobic008G011300 Sobic001G478600--Sobic008G011300 Sobic001G401700 Sobic001G401700 Sobic001G433100--Sobic001G401700 Sobic007G126900 Sobic007G126900 Sobic001G433100--Sobic007G126900 Sobic001G433100--Sobic008G090900 Sobic006G088000 Sobic006G088000 Sobic001G433100--Sobic006G088000 Sobic001G433100--Sobic001G478600 Sobic004G214400 Sobic004G214400 Sobic001G433100--Sobic004G214400 Sobic001G433100--Sobic004G003900 Sobic001G293300 Sobic001G293300 Sobic001G433100--Sobic001G293300 Sobic003G345900 Sobic003G345900 Sobic001G433100--Sobic003G345900 Sobic003G265500 Sobic003G265500 Sobic010G221600--Sobic003G265500 Sobic001G543700 Sobic001G543700 Sobic010G221600--Sobic001G543700 Sobic010G221600--Sobic008G090900 Sobic010G221600--Sobic004G214400 Sobic010G221600--Sobic004G003900 Sobic010G221600--Sobic001G478600 Sobic010G221600--Sobic002G189600 Sobic004G208600 Sobic004G208600 Sobic010G221600--Sobic004G208600 Sobic003G292300 Sobic003G292300 Sobic010G221600--Sobic003G292300 Sobic006G155100--Sobic008G090900 Sobic006G155100--Sobic004G003900 Sobic006G155100--Sobic001G433100 Sobic010G098200 Sobic010G098200 Sobic006G155100--Sobic010G098200 Sobic006G155100--Sobic001G478600 Sobic004G171200 Sobic004G171200 Sobic006G155100--Sobic004G171200 Sobic002G356200 Sobic002G356200 Sobic006G155100--Sobic002G356200 Sobic001G346600 Sobic001G346600 Sobic006G155100--Sobic001G346600 Sobic002G298100 Sobic002G298100 Sobic006G155100--Sobic002G298100 Sobic008G090900--Sobic004G003900 Sobic009G092900 Sobic009G092900 Sobic008G090900--Sobic009G092900 Sobic002G181132 Sobic002G181132 Sobic008G090900--Sobic002G181132 Sobic001G382800 Sobic001G382800 Sobic008G090900--Sobic001G382800 Sobic008G067100 Sobic008G067100 Sobic008G090900--Sobic008G067100 Sobic003G045300 Sobic003G045300 Sobic008G090900--Sobic003G045300 Sobic001G375000 Sobic001G375000 Sobic008G090900--Sobic001G375000 Sobic003G128400 Sobic003G128400 Sobic008G090900--Sobic003G128400 Sobic008G090900--Sobic006G088000 Sobic002G189600--Sobic010G221600 Sobic007G026200 Sobic007G026200 Sobic002G189600--Sobic007G026200 Sobic002G189600--Sobic001G478600 Sobic004G162500 Sobic004G162500 Sobic002G189600--Sobic004G162500 Sobic009G160500 Sobic009G160500 Sobic002G189600--Sobic009G160500 Sobic002G189600--Sobic003G292300 Sobic002G189600--Sobic008G011300 Sobic001G441200 Sobic001G441200 Sobic002G189600--Sobic001G441200 Sobic007G211100 Sobic007G211100 Sobic002G189600--Sobic007G211100 Sobic004G003900--Sobic001G375000 Sobic004G003900--Sobic008G090900 Sobic004G003900--Sobic003G128400 Sobic004G003900--Sobic009G092900 Sobic004G003900--Sobic002G181132 Sobic004G003900--Sobic003G045300 Sobic003G162800 Sobic003G162800 Sobic004G003900--Sobic003G162800 Sobic004G003900--Sobic006G088000 Sobic004G003900--Sobic001G003900 Sobic001G025800--Sobic004G003900 Sobic005G117300 Sobic005G117300 Sobic001G025800--Sobic005G117300 Sobic001G495200 Sobic001G495200 Sobic001G025800--Sobic001G495200 Sobic002G048200 Sobic002G048200 Sobic001G025800--Sobic002G048200 Sobic009G251000 Sobic009G251000 Sobic001G025800--Sobic009G251000 Sobic001G513800 Sobic001G513800 Sobic001G025800--Sobic001G513800 Sobic003G267500 Sobic003G267500 Sobic001G025800--Sobic003G267500 Sobic007G015300 Sobic007G015300 Sobic001G025800--Sobic007G015300 Sobic001G025800--Sobic009G092900 Sobic005G184300 Sobic005G184300 Sobic001G003900--Sobic005G184300 Sobic001G003900--Sobic003G045300 Sobic001G099000 Sobic001G099000 Sobic001G003900--Sobic001G099000 Sobic001G003900--Sobic001G375000 Sobic001G003900--Sobic001G382800 Sobic001G003900--Sobic003G128400 Sobic001G003900--Sobic007G015300 Sobic001G003900--Sobic004G003900 Sobic010G027200 Sobic010G027200 Sobic001G003900--Sobic010G027200 Sobic001G032200 Sobic001G032200 Sobic008G011300--Sobic001G032200 Sobic007G211800 Sobic007G211800 Sobic008G011300--Sobic007G211800 Sobic010G204900 Sobic010G204900 Sobic008G011300--Sobic010G204900 Sobic008G011300--Sobic001G478600 Sobic001G063800 Sobic001G063800 Sobic008G011300--Sobic001G063800 Sobic001G495400 Sobic001G495400 Sobic008G011300--Sobic001G495400 Sobic008G011300--Sobic010G221600 Sobic008G011300--Sobic002G189600 Sobic002G388000 Sobic002G388000 Sobic008G011300--Sobic002G388000
Octagon: transcription factors


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