Gene annotation
Transcriptome id Sobic.008G157200.1
Synonym AtVHP2, VHP2, Sb08g020610, 2
Functional annotation inorganic H+ pyrophosphatase, putative, expressed
UniProt C5YRE5
Pfam PF03030
Panther DB PTHR31998 PTHR31998:SF11
NCBI CDD -
KEGG Orthology K01507; inorganic pyrophosphatase
Gene Ontology GO:0016020; membrane GO:0009678pyrophosphate hydrolysis-driven proton transmembrane transporter activity GO:0004427inorganic diphosphatase activity


Orthologs (automatic annotation)
TAIR AT1G16780 : Inorganic H pyrophosphatase family protein
RAP-DB (Rice) LOC_Os02g33490.1 : inorganic H+ pyrophosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a025293 , Zm00025a004602
Brachypodium KQK19093
Barley HORVU6Hr1G083160.8 , HORVU6Hr1G083160.6 , HORVU6Hr1G083160.7 , HORVU6Hr1G083160.4 , HORVU6Hr1G083160.5 , HORVU6Hr1G083160.2 , HORVU6Hr1G083160.3 , HORVU6Hr1G083160.1 , HORVU6Hr1G083160.9
Wheat TraesCS6D02G326300 , TraesCS6B02G376400 , TraesCSU02G080600
Populus PNT21899


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cDNA sequences
Sobic.008G157200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G073200 OTU-like cysteine protease family protein, putative, expressed K12655: OTUD5, OTU domain-containing protein 5
2 Sobic.006G127600 signal peptide peptidase-like 2B, putative, expressed K09597: signal peptide peptidase-like 2B
3 Sobic.004G131300 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
4 Sobic.009G084900 expressed protein -
5 Sobic.003G314700 expressed protein -
6 Sobic.007G162100 TENA/THI-4 family protein, putative, expressed -
7 Sobic.003G405500 mannosyl-oligosaccharide glucosidase, putative, expressed K01228: mannosyl-oligosaccharide glucosidase
8 Sobic.001G248100 histone acetyltransferase GCN5, putative, expressed K06062: PCAF, KAT2, histone acetyltransferase
9 Sobic.001G404600 expressed protein K18270: Rab3 GTPase-activating protein catalytic subunit
10 Sobic.008G135200 importin subunit beta, putative, expressed K14293: KPNB1, importin subunit beta-1
11 Sobic.009G256900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.010G013300 expressed protein -
13 Sobic.001G431000 Sel1 repeat domain containing protein, putative, expressed K14026: SEL1, SEL1 protein
14 Sobic.001G251100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
15 Sobic.004G257100 transmembrane 9 superfamily member, putative, expressed -
16 Sobic.008G124800 expressed protein -
17 Sobic.006G261400 peptidase, trypsin-like serine and cysteine proteases, putative, expressed -
18 Sobic.010G059500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
19 Sobic.001G089600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
20 Sobic.010G000800 PHD-finger domain containing protein, expressed -


Gene co-expression network
sample Sobic008G157200 Sobic008G157200 Sobic006G073200 Sobic006G073200 Sobic008G157200--Sobic006G073200 Sobic006G127600 Sobic006G127600 Sobic008G157200--Sobic006G127600 Sobic004G131300 Sobic004G131300 Sobic008G157200--Sobic004G131300 Sobic009G084900 Sobic009G084900 Sobic008G157200--Sobic009G084900 Sobic003G314700 Sobic003G314700 Sobic008G157200--Sobic003G314700 Sobic007G162100 Sobic007G162100 Sobic008G157200--Sobic007G162100 Sobic003G405500 Sobic003G405500 Sobic008G157200--Sobic003G405500 Sobic001G248100 Sobic001G248100 Sobic008G157200--Sobic001G248100 Sobic001G404600 Sobic001G404600 Sobic008G157200--Sobic001G404600 Sobic006G073200--Sobic008G157200 Sobic004G257100 Sobic004G257100 Sobic006G073200--Sobic004G257100 Sobic001G431000 Sobic001G431000 Sobic006G073200--Sobic001G431000 Sobic001G537500 Sobic001G537500 Sobic006G073200--Sobic001G537500 Sobic001G493200 Sobic001G493200 Sobic006G073200--Sobic001G493200 Sobic008G135200 Sobic008G135200 Sobic006G073200--Sobic008G135200 Sobic006G036100 Sobic006G036100 Sobic006G073200--Sobic006G036100 Sobic006G073200--Sobic004G131300 Sobic001G251100 Sobic001G251100 Sobic006G073200--Sobic001G251100 Sobic006G127600--Sobic007G162100 Sobic006G261400 Sobic006G261400 Sobic006G127600--Sobic006G261400 Sobic006G127600--Sobic008G157200 Sobic009G256900 Sobic009G256900 Sobic006G127600--Sobic009G256900 Sobic010G000800 Sobic010G000800 Sobic006G127600--Sobic010G000800 Sobic006G127600--Sobic001G251100 Sobic001G333100 Sobic001G333100 Sobic006G127600--Sobic001G333100 Sobic003G379200 Sobic003G379200 Sobic006G127600--Sobic003G379200 Sobic006G131000 Sobic006G131000 Sobic006G127600--Sobic006G131000 Sobic002G133300 Sobic002G133300 Sobic004G131300--Sobic002G133300 Sobic002G142900 Sobic002G142900 Sobic004G131300--Sobic002G142900 Sobic005G172500 Sobic005G172500 Sobic004G131300--Sobic005G172500 Sobic004G131300--Sobic009G084900 Sobic004G256500 Sobic004G256500 Sobic004G131300--Sobic004G256500 Sobic010G059500 Sobic010G059500 Sobic004G131300--Sobic010G059500 Sobic007G054800 Sobic007G054800 Sobic004G131300--Sobic007G054800 Sobic006G136400 Sobic006G136400 Sobic004G131300--Sobic006G136400 Sobic002G256700 Sobic002G256700 Sobic004G131300--Sobic002G256700 Sobic009G084900--Sobic010G059500 Sobic003G072200 Sobic003G072200 Sobic009G084900--Sobic003G072200 Sobic009G084900--Sobic001G493200 Sobic001G433800 Sobic001G433800 Sobic009G084900--Sobic001G433800 Sobic009G131300 Sobic009G131300 Sobic009G084900--Sobic009G131300 Sobic009G084900--Sobic002G133300 Sobic006G077200 Sobic006G077200 Sobic009G084900--Sobic006G077200 Sobic008G082500 Sobic008G082500 Sobic009G084900--Sobic008G082500 Sobic004G260100 Sobic004G260100 Sobic009G084900--Sobic004G260100 Sobic003G029600 Sobic003G029600 Sobic003G314700--Sobic003G029600 Sobic008G124800 Sobic008G124800 Sobic003G314700--Sobic008G124800 Sobic001G437400 Sobic001G437400 Sobic003G314700--Sobic001G437400 Sobic003G240700 Sobic003G240700 Sobic003G314700--Sobic003G240700 Sobic003G314700--Sobic003G405500 Sobic007G019300 Sobic007G019300 Sobic003G314700--Sobic007G019300 Sobic004G204100 Sobic004G204100 Sobic003G314700--Sobic004G204100 Sobic001G426600 Sobic001G426600 Sobic003G314700--Sobic001G426600 Sobic002G412700 Sobic002G412700 Sobic003G314700--Sobic002G412700 Sobic007G162100--Sobic006G127600 Sobic001G283600 Sobic001G283600 Sobic007G162100--Sobic001G283600 Sobic007G162100--Sobic009G084900 Sobic001G435400 Sobic001G435400 Sobic007G162100--Sobic001G435400 Sobic003G189600 Sobic003G189600 Sobic007G162100--Sobic003G189600 Sobic010G020400 Sobic010G020400 Sobic007G162100--Sobic010G020400 Sobic003G264100 Sobic003G264100 Sobic007G162100--Sobic003G264100 Sobic007G132100 Sobic007G132100 Sobic007G162100--Sobic007G132100 Sobic009G192300 Sobic009G192300 Sobic007G162100--Sobic009G192300 Sobic001G145400 Sobic001G145400 Sobic003G405500--Sobic001G145400 Sobic003G405500--Sobic008G124800 Sobic002G430300 Sobic002G430300 Sobic003G405500--Sobic002G430300 Sobic003G405500--Sobic009G084900 Sobic006G166200 Sobic006G166200 Sobic003G405500--Sobic006G166200 Sobic004G141800 Sobic004G141800 Sobic003G405500--Sobic004G141800 Sobic003G405500--Sobic006G077200 Sobic003G405500--Sobic010G059500 Sobic003G405500--Sobic003G314700 Sobic001G248100--Sobic002G412700 Sobic001G248100--Sobic010G000800 Sobic007G145400 Sobic007G145400 Sobic001G248100--Sobic007G145400 Sobic005G115500 Sobic005G115500 Sobic001G248100--Sobic005G115500 Sobic010G262100 Sobic010G262100 Sobic001G248100--Sobic010G262100 Sobic001G248100--Sobic006G261400 Sobic002G160700 Sobic002G160700 Sobic001G248100--Sobic002G160700 Sobic004G155600 Sobic004G155600 Sobic001G248100--Sobic004G155600 Sobic001G248100--Sobic003G405500 Sobic001G404600--Sobic008G124800 Sobic003G233400 Sobic003G233400 Sobic001G404600--Sobic003G233400 Sobic002G308500 Sobic002G308500 Sobic001G404600--Sobic002G308500 Sobic001G287500 Sobic001G287500 Sobic001G404600--Sobic001G287500 Sobic002G020700 Sobic002G020700 Sobic001G404600--Sobic002G020700 Sobic001G404600--Sobic009G084900 Sobic004G322400 Sobic004G322400 Sobic001G404600--Sobic004G322400 Sobic006G021700 Sobic006G021700 Sobic001G404600--Sobic006G021700 Sobic001G301200 Sobic001G301200 Sobic001G404600--Sobic001G301200
Octagon: transcription factors


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