Gene annotation
Transcriptome id Sobic.010G013300.1
Synonym
Functional annotation expressed protein
UniProt A0A194YGR1
Pfam PF04389
Panther DB PTHR12147 PTHR12147:SF6
NCBI CDD KOG2194; Aminopeptidases of the M20 family
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G20660 : Zn-dependent exopeptidases superfamily protein
RAP-DB (Rice) LOC_Os04g43916.2 : expressed protein
MaizeGDB (Corn) Zm00025a050244
Brachypodium KQJ83638 , KQJ83634 , KQJ83635 , KQJ83636 , KQJ83637 , KQJ83633
Barley HORVU7Hr1G116080.9 , HORVU7Hr1G116080.8 , HORVU7Hr1G116080.7 , HORVU7Hr1G116080.6 , HORVU7Hr1G116080.1 , HORVU7Hr1G116080.3 , HORVU7Hr1G116080.2 , HORVU2Hr1G089650.1 , HORVU2Hr1G089710.9 , HORVU2Hr1G089710.8 , HORVU2Hr1G089710.5 , HORVU2Hr1G089710.3 , HORVU2Hr1G089710.2 , HORVU2Hr1G089710.1 , HORVU2Hr1G089710.4 , HORVU7Hr1G116080.16 , HORVU2Hr1G089710.7 , HORVU2Hr1G089710.6 , HORVU7Hr1G116080.14 , HORVU7Hr1G116080.18 , HORVU7Hr1G116080.10 , HORVU7Hr1G116080.13
Wheat TraesCS2A02G589300 , TraesCS2D02G376400 , TraesCS2D02G376400 , TraesCS2B02G397200 , TraesCS2B02G397200 , TraesCS2B02G397200 , TraesCS2A02G380200 , TraesCS2A02G380200 , TraesCS2A02G380200 , TraesCS2B02G594400
Populus -


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cDNA sequences
Sobic.010G013300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G157200 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
2 Sobic.006G127600 signal peptide peptidase-like 2B, putative, expressed K09597: signal peptide peptidase-like 2B
3 Sobic.006G280000 transportin-2, putative, expressed K18752: TNPO1, IPO2, transportin-1
4 Sobic.001G333100 U-box domain-containing protein, putative, expressed K10597: UBE4B, ubiquitin conjugation factor E4 B
5 Sobic.005G140500 peptidase, M24 family protein, putative, expressed K01262: Xaa-Pro aminopeptidase
6 Sobic.001G192000 autophagy protein 9, putative, expressed K17907: autophagy-related protein 9
7 Sobic.003G296900 expressed protein -
8 Sobic.009G131300 cation-transporting ATPase, putative, expressed K14950: ATP13A1, manganese-transporting P-type ATPase
9 Sobic.003G264100 - K10843: ERCC3, DNA excision repair protein ERCC-3
10 Sobic.002G429300 importin subunit beta, putative, expressed -
11 Sobic.006G039400 cation efflux family protein, putative, expressed K14696: SLC30A9, solute carrier family 30 (zinc transporter), member 9
12 Sobic.002G335600 eukaryotic translation initiation factor 4G, putative, expressed K03260: translation initiation factor 4G
13 Sobic.002G275700 pantothenate kinase, putative, expressed K09680: type II pantothenate kinase
14 Sobic.004G131300 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
15 Sobic.008G033500 nucleolar GTPase, putative, expressed -
16 Sobic.003G110000 TBC domain containing protein, expressed -
17 Sobic.007G162100 TENA/THI-4 family protein, putative, expressed -
18 Sobic.005G003500 - -
19 Sobic.006G021700 expressed protein K17600: vacuolar protein sorting-associated protein 54
20 Sobic.001G435400 vacuolar ATP synthase 98 kDa subunit, putative, expressed K02154: ATPeV0A, V-type H+-transporting ATPase subunit a


Gene co-expression network
sample Sobic010G013300 Sobic010G013300 Sobic008G157200 Sobic008G157200 Sobic010G013300--Sobic008G157200 Sobic006G127600 Sobic006G127600 Sobic010G013300--Sobic006G127600 Sobic006G280000 Sobic006G280000 Sobic010G013300--Sobic006G280000 Sobic001G333100 Sobic001G333100 Sobic010G013300--Sobic001G333100 Sobic005G140500 Sobic005G140500 Sobic010G013300--Sobic005G140500 Sobic001G192000 Sobic001G192000 Sobic010G013300--Sobic001G192000 Sobic003G296900 Sobic003G296900 Sobic010G013300--Sobic003G296900 Sobic009G131300 Sobic009G131300 Sobic010G013300--Sobic009G131300 Sobic003G264100 Sobic003G264100 Sobic010G013300--Sobic003G264100 Sobic006G073200 Sobic006G073200 Sobic008G157200--Sobic006G073200 Sobic008G157200--Sobic006G127600 Sobic004G131300 Sobic004G131300 Sobic008G157200--Sobic004G131300 Sobic009G084900 Sobic009G084900 Sobic008G157200--Sobic009G084900 Sobic003G314700 Sobic003G314700 Sobic008G157200--Sobic003G314700 Sobic007G162100 Sobic007G162100 Sobic008G157200--Sobic007G162100 Sobic003G405500 Sobic003G405500 Sobic008G157200--Sobic003G405500 Sobic001G248100 Sobic001G248100 Sobic008G157200--Sobic001G248100 Sobic001G404600 Sobic001G404600 Sobic008G157200--Sobic001G404600 Sobic006G127600--Sobic007G162100 Sobic006G261400 Sobic006G261400 Sobic006G127600--Sobic006G261400 Sobic006G127600--Sobic008G157200 Sobic009G256900 Sobic009G256900 Sobic006G127600--Sobic009G256900 Sobic010G000800 Sobic010G000800 Sobic006G127600--Sobic010G000800 Sobic001G251100 Sobic001G251100 Sobic006G127600--Sobic001G251100 Sobic006G127600--Sobic001G333100 Sobic003G379200 Sobic003G379200 Sobic006G127600--Sobic003G379200 Sobic006G131000 Sobic006G131000 Sobic006G127600--Sobic006G131000 Sobic007G054800 Sobic007G054800 Sobic006G280000--Sobic007G054800 Sobic001G542500 Sobic001G542500 Sobic006G280000--Sobic001G542500 Sobic004G004300 Sobic004G004300 Sobic006G280000--Sobic004G004300 Sobic002G256700 Sobic002G256700 Sobic006G280000--Sobic002G256700 Sobic003G337300 Sobic003G337300 Sobic006G280000--Sobic003G337300 Sobic001G089600 Sobic001G089600 Sobic006G280000--Sobic001G089600 Sobic003G104000 Sobic003G104000 Sobic006G280000--Sobic003G104000 Sobic001G287500 Sobic001G287500 Sobic006G280000--Sobic001G287500 Sobic001G117200 Sobic001G117200 Sobic006G280000--Sobic001G117200 Sobic001G333100--Sobic003G264100 Sobic002G020700 Sobic002G020700 Sobic001G333100--Sobic002G020700 Sobic003G221400 Sobic003G221400 Sobic001G333100--Sobic003G221400 Sobic001G333100--Sobic001G192000 Sobic010G020400 Sobic010G020400 Sobic001G333100--Sobic010G020400 Sobic002G142900 Sobic002G142900 Sobic001G333100--Sobic002G142900 Sobic010G223300 Sobic010G223300 Sobic001G333100--Sobic010G223300 Sobic001G333100--Sobic001G251100 Sobic008G033500 Sobic008G033500 Sobic001G333100--Sobic008G033500 Sobic004G262700 Sobic004G262700 Sobic005G140500--Sobic004G262700 Sobic010G100800 Sobic010G100800 Sobic005G140500--Sobic010G100800 Sobic002G428800 Sobic002G428800 Sobic005G140500--Sobic002G428800 Sobic005G140500--Sobic010G013300 Sobic006G238700 Sobic006G238700 Sobic005G140500--Sobic006G238700 Sobic003G194100 Sobic003G194100 Sobic005G140500--Sobic003G194100 Sobic005G140500--Sobic006G280000 Sobic001G396000 Sobic001G396000 Sobic005G140500--Sobic001G396000 Sobic007G029500 Sobic007G029500 Sobic005G140500--Sobic007G029500 Sobic002G275700 Sobic002G275700 Sobic001G192000--Sobic002G275700 Sobic009G255700 Sobic009G255700 Sobic001G192000--Sobic009G255700 Sobic005G162500 Sobic005G162500 Sobic001G192000--Sobic005G162500 Sobic008G088872 Sobic008G088872 Sobic001G192000--Sobic008G088872 Sobic001G192000--Sobic001G333100 Sobic003G195000 Sobic003G195000 Sobic001G192000--Sobic003G195000 Sobic002G146300 Sobic002G146300 Sobic001G192000--Sobic002G146300 Sobic001G370900 Sobic001G370900 Sobic001G192000--Sobic001G370900 Sobic001G192000--Sobic003G221400 Sobic003G043000 Sobic003G043000 Sobic003G296900--Sobic003G043000 Sobic001G065100 Sobic001G065100 Sobic003G296900--Sobic001G065100 Sobic004G053500 Sobic004G053500 Sobic003G296900--Sobic004G053500 Sobic003G308500 Sobic003G308500 Sobic003G296900--Sobic003G308500 Sobic004G265500 Sobic004G265500 Sobic003G296900--Sobic004G265500 Sobic003G241700 Sobic003G241700 Sobic003G296900--Sobic003G241700 Sobic001G255800 Sobic001G255800 Sobic003G296900--Sobic001G255800 Sobic003G296900--Sobic010G000800 Sobic003G296900--Sobic004G131300 Sobic002G429300 Sobic002G429300 Sobic009G131300--Sobic002G429300 Sobic002G401500 Sobic002G401500 Sobic009G131300--Sobic002G401500 Sobic009G131300--Sobic005G162500 Sobic009G131300--Sobic008G088872 Sobic010G059500 Sobic010G059500 Sobic009G131300--Sobic010G059500 Sobic008G098900 Sobic008G098900 Sobic009G131300--Sobic008G098900 Sobic006G184900 Sobic006G184900 Sobic009G131300--Sobic006G184900 Sobic001G493700 Sobic001G493700 Sobic009G131300--Sobic001G493700 Sobic009G131300--Sobic009G084900 Sobic003G264100--Sobic001G333100 Sobic009G109925 Sobic009G109925 Sobic003G264100--Sobic009G109925 Sobic006G196300 Sobic006G196300 Sobic003G264100--Sobic006G196300 Sobic002G311100 Sobic002G311100 Sobic003G264100--Sobic002G311100 Sobic006G180000 Sobic006G180000 Sobic003G264100--Sobic006G180000 Sobic009G068500 Sobic009G068500 Sobic003G264100--Sobic009G068500 Sobic001G227400 Sobic001G227400 Sobic003G264100--Sobic001G227400 Sobic003G264100--Sobic001G192000 Sobic003G264100--Sobic003G195000
Octagon: transcription factors


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