Gene annotation
Transcriptome id Sobic.001G434700.1
Synonym Sb01g040900
Functional annotation phosphomevalonate kinase, putative, expressed
UniProt C5WQW2
Pfam PF08544 PF00288
Panther DB PTHR31814
NCBI CDD KOG4519; Phosphomevalonate kinase
KEGG Orthology K00938; E2.7.4.2, phosphomevalonate kinase
Gene Ontology GO:0005524; ATP binding


Orthologs (automatic annotation)
TAIR AT1G31910 : GHMP kinase family protein
RAP-DB (Rice) LOC_Os03g48160.1 : phosphomevalonate kinase, putative, expressed
MaizeGDB (Corn) Zm00025a001611
Brachypodium KQK22533 , KQK22532
Barley HORVU4Hr1G062630.1 , HORVU4Hr1G062630.3 , HORVU4Hr1G062630.2 , HORVU4Hr1G062630.5 , HORVU4Hr1G062630.4 , HORVU4Hr1G062630.6
Wheat TraesCS4B02G221900 , TraesCS4A02G082100 , TraesCS4D02G222300
Populus PNT44698 , PNT44697 , PNT44696


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cDNA sequences
Sobic.001G434700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G031000 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed K00225: L-galactono-1,4-lactone dehydrogenase
2 Sobic.006G237000 3-oxoacyl-synthase III, chloroplast precursor, putative, expressed K00648: 3-oxoacyl-[acyl-carrier-protein] synthase III
3 Sobic.004G247100 peptidase, putative, expressed -
4 Sobic.010G155600 DJ-1 family protein, putative, expressed K03152: protein deglycase
5 Sobic.008G059900 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
6 Sobic.009G020100 hydrolase, NUDIX family, domain containing protein, expressed -
7 Sobic.003G230600 transcription factor X1, putative, expressed -
8 Sobic.004G356200 expressed protein -
9 Sobic.008G097600 cyclin-T1-4, putative, expressed K15188: cyclin T
10 Sobic.007G047600 expressed protein -
11 Sobic.001G125500 ethylene-insensitive protein, putative, expressed K14513: ethylene-insensitive protein 2
12 Sobic.003G135500 sugar transporter superfamily, putative, expressed -
13 Sobic.001G200200 tetratricopeptide repeat, putative, expressed -
14 Sobic.004G290200 glutathione peroxidase, putative, expressed -
15 Sobic.001G537500 GTP-binding protein, putative, expressed K06944: uncharacterized protein
16 Sobic.010G197200 peroxiredoxin, putative, expressed -
17 Sobic.010G003900 arginine N-methyltransferase 7, putative, expressed K11438: type III protein arginine methyltransferase
18 Sobic.007G145400 expressed protein -
19 Sobic.002G125800 phosphoglucomutase, putative, expressed -
20 Sobic.001G533100 GHMP kinases ATP-binding protein, putative, expressed K05305: fucokinase


Gene co-expression network
sample Sobic001G434700 Sobic001G434700 Sobic005G031000 Sobic005G031000 Sobic001G434700--Sobic005G031000 Sobic006G237000 Sobic006G237000 Sobic001G434700--Sobic006G237000 Sobic004G247100 Sobic004G247100 Sobic001G434700--Sobic004G247100 Sobic010G155600 Sobic010G155600 Sobic001G434700--Sobic010G155600 Sobic008G059900 Sobic008G059900 Sobic001G434700--Sobic008G059900 Sobic009G020100 Sobic009G020100 Sobic001G434700--Sobic009G020100 Sobic003G230600 Sobic003G230600 Sobic001G434700--Sobic003G230600 Sobic004G356200 Sobic004G356200 Sobic001G434700--Sobic004G356200 Sobic008G097600 Sobic008G097600 Sobic001G434700--Sobic008G097600 Sobic005G031000--Sobic004G356200 Sobic001G200200 Sobic001G200200 Sobic005G031000--Sobic001G200200 Sobic005G031000--Sobic008G059900 Sobic002G125800 Sobic002G125800 Sobic005G031000--Sobic002G125800 Sobic005G031000--Sobic001G434700 Sobic005G031000--Sobic006G237000 Sobic001G533100 Sobic001G533100 Sobic005G031000--Sobic001G533100 Sobic004G037200 Sobic004G037200 Sobic005G031000--Sobic004G037200 Sobic005G031000--Sobic010G155600 Sobic006G237000--Sobic002G125800 Sobic006G237000--Sobic005G031000 Sobic006G237000--Sobic001G200200 Sobic006G237000--Sobic010G155600 Sobic010G003900 Sobic010G003900 Sobic006G237000--Sobic010G003900 Sobic002G155100 Sobic002G155100 Sobic006G237000--Sobic002G155100 Sobic006G237000--Sobic008G059900 Sobic005G098800 Sobic005G098800 Sobic006G237000--Sobic005G098800 Sobic001G537500 Sobic001G537500 Sobic006G237000--Sobic001G537500 Sobic006G212900 Sobic006G212900 Sobic004G247100--Sobic006G212900 Sobic001G467100 Sobic001G467100 Sobic004G247100--Sobic001G467100 Sobic009G195700 Sobic009G195700 Sobic004G247100--Sobic009G195700 Sobic007G047600 Sobic007G047600 Sobic004G247100--Sobic007G047600 Sobic002G116500 Sobic002G116500 Sobic004G247100--Sobic002G116500 Sobic007G145400 Sobic007G145400 Sobic004G247100--Sobic007G145400 Sobic007G051400 Sobic007G051400 Sobic004G247100--Sobic007G051400 Sobic007G102500 Sobic007G102500 Sobic004G247100--Sobic007G102500 Sobic001G461300 Sobic001G461300 Sobic004G247100--Sobic001G461300 Sobic010G155600--Sobic006G237000 Sobic010G155600--Sobic005G031000 Sobic010G155600--Sobic008G097600 Sobic010G155600--Sobic002G125800 Sobic010G155600--Sobic001G434700 Sobic004G275600 Sobic004G275600 Sobic010G155600--Sobic004G275600 Sobic010G155600--Sobic001G537500 Sobic010G155600--Sobic004G356200 Sobic010G155600--Sobic004G037200 Sobic010G197200 Sobic010G197200 Sobic008G059900--Sobic010G197200 Sobic008G059900--Sobic005G031000 Sobic001G199500 Sobic001G199500 Sobic008G059900--Sobic001G199500 Sobic004G253500 Sobic004G253500 Sobic008G059900--Sobic004G253500 Sobic010G073500 Sobic010G073500 Sobic008G059900--Sobic010G073500 Sobic003G102700 Sobic003G102700 Sobic008G059900--Sobic003G102700 Sobic006G071628 Sobic006G071628 Sobic008G059900--Sobic006G071628 Sobic008G059900--Sobic006G237000 Sobic003G392100 Sobic003G392100 Sobic008G059900--Sobic003G392100 Sobic009G020100--Sobic001G434700 Sobic009G020100--Sobic008G059900 Sobic003G360300 Sobic003G360300 Sobic009G020100--Sobic003G360300 Sobic009G020100--Sobic008G097600 Sobic009G020100--Sobic007G047600 Sobic009G020100--Sobic009G195700 Sobic009G020100--Sobic004G356200 Sobic002G264300 Sobic002G264300 Sobic009G020100--Sobic002G264300 Sobic009G020100--Sobic004G247100 Sobic005G114500 Sobic005G114500 Sobic003G230600--Sobic005G114500 Sobic001G125500 Sobic001G125500 Sobic003G230600--Sobic001G125500 Sobic009G128500 Sobic009G128500 Sobic003G230600--Sobic009G128500 Sobic001G308400 Sobic001G308400 Sobic003G230600--Sobic001G308400 Sobic003G230600--Sobic007G145400 Sobic008G092800 Sobic008G092800 Sobic003G230600--Sobic008G092800 Sobic003G143800 Sobic003G143800 Sobic003G230600--Sobic003G143800 Sobic002G363800 Sobic002G363800 Sobic003G230600--Sobic002G363800 Sobic001G097500 Sobic001G097500 Sobic003G230600--Sobic001G097500 Sobic004G356200--Sobic001G200200 Sobic002G371600 Sobic002G371600 Sobic004G356200--Sobic002G371600 Sobic004G356200--Sobic005G031000 Sobic001G248100 Sobic001G248100 Sobic004G356200--Sobic001G248100 Sobic002G137601 Sobic002G137601 Sobic004G356200--Sobic002G137601 Sobic002G160700 Sobic002G160700 Sobic004G356200--Sobic002G160700 Sobic004G356200--Sobic007G047600 Sobic004G030400 Sobic004G030400 Sobic004G356200--Sobic004G030400 Sobic001G085800 Sobic001G085800 Sobic004G356200--Sobic001G085800 Sobic002G292800 Sobic002G292800 Sobic008G097600--Sobic002G292800 Sobic008G097600--Sobic010G155600 Sobic003G413100 Sobic003G413100 Sobic008G097600--Sobic003G413100 Sobic001G032200 Sobic001G032200 Sobic008G097600--Sobic001G032200 Sobic008G097600--Sobic009G020100 Sobic006G245900 Sobic006G245900 Sobic008G097600--Sobic006G245900 Sobic007G211800 Sobic007G211800 Sobic008G097600--Sobic007G211800 Sobic001G258900 Sobic001G258900 Sobic008G097600--Sobic001G258900 Sobic009G107300 Sobic009G107300 Sobic008G097600--Sobic009G107300
Octagon: transcription factors


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