Gene annotation
Transcriptome id Sobic.004G290200.1
Synonym PHGPX, LSC803, ATGPX6, GPX6
Functional annotation glutathione peroxidase, putative, expressed
UniProt A0A194YTA2
Pfam PF00255
Panther DB PTHR11592 PTHR11592:SF42
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006979; response to oxidative stress GO:0004602glutathione peroxidase activity


Orthologs (automatic annotation)
TAIR AT4G11600 : glutathione peroxidase 6
RAP-DB (Rice) LOC_Os02g44500.1 : glutathione peroxidase, putative, expressed
MaizeGDB (Corn) Zm00025a032236
Brachypodium KQK00667
Barley HORVU6Hr1G063830.5 , HORVU6Hr1G063830.10 , HORVU6Hr1G063830.6 , HORVU6Hr1G063830.8 , HORVU6Hr1G063830.9 , HORVU6Hr1G063830.2 , HORVU6Hr1G063830.1
Wheat TraesCS2D02G407700 , TraesCS6D02G228800 , TraesCS2B02G429100 , TraesCS6B02G278100
Populus -


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cDNA sequences
Sobic.004G290200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G290100 glutathione peroxidase, putative, expressed -
2 Sobic.001G125500 ethylene-insensitive protein, putative, expressed K14513: ethylene-insensitive protein 2
3 Sobic.001G434700 phosphomevalonate kinase, putative, expressed K00938: E2.7.4.2, phosphomevalonate kinase
4 Sobic.001G342900 ubiquinone biosynthesis protein COQ9, mitochondrial precursor, putative, expressed K18587: ubiquinone biosynthesis protein COQ9
5 Sobic.008G037700 pentatricopeptide containing protein, putative, expressed -
6 Sobic.003G166500 NAD dependent epimerase/dehydratase family protein, putative, expressed -
7 Sobic.008G097600 cyclin-T1-4, putative, expressed K15188: cyclin T
8 Sobic.004G037200 cycloartenol synthase, putative, expressed K01853: cycloartenol synthase
9 Sobic.010G155600 DJ-1 family protein, putative, expressed K03152: protein deglycase
10 Sobic.003G256800 RNA polymerase III subunit RPC82 family protein, putative, expressed K03023: RPC3, DNA-directed RNA polymerase III subunit RPC3
11 Sobic.002G363800 expressed protein -
12 Sobic.003G433300 DNA mismatch repair protein Mlh1, putative, expressed K08734: DNA mismatch repair protein MLH1
13 Sobic.003G202100 Uncharacterized ACR, COG1565 containing protein, putative, expressed K18164: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7
14 Sobic.003G012000 GTPase of unknown function domain containing protein, putative, expressed -
15 Sobic.003G193500 CK1_CaseinKinase_1.2 - CK1 includes the casein kinase 1 kinases, expressed K02218: CSNK1, casein kinase 1
16 Sobic.002G198100 pentatricopeptide, putative, expressed -
17 Sobic.001G019800 FAD binding domain containing protein, expressed K06126: ubiquinone biosynthesis monooxygenase Coq6
18 Sobic.004G247100 peptidase, putative, expressed -
19 Sobic.010G066400 PPR repeat domain containing protein, putative, expressed -
20 Sobic.002G296400 E3 ubiquitin-protein ligase HERC2, putative, expressed -


Gene co-expression network
sample Sobic004G290200 Sobic004G290200 Sobic004G290100 Sobic004G290100 Sobic004G290200--Sobic004G290100 Sobic001G125500 Sobic001G125500 Sobic004G290200--Sobic001G125500 Sobic001G434700 Sobic001G434700 Sobic004G290200--Sobic001G434700 Sobic001G342900 Sobic001G342900 Sobic004G290200--Sobic001G342900 Sobic008G037700 Sobic008G037700 Sobic004G290200--Sobic008G037700 Sobic003G166500 Sobic003G166500 Sobic004G290200--Sobic003G166500 Sobic008G097600 Sobic008G097600 Sobic004G290200--Sobic008G097600 Sobic004G037200 Sobic004G037200 Sobic004G290200--Sobic004G037200 Sobic010G155600 Sobic010G155600 Sobic004G290200--Sobic010G155600 Sobic004G290100--Sobic001G342900 Sobic002G054400 Sobic002G054400 Sobic004G290100--Sobic002G054400 Sobic004G290100--Sobic004G290200 Sobic004G290100--Sobic001G125500 Sobic005G045700 Sobic005G045700 Sobic004G290100--Sobic005G045700 Sobic007G122700 Sobic007G122700 Sobic004G290100--Sobic007G122700 Sobic003G427200 Sobic003G427200 Sobic004G290100--Sobic003G427200 Sobic008G046000 Sobic008G046000 Sobic004G290100--Sobic008G046000 Sobic002G383700 Sobic002G383700 Sobic004G290100--Sobic002G383700 Sobic003G230600 Sobic003G230600 Sobic001G125500--Sobic003G230600 Sobic002G363800 Sobic002G363800 Sobic001G125500--Sobic002G363800 Sobic009G128500 Sobic009G128500 Sobic001G125500--Sobic009G128500 Sobic003G256800 Sobic003G256800 Sobic001G125500--Sobic003G256800 Sobic001G308400 Sobic001G308400 Sobic001G125500--Sobic001G308400 Sobic006G245900 Sobic006G245900 Sobic001G125500--Sobic006G245900 Sobic002G381900 Sobic002G381900 Sobic001G125500--Sobic002G381900 Sobic002G241600 Sobic002G241600 Sobic001G125500--Sobic002G241600 Sobic002G296400 Sobic002G296400 Sobic001G125500--Sobic002G296400 Sobic005G031000 Sobic005G031000 Sobic001G434700--Sobic005G031000 Sobic006G237000 Sobic006G237000 Sobic001G434700--Sobic006G237000 Sobic004G247100 Sobic004G247100 Sobic001G434700--Sobic004G247100 Sobic001G434700--Sobic010G155600 Sobic008G059900 Sobic008G059900 Sobic001G434700--Sobic008G059900 Sobic009G020100 Sobic009G020100 Sobic001G434700--Sobic009G020100 Sobic001G434700--Sobic003G230600 Sobic004G356200 Sobic004G356200 Sobic001G434700--Sobic004G356200 Sobic001G434700--Sobic008G097600 Sobic006G250800 Sobic006G250800 Sobic001G342900--Sobic006G250800 Sobic009G116900 Sobic009G116900 Sobic001G342900--Sobic009G116900 Sobic001G404900 Sobic001G404900 Sobic001G342900--Sobic001G404900 Sobic001G342900--Sobic004G290100 Sobic002G306100 Sobic002G306100 Sobic001G342900--Sobic002G306100 Sobic003G193500 Sobic003G193500 Sobic001G342900--Sobic003G193500 Sobic001G342900--Sobic009G128500 Sobic007G087000 Sobic007G087000 Sobic001G342900--Sobic007G087000 Sobic003G235100 Sobic003G235100 Sobic001G342900--Sobic003G235100 Sobic002G252400 Sobic002G252400 Sobic008G037700--Sobic002G252400 Sobic002G084800 Sobic002G084800 Sobic008G037700--Sobic002G084800 Sobic008G037700--Sobic009G116900 Sobic006G106300 Sobic006G106300 Sobic008G037700--Sobic006G106300 Sobic008G176000 Sobic008G176000 Sobic008G037700--Sobic008G176000 Sobic010G091400 Sobic010G091400 Sobic008G037700--Sobic010G091400 Sobic010G169900 Sobic010G169900 Sobic008G037700--Sobic010G169900 Sobic003G409900 Sobic003G409900 Sobic008G037700--Sobic003G409900 Sobic003G021600 Sobic003G021600 Sobic008G037700--Sobic003G021600 Sobic003G166500--Sobic004G037200 Sobic008G072500 Sobic008G072500 Sobic003G166500--Sobic008G072500 Sobic003G202100 Sobic003G202100 Sobic003G166500--Sobic003G202100 Sobic006G017800 Sobic006G017800 Sobic003G166500--Sobic006G017800 Sobic003G048600 Sobic003G048600 Sobic003G166500--Sobic003G048600 Sobic005G018800 Sobic005G018800 Sobic003G166500--Sobic005G018800 Sobic001G115700 Sobic001G115700 Sobic003G166500--Sobic001G115700 Sobic003G166500--Sobic006G106300 Sobic010G133400 Sobic010G133400 Sobic003G166500--Sobic010G133400 Sobic002G292800 Sobic002G292800 Sobic008G097600--Sobic002G292800 Sobic008G097600--Sobic010G155600 Sobic003G413100 Sobic003G413100 Sobic008G097600--Sobic003G413100 Sobic001G032200 Sobic001G032200 Sobic008G097600--Sobic001G032200 Sobic008G097600--Sobic009G020100 Sobic008G097600--Sobic006G245900 Sobic007G211800 Sobic007G211800 Sobic008G097600--Sobic007G211800 Sobic001G258900 Sobic001G258900 Sobic008G097600--Sobic001G258900 Sobic009G107300 Sobic009G107300 Sobic008G097600--Sobic009G107300 Sobic004G037200--Sobic003G166500 Sobic004G037200--Sobic005G031000 Sobic001G533100 Sobic001G533100 Sobic004G037200--Sobic001G533100 Sobic002G125800 Sobic002G125800 Sobic004G037200--Sobic002G125800 Sobic004G037200--Sobic010G155600 Sobic004G037200--Sobic008G072500 Sobic001G203600 Sobic001G203600 Sobic004G037200--Sobic001G203600 Sobic004G037200--Sobic003G202100 Sobic004G037200--Sobic003G048600 Sobic010G155600--Sobic006G237000 Sobic010G155600--Sobic005G031000 Sobic010G155600--Sobic008G097600 Sobic010G155600--Sobic002G125800 Sobic010G155600--Sobic001G434700 Sobic004G275600 Sobic004G275600 Sobic010G155600--Sobic004G275600 Sobic001G537500 Sobic001G537500 Sobic010G155600--Sobic001G537500 Sobic010G155600--Sobic004G356200 Sobic010G155600--Sobic004G037200
Octagon: transcription factors


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