Gene annotation
Transcriptome id Sobic.001G125500.1
Synonym CKR1, EIN2, ORE2, ORE3, PIR2, Sb01g011025, ATEIN2, ERA3
Functional annotation ethylene-insensitive protein, putative, expressed
UniProt A0A1B6QIN8
Pfam PF01566
Panther DB PTHR11706 PTHR11706:SF44
NCBI CDD KOG1291; Mn2+ and Fe2+ transporters of the NRAMP family
KEGG Orthology K14513; ethylene-insensitive protein 2
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT5G03280 : NRAMP metal ion transporter family protein
RAP-DB (Rice) LOC_Os07g06130.2 : ethylene-insensitive protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT74272 , PNT74273 , PNT74270 , PNT74271 , KQJ86905
Barley HORVU5Hr1G050330.2 , HORVU5Hr1G050330.1 , HORVU5Hr1G050330.3 , HORVU5Hr1G050330.4 , HORVU5Hr1G050330.5
Wheat TraesCS4A02G275600 , TraesCS5A02G547500 , TraesCS5A02G547500 , TraesCSU02G131600 , TraesCS4B02G038100 , TraesCS2B02G133000 , TraesCS4D02G036000 , TraesCS4D02G036000 , TraesCS4D02G036000 , TraesCS4D02G036000 , TraesCS5A02G161200 , TraesCS5A02G161200 , TraesCS5A02G161200 , TraesCS5A02G161200 , TraesCS5A02G161200 , TraesCS5D02G166000 , TraesCS5D02G166000 , TraesCS5D02G166000 , TraesCS5B02G158500
Populus -


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cDNA sequences
Sobic.001G125500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G230600 transcription factor X1, putative, expressed -
2 Sobic.002G363800 expressed protein -
3 Sobic.009G128500 CBS domain containing protein, expressed K16302: metal transporter CNNM
4 Sobic.003G256800 RNA polymerase III subunit RPC82 family protein, putative, expressed K03023: RPC3, DNA-directed RNA polymerase III subunit RPC3
5 Sobic.001G308400 expressed protein -
6 Sobic.006G245900 FAR1 family protein, expressed -
7 Sobic.002G381900 expressed protein -
8 Sobic.002G241600 - -
9 Sobic.002G296400 E3 ubiquitin-protein ligase HERC2, putative, expressed -
10 Sobic.003G378100 expressed protein K04730: interleukin-1 receptor-associated kinase 1
11 Sobic.003G043000 expressed protein -
12 Sobic.003G193500 CK1_CaseinKinase_1.2 - CK1 includes the casein kinase 1 kinases, expressed K02218: CSNK1, casein kinase 1
13 Sobic.004G031300 PPR repeat domain containing protein, putative, expressed -
14 Sobic.009G107300 3\'-5\' exonuclease, putative, expressed -
15 Sobic.003G420400 - -
16 Sobic.003G012000 GTPase of unknown function domain containing protein, putative, expressed -
17 Sobic.004G290100 glutathione peroxidase, putative, expressed -
18 Sobic.005G026400 pentatricopeptide repeat domain containing protein, putative, expressed -
19 Sobic.003G021600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K13117: ATP-dependent RNA helicase DDX35
20 Sobic.002G292800 MORN repeat domain containing protein, expressed -


Gene co-expression network
sample Sobic001G125500 Sobic001G125500 Sobic003G230600 Sobic003G230600 Sobic001G125500--Sobic003G230600 Sobic002G363800 Sobic002G363800 Sobic001G125500--Sobic002G363800 Sobic009G128500 Sobic009G128500 Sobic001G125500--Sobic009G128500 Sobic003G256800 Sobic003G256800 Sobic001G125500--Sobic003G256800 Sobic001G308400 Sobic001G308400 Sobic001G125500--Sobic001G308400 Sobic006G245900 Sobic006G245900 Sobic001G125500--Sobic006G245900 Sobic002G381900 Sobic002G381900 Sobic001G125500--Sobic002G381900 Sobic002G241600 Sobic002G241600 Sobic001G125500--Sobic002G241600 Sobic002G296400 Sobic002G296400 Sobic001G125500--Sobic002G296400 Sobic005G114500 Sobic005G114500 Sobic003G230600--Sobic005G114500 Sobic003G230600--Sobic001G125500 Sobic003G230600--Sobic009G128500 Sobic003G230600--Sobic001G308400 Sobic007G145400 Sobic007G145400 Sobic003G230600--Sobic007G145400 Sobic008G092800 Sobic008G092800 Sobic003G230600--Sobic008G092800 Sobic003G143800 Sobic003G143800 Sobic003G230600--Sobic003G143800 Sobic003G230600--Sobic002G363800 Sobic001G097500 Sobic001G097500 Sobic003G230600--Sobic001G097500 Sobic002G363800--Sobic002G296400 Sobic002G371600 Sobic002G371600 Sobic002G363800--Sobic002G371600 Sobic002G363800--Sobic001G125500 Sobic001G097900 Sobic001G097900 Sobic002G363800--Sobic001G097900 Sobic002G363800--Sobic003G256800 Sobic002G363800--Sobic008G092800 Sobic002G363800--Sobic007G145400 Sobic001G340000 Sobic001G340000 Sobic002G363800--Sobic001G340000 Sobic002G363800--Sobic003G230600 Sobic010G169900 Sobic010G169900 Sobic009G128500--Sobic010G169900 Sobic009G128500--Sobic001G308400 Sobic003G193500 Sobic003G193500 Sobic009G128500--Sobic003G193500 Sobic009G122500 Sobic009G122500 Sobic009G128500--Sobic009G122500 Sobic002G355800 Sobic002G355800 Sobic009G128500--Sobic002G355800 Sobic009G116900 Sobic009G116900 Sobic009G128500--Sobic009G116900 Sobic010G223400 Sobic010G223400 Sobic009G128500--Sobic010G223400 Sobic003G021600 Sobic003G021600 Sobic009G128500--Sobic003G021600 Sobic001G490900 Sobic001G490900 Sobic009G128500--Sobic001G490900 Sobic009G254100 Sobic009G254100 Sobic003G256800--Sobic009G254100 Sobic002G227500 Sobic002G227500 Sobic003G256800--Sobic002G227500 Sobic003G256800--Sobic003G021600 Sobic003G012000 Sobic003G012000 Sobic003G256800--Sobic003G012000 Sobic006G029100 Sobic006G029100 Sobic003G256800--Sobic006G029100 Sobic003G256800--Sobic002G296400 Sobic003G256800--Sobic002G363800 Sobic003G256800--Sobic001G097900 Sobic002G398700 Sobic002G398700 Sobic003G256800--Sobic002G398700 Sobic004G265500 Sobic004G265500 Sobic001G308400--Sobic004G265500 Sobic001G308400--Sobic002G227500 SobicK028600 SobicK028600 Sobic001G308400--SobicK028600 Sobic003G043000 Sobic003G043000 Sobic001G308400--Sobic003G043000 Sobic001G308400--Sobic010G169900 Sobic006G128100 Sobic006G128100 Sobic001G308400--Sobic006G128100 Sobic004G357100 Sobic004G357100 Sobic001G308400--Sobic004G357100 Sobic001G156900 Sobic001G156900 Sobic001G308400--Sobic001G156900 Sobic003G394200 Sobic003G394200 Sobic001G308400--Sobic003G394200 Sobic006G245900--Sobic002G371600 Sobic006G245900--Sobic002G296400 Sobic004G031300 Sobic004G031300 Sobic006G245900--Sobic004G031300 Sobic007G016900 Sobic007G016900 Sobic006G245900--Sobic007G016900 Sobic002G292800 Sobic002G292800 Sobic006G245900--Sobic002G292800 Sobic006G245900--Sobic007G145400 Sobic002G252100 Sobic002G252100 Sobic006G245900--Sobic002G252100 Sobic003G308500 Sobic003G308500 Sobic006G245900--Sobic003G308500 Sobic001G346900 Sobic001G346900 Sobic006G245900--Sobic001G346900 Sobic004G084400 Sobic004G084400 Sobic002G381900--Sobic004G084400 Sobic002G381900--Sobic001G308400 Sobic003G010900 Sobic003G010900 Sobic002G381900--Sobic003G010900 Sobic002G381900--Sobic003G256800 Sobic006G191200 Sobic006G191200 Sobic002G381900--Sobic006G191200 Sobic002G381900--Sobic005G114500 Sobic002G381900--Sobic009G254100 Sobic003G299500 Sobic003G299500 Sobic002G381900--Sobic003G299500 Sobic002G381900--Sobic004G031300 Sobic005G090300 Sobic005G090300 Sobic002G241600--Sobic005G090300 Sobic002G241600--Sobic001G308400 Sobic004G223300 Sobic004G223300 Sobic002G241600--Sobic004G223300 Sobic001G014300 Sobic001G014300 Sobic002G241600--Sobic001G014300 Sobic004G147500 Sobic004G147500 Sobic002G241600--Sobic004G147500 Sobic005G062200 Sobic005G062200 Sobic002G241600--Sobic005G062200 Sobic001G255800 Sobic001G255800 Sobic002G241600--Sobic001G255800 Sobic003G114400 Sobic003G114400 Sobic002G241600--Sobic003G114400 Sobic002G241600--Sobic001G097900 Sobic002G296400--Sobic006G191200 Sobic002G296400--Sobic006G245900 Sobic002G296400--Sobic002G363800 Sobic003G113300 Sobic003G113300 Sobic002G296400--Sobic003G113300 Sobic002G296400--Sobic001G308400 Sobic009G008200 Sobic009G008200 Sobic002G296400--Sobic009G008200 Sobic002G296400--Sobic003G256800 Sobic002G066800 Sobic002G066800 Sobic002G296400--Sobic002G066800 Sobic001G123600 Sobic001G123600 Sobic002G296400--Sobic001G123600
Octagon: transcription factors


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