Gene annotation
Transcriptome id Sobic.003G378100.2,Sobic.003G378100.1
Synonym Sb03g041780
Functional annotation expressed protein
UniProt A0A1B6Q7B7 , A0A1W0W0T3
Pfam PF00069
Panther DB PTHR27001 PTHR27001:SF231
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology K04730; interleukin-1 receptor-associated kinase 1
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G55200 : Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
RAP-DB (Rice) LOC_Os01g65940.1 : expressed protein
MaizeGDB (Corn) Zm00025a026567
Brachypodium PNT73316 , PNT73317
Barley HORVU3Hr1G091170.13 , HORVU3Hr1G091170.12 , HORVU3Hr1G091170.11 , HORVU3Hr1G091170.10 , HORVU3Hr1G091170.17 , HORVU3Hr1G091170.16 , HORVU3Hr1G091170.15 , HORVU3Hr1G091170.14 , HORVU3Hr1G091170.19 , HORVU3Hr1G091170.18 , HORVU3Hr1G091170.3 , HORVU3Hr1G091170.2 , HORVU3Hr1G091170.7 , HORVU3Hr1G091170.6 , HORVU3Hr1G091170.5 , HORVU3Hr1G091170.4 , HORVU3Hr1G091170.9 , HORVU3Hr1G091170.8 , HORVU3Hr1G091170.28 , HORVU3Hr1G091170.27 , HORVU3Hr1G091170.25 , HORVU3Hr1G091170.21 , HORVU3Hr1G091170.22 , HORVU3Hr1G091170.23 , HORVU3Hr1G091170.20 , HORVU3Hr1G091170.26 , HORVU3Hr1G091170.24
Wheat TraesCS3B02G440700 , TraesCS3D02G402800 , TraesCS3A02G407500 , TraesCS3A02G407500 , TraesCS3B02G440700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G245900 FAR1 family protein, expressed -
2 Sobic.001G125500 ethylene-insensitive protein, putative, expressed K14513: ethylene-insensitive protein 2
3 Sobic.002G048700 BT1 family protein, putative, expressed -
4 Sobic.004G040200 CGMC_MAPKCMGC_2_SLT2y_ERK.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
5 Sobic.010G016600 CAMK_CAMK_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
6 Sobic.003G413100 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed -
7 Sobic.008G097600 cyclin-T1-4, putative, expressed K15188: cyclin T
8 Sobic.003G297500 glucosidase 2 subunit beta precursor, putative, expressed K08288: protein kinase C substrate 80K-H
9 Sobic.003G433300 DNA mismatch repair protein Mlh1, putative, expressed K08734: DNA mismatch repair protein MLH1
10 Sobic.003G308500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed -
11 Sobic.002G043100 histone deacetylase, putative, expressed K11407: histone deacetylase 6
12 Sobic.002G296400 E3 ubiquitin-protein ligase HERC2, putative, expressed -
13 Sobic.007G102500 - -
14 Sobic.002G292800 MORN repeat domain containing protein, expressed -
15 Sobic.004G031300 PPR repeat domain containing protein, putative, expressed -
16 Sobic.001G308400 expressed protein -
17 Sobic.001G195932 - -
18 Sobic.006G267600 elongation factor Tu, putative, expressed K14416: elongation factor 1 alpha-like protein
19 Sobic.003G272700 transmembrane protein 16K, putative, expressed -
20 Sobic.002G252100 methyl-binding domain protein MBD, putative, expressed -


Gene co-expression network
sample Sobic003G378100 Sobic003G378100 Sobic006G245900 Sobic006G245900 Sobic003G378100--Sobic006G245900 Sobic001G125500 Sobic001G125500 Sobic003G378100--Sobic001G125500 Sobic002G048700 Sobic002G048700 Sobic003G378100--Sobic002G048700 Sobic004G040200 Sobic004G040200 Sobic003G378100--Sobic004G040200 Sobic010G016600 Sobic010G016600 Sobic003G378100--Sobic010G016600 Sobic003G413100 Sobic003G413100 Sobic003G378100--Sobic003G413100 Sobic008G097600 Sobic008G097600 Sobic003G378100--Sobic008G097600 Sobic003G297500 Sobic003G297500 Sobic003G378100--Sobic003G297500 Sobic003G433300 Sobic003G433300 Sobic003G378100--Sobic003G433300 Sobic002G371600 Sobic002G371600 Sobic006G245900--Sobic002G371600 Sobic002G296400 Sobic002G296400 Sobic006G245900--Sobic002G296400 Sobic004G031300 Sobic004G031300 Sobic006G245900--Sobic004G031300 Sobic007G016900 Sobic007G016900 Sobic006G245900--Sobic007G016900 Sobic002G292800 Sobic002G292800 Sobic006G245900--Sobic002G292800 Sobic007G145400 Sobic007G145400 Sobic006G245900--Sobic007G145400 Sobic002G252100 Sobic002G252100 Sobic006G245900--Sobic002G252100 Sobic003G308500 Sobic003G308500 Sobic006G245900--Sobic003G308500 Sobic001G346900 Sobic001G346900 Sobic006G245900--Sobic001G346900 Sobic003G230600 Sobic003G230600 Sobic001G125500--Sobic003G230600 Sobic002G363800 Sobic002G363800 Sobic001G125500--Sobic002G363800 Sobic009G128500 Sobic009G128500 Sobic001G125500--Sobic009G128500 Sobic003G256800 Sobic003G256800 Sobic001G125500--Sobic003G256800 Sobic001G308400 Sobic001G308400 Sobic001G125500--Sobic001G308400 Sobic001G125500--Sobic006G245900 Sobic002G381900 Sobic002G381900 Sobic001G125500--Sobic002G381900 Sobic002G241600 Sobic002G241600 Sobic001G125500--Sobic002G241600 Sobic001G125500--Sobic002G296400 Sobic006G261400 Sobic006G261400 Sobic002G048700--Sobic006G261400 Sobic006G267600 Sobic006G267600 Sobic002G048700--Sobic006G267600 Sobic001G051700 Sobic001G051700 Sobic002G048700--Sobic001G051700 Sobic003G416700 Sobic003G416700 Sobic002G048700--Sobic003G416700 Sobic002G048700--Sobic004G040200 Sobic002G425500 Sobic002G425500 Sobic002G048700--Sobic002G425500 Sobic001G111600 Sobic001G111600 Sobic002G048700--Sobic001G111600 Sobic007G183900 Sobic007G183900 Sobic002G048700--Sobic007G183900 Sobic008G002500 Sobic008G002500 Sobic002G048700--Sobic008G002500 Sobic004G332400 Sobic004G332400 Sobic004G040200--Sobic004G332400 Sobic006G040800 Sobic006G040800 Sobic004G040200--Sobic006G040800 Sobic004G040200--Sobic002G048700 Sobic004G040200--Sobic008G002500 Sobic009G255600 Sobic009G255600 Sobic004G040200--Sobic009G255600 Sobic002G361400 Sobic002G361400 Sobic004G040200--Sobic002G361400 Sobic007G225100 Sobic007G225100 Sobic004G040200--Sobic007G225100 Sobic004G040200--Sobic001G051700 Sobic004G123400 Sobic004G123400 Sobic004G040200--Sobic004G123400 Sobic010G094700 Sobic010G094700 Sobic010G016600--Sobic010G094700 Sobic010G016600--Sobic003G378100 Sobic002G008100 Sobic002G008100 Sobic010G016600--Sobic002G008100 Sobic002G043100 Sobic002G043100 Sobic010G016600--Sobic002G043100 Sobic004G318000 Sobic004G318000 Sobic010G016600--Sobic004G318000 Sobic010G079500 Sobic010G079500 Sobic010G016600--Sobic010G079500 Sobic007G075800 Sobic007G075800 Sobic010G016600--Sobic007G075800 Sobic004G030800 Sobic004G030800 Sobic010G016600--Sobic004G030800 Sobic001G393900 Sobic001G393900 Sobic010G016600--Sobic001G393900 Sobic001G155400 Sobic001G155400 Sobic003G413100--Sobic001G155400 Sobic003G413100--Sobic007G016900 Sobic010G096000 Sobic010G096000 Sobic003G413100--Sobic010G096000 Sobic001G373400 Sobic001G373400 Sobic003G413100--Sobic001G373400 Sobic003G413100--Sobic002G292800 Sobic003G413100--Sobic006G245900 Sobic004G345400 Sobic004G345400 Sobic003G413100--Sobic004G345400 Sobic009G040800 Sobic009G040800 Sobic003G413100--Sobic009G040800 Sobic001G042200 Sobic001G042200 Sobic003G413100--Sobic001G042200 Sobic008G097600--Sobic002G292800 Sobic010G155600 Sobic010G155600 Sobic008G097600--Sobic010G155600 Sobic008G097600--Sobic003G413100 Sobic001G032200 Sobic001G032200 Sobic008G097600--Sobic001G032200 Sobic009G020100 Sobic009G020100 Sobic008G097600--Sobic009G020100 Sobic008G097600--Sobic006G245900 Sobic007G211800 Sobic007G211800 Sobic008G097600--Sobic007G211800 Sobic001G258900 Sobic001G258900 Sobic008G097600--Sobic001G258900 Sobic009G107300 Sobic009G107300 Sobic008G097600--Sobic009G107300 Sobic009G228000 Sobic009G228000 Sobic003G297500--Sobic009G228000 Sobic009G260650 Sobic009G260650 Sobic003G297500--Sobic009G260650 Sobic003G297500--Sobic006G267600 Sobic003G297500--Sobic001G308400 Sobic003G297500--Sobic003G416700 Sobic006G281700 Sobic006G281700 Sobic003G297500--Sobic006G281700 Sobic003G297500--Sobic009G107300 Sobic002G154000 Sobic002G154000 Sobic003G297500--Sobic002G154000 Sobic004G072200 Sobic004G072200 Sobic003G297500--Sobic004G072200 Sobic003G433300--Sobic003G308500 Sobic003G433300--Sobic007G075800 Sobic001G098400 Sobic001G098400 Sobic003G433300--Sobic001G098400 Sobic003G433300--Sobic002G371600 Sobic003G433300--Sobic004G031300 Sobic006G125500 Sobic006G125500 Sobic003G433300--Sobic006G125500 Sobic005G045700 Sobic005G045700 Sobic003G433300--Sobic005G045700 Sobic003G433300--Sobic002G252100 Sobic010G264900 Sobic010G264900 Sobic003G433300--Sobic010G264900
Octagon: transcription factors


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