Gene annotation
Transcriptome id Sobic.010G016600.2,Sobic.010G016600.1,Sobic.010G016600.3
Synonym Sb10g001630
Functional annotation CAMK_CAMK_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt A0A1W0VR19 , A0A194YGS6
Pfam -
Panther DB PTHR13271 PTHR13271:SF41
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G01920 : SET domain-containing protein
RAP-DB (Rice) LOC_Os06g03676.1 : CAMK_CAMK_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a041341
Brachypodium KQK19647
Barley HORVU7Hr1G010570.3 , HORVU7Hr1G010490.3 , HORVU7Hr1G010490.2 , HORVU7Hr1G010490.1 , HORVU7Hr1G010490.7 , HORVU7Hr1G010490.6 , HORVU7Hr1G010490.5 , HORVU7Hr1G010490.4 , HORVU7Hr1G010490.9 , HORVU7Hr1G010490.8 , HORVU7Hr1G010490.13 , HORVU7Hr1G010490.12 , HORVU7Hr1G010490.11 , HORVU7Hr1G010490.10 , HORVU7Hr1G010490.17 , HORVU7Hr1G010490.16 , HORVU7Hr1G010490.15 , HORVU7Hr1G010490.14 , HORVU7Hr1G010490.19 , HORVU7Hr1G010490.18 , HORVU7Hr1G010490.20
Wheat TraesCS4A02G432200 , TraesCS4A02G432200 , TraesCS7D02G052800 , TraesCSU02G092000
Populus -


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cDNA sequences
Sobic.010G016600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G094700 aberrant root formation protein 4, putative, expressed -
2 Sobic.003G378100 expressed protein K04730: interleukin-1 receptor-associated kinase 1
3 Sobic.002G008100 VHS and GAT domain containing protein, expressed -
4 Sobic.002G043100 histone deacetylase, putative, expressed K11407: histone deacetylase 6
5 Sobic.004G318000 expressed protein -
6 Sobic.010G079500 PHD-finger domain containing protein, putative, expressed -
7 Sobic.007G075800 GTPase of unknown function domain containing protein, putative, expressed -
8 Sobic.004G030800 expressed protein -
9 Sobic.001G393900 FAD binding domain containing protein, expressed -
10 Sobic.006G267600 elongation factor Tu, putative, expressed K14416: elongation factor 1 alpha-like protein
11 Sobic.008G189900 NB-ARC domain containing protein, expressed -
12 Sobic.004G185800 expressed protein -
13 Sobic.002G048700 BT1 family protein, putative, expressed -
14 Sobic.004G321700 mitochondrial transcription termination factor family protein, putative, expressed K15032: mTERF domain-containing protein, mitochondrial
15 Sobic.005G191900 transporter family protein, putative, expressed -
16 Sobic.006G119400 SWIM zinc finger family protein, putative, expressed -
17 Sobic.002G031700 - -
18 Sobic.009G145101 - -
19 Sobic.005G074000 OsFBX411 - F-box domain containing protein, expressed -
20 Sobic.004G040200 CGMC_MAPKCMGC_2_SLT2y_ERK.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3


Gene co-expression network
sample Sobic010G016600 Sobic010G016600 Sobic010G094700 Sobic010G094700 Sobic010G016600--Sobic010G094700 Sobic003G378100 Sobic003G378100 Sobic010G016600--Sobic003G378100 Sobic002G008100 Sobic002G008100 Sobic010G016600--Sobic002G008100 Sobic002G043100 Sobic002G043100 Sobic010G016600--Sobic002G043100 Sobic004G318000 Sobic004G318000 Sobic010G016600--Sobic004G318000 Sobic010G079500 Sobic010G079500 Sobic010G016600--Sobic010G079500 Sobic007G075800 Sobic007G075800 Sobic010G016600--Sobic007G075800 Sobic004G030800 Sobic004G030800 Sobic010G016600--Sobic004G030800 Sobic001G393900 Sobic001G393900 Sobic010G016600--Sobic001G393900 Sobic005G191900 Sobic005G191900 Sobic010G094700--Sobic005G191900 Sobic009G109200 Sobic009G109200 Sobic010G094700--Sobic009G109200 Sobic010G279450 Sobic010G279450 Sobic010G094700--Sobic010G279450 Sobic010G094700--Sobic010G079500 Sobic001G529600 Sobic001G529600 Sobic010G094700--Sobic001G529600 Sobic004G096400 Sobic004G096400 Sobic010G094700--Sobic004G096400 Sobic001G311500 Sobic001G311500 Sobic010G094700--Sobic001G311500 Sobic008G132900 Sobic008G132900 Sobic010G094700--Sobic008G132900 Sobic010G094700--Sobic001G393900 Sobic006G245900 Sobic006G245900 Sobic003G378100--Sobic006G245900 Sobic001G125500 Sobic001G125500 Sobic003G378100--Sobic001G125500 Sobic002G048700 Sobic002G048700 Sobic003G378100--Sobic002G048700 Sobic004G040200 Sobic004G040200 Sobic003G378100--Sobic004G040200 Sobic003G378100--Sobic010G016600 Sobic003G413100 Sobic003G413100 Sobic003G378100--Sobic003G413100 Sobic008G097600 Sobic008G097600 Sobic003G378100--Sobic008G097600 Sobic003G297500 Sobic003G297500 Sobic003G378100--Sobic003G297500 Sobic003G433300 Sobic003G433300 Sobic003G378100--Sobic003G433300 Sobic003G166750 Sobic003G166750 Sobic002G008100--Sobic003G166750 Sobic009G165700 Sobic009G165700 Sobic002G008100--Sobic009G165700 Sobic008G087866 Sobic008G087866 Sobic002G008100--Sobic008G087866 Sobic003G362600 Sobic003G362600 Sobic002G008100--Sobic003G362600 Sobic010G226000 Sobic010G226000 Sobic002G008100--Sobic010G226000 Sobic003G170900 Sobic003G170900 Sobic002G008100--Sobic003G170900 Sobic004G185800 Sobic004G185800 Sobic002G008100--Sobic004G185800 Sobic002G008100--Sobic010G094700 Sobic002G211800 Sobic002G211800 Sobic002G008100--Sobic002G211800 Sobic004G107200 Sobic004G107200 Sobic002G043100--Sobic004G107200 Sobic001G451300 Sobic001G451300 Sobic002G043100--Sobic001G451300 Sobic001G501800 Sobic001G501800 Sobic002G043100--Sobic001G501800 Sobic002G399800 Sobic002G399800 Sobic002G043100--Sobic002G399800 Sobic010G262100 Sobic010G262100 Sobic002G043100--Sobic010G262100 Sobic006G269800 Sobic006G269800 Sobic002G043100--Sobic006G269800 Sobic003G309050 Sobic003G309050 Sobic002G043100--Sobic003G309050 Sobic002G425500 Sobic002G425500 Sobic002G043100--Sobic002G425500 Sobic002G043100--Sobic001G393900 Sobic003G182300 Sobic003G182300 Sobic004G318000--Sobic003G182300 Sobic002G242200 Sobic002G242200 Sobic004G318000--Sobic002G242200 Sobic003G016900 Sobic003G016900 Sobic004G318000--Sobic003G016900 Sobic003G062300 Sobic003G062300 Sobic004G318000--Sobic003G062300 Sobic001G276200 Sobic001G276200 Sobic004G318000--Sobic001G276200 Sobic003G363700 Sobic003G363700 Sobic004G318000--Sobic003G363700 Sobic004G309900 Sobic004G309900 Sobic004G318000--Sobic004G309900 Sobic001G492200 Sobic001G492200 Sobic004G318000--Sobic001G492200 Sobic010G176300 Sobic010G176300 Sobic004G318000--Sobic010G176300 Sobic010G079500--Sobic001G529600 Sobic002G316600 Sobic002G316600 Sobic010G079500--Sobic002G316600 Sobic010G079500--Sobic009G109200 Sobic001G230000 Sobic001G230000 Sobic010G079500--Sobic001G230000 Sobic006G119400 Sobic006G119400 Sobic010G079500--Sobic006G119400 Sobic001G527800 Sobic001G527800 Sobic010G079500--Sobic001G527800 Sobic003G196300 Sobic003G196300 Sobic010G079500--Sobic003G196300 Sobic010G079500--Sobic008G132900 Sobic003G260400 Sobic003G260400 Sobic010G079500--Sobic003G260400 Sobic002G031700 Sobic002G031700 Sobic007G075800--Sobic002G031700 Sobic002G155000 Sobic002G155000 Sobic007G075800--Sobic002G155000 Sobic004G025800 Sobic004G025800 Sobic007G075800--Sobic004G025800 Sobic007G075800--Sobic004G030800 Sobic008G165900 Sobic008G165900 Sobic007G075800--Sobic008G165900 Sobic006G128400 Sobic006G128400 Sobic007G075800--Sobic006G128400 Sobic008G051200 Sobic008G051200 Sobic007G075800--Sobic008G051200 Sobic006G049900 Sobic006G049900 Sobic007G075800--Sobic006G049900 Sobic002G318800 Sobic002G318800 Sobic007G075800--Sobic002G318800 Sobic010G003400 Sobic010G003400 Sobic004G030800--Sobic010G003400 Sobic001G052400 Sobic001G052400 Sobic004G030800--Sobic001G052400 Sobic004G030800--Sobic004G025800 Sobic004G030800--Sobic008G051200 Sobic004G030800--Sobic007G075800 Sobic004G030800--Sobic003G260400 Sobic009G101200 Sobic009G101200 Sobic004G030800--Sobic009G101200 Sobic010G053600 Sobic010G053600 Sobic004G030800--Sobic010G053600 Sobic001G004400 Sobic001G004400 Sobic004G030800--Sobic001G004400 Sobic004G321700 Sobic004G321700 Sobic001G393900--Sobic004G321700 Sobic006G267600 Sobic006G267600 Sobic001G393900--Sobic006G267600 Sobic001G089600 Sobic001G089600 Sobic001G393900--Sobic001G089600 Sobic001G393900--Sobic002G399800 Sobic001G393900--Sobic004G096400 Sobic007G173500 Sobic007G173500 Sobic001G393900--Sobic007G173500 Sobic001G393900--Sobic006G269800 Sobic001G393900--Sobic003G309050 Sobic003G042400 Sobic003G042400 Sobic001G393900--Sobic003G042400
Octagon: transcription factors


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