Gene annotation
Transcriptome id Sobic.004G318000.2,Sobic.004G318000.1
Synonym FIP1, Sb04g034890
Functional annotation expressed protein
UniProt C5XTL5 , A0A1Z5RPX9
Pfam PF14802
Panther DB PTHR31592
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G06005 : FRIGIDA interacting protein 1
RAP-DB (Rice) LOC_Os02g53780.1 : expressed protein
MaizeGDB (Corn) Zm00025a022342
Brachypodium KQK01629
Barley HORVU6Hr1G081380.22 , HORVU6Hr1G081380.21 , HORVU6Hr1G081380.20 , HORVU6Hr1G081380.8 , HORVU6Hr1G081380.9 , HORVU6Hr1G081380.4 , HORVU6Hr1G081380.5 , HORVU6Hr1G081380.6 , HORVU6Hr1G081380.7 , HORVU6Hr1G081380.1 , HORVU6Hr1G081380.2 , HORVU6Hr1G081380.3 , HORVU6Hr1G081380.18 , HORVU6Hr1G081380.19 , HORVU6Hr1G081380.16 , HORVU6Hr1G081380.17 , HORVU6Hr1G081380.14 , HORVU6Hr1G081380.15 , HORVU6Hr1G081380.12 , HORVU6Hr1G081380.13 , HORVU6Hr1G081380.10 , HORVU6Hr1G081380.11
Wheat TraesCS6A02G336900 , TraesCS6D02G317300 , TraesCS6D02G317300 , TraesCS6B02G367400 , TraesCS6A02G336900 , TraesCS6B02G367400
Populus PNS92835 , PNS92834 , PNS92833 , PNS92832


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G182300 zinc finger family protein, putative, expressed K16284: E3 ubiquitin-protein ligase SIS3
2 Sobic.002G242200 expressed protein -
3 Sobic.003G016900 splicing factor 3B subunit 1, putative, expressed K12828: SF3B1, splicing factor 3B subunit 1
4 Sobic.003G062300 NF-X1-type zinc finger protein, putative, expressed K15683: NFXL1, NF-X1-type zinc finger protein NFXL1
5 Sobic.001G276200 ACI13, putative, expressed -
6 Sobic.003G363700 OsFBL5 - F-box domain and LRR containing protein, expressed -
7 Sobic.004G309900 cold-induced protein, putative, expressed K13174: THO complex subunit 5
8 Sobic.001G492200 OsFBK11 - F-box domain and kelch repeat containing protein, expressed -
9 Sobic.010G176300 histone deacetylase 19, putative, expressed K06067: histone deacetylase 1/2
10 Sobic.005G191700 RNA recognition motif containing protein, putative, expressed K13201: TIA1, nucleolysin TIA-1/TIAR
11 Sobic.003G012000 GTPase of unknown function domain containing protein, putative, expressed -
12 Sobic.004G321700 mitochondrial transcription termination factor family protein, putative, expressed K15032: mTERF domain-containing protein, mitochondrial
13 Sobic.003G362900 Transcription initiation factor TFIID subunit A containing protein, expressed K03126: transcription initiation factor TFIID subunit 12
14 Sobic.004G092600 NOL1/NOP2/sun family protein, putative, expressed K15264: NSUN5, WBSCR20, 25S rRNA (cytosine2278-C5)-methyltransferase
15 Sobic.010G016600 CAMK_CAMK_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
16 Sobic.001G393900 FAD binding domain containing protein, expressed -
17 Sobic.004G096400 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
18 Sobic.001G386100 RNA recognition motif containing protein, putative, expressed K13157: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
19 Sobic.001G019800 FAD binding domain containing protein, expressed K06126: ubiquinone biosynthesis monooxygenase Coq6
20 Sobic.002G369701 - K06877: DEAD/DEAH box helicase domain-containing protein


Gene co-expression network
sample Sobic004G318000 Sobic004G318000 Sobic003G182300 Sobic003G182300 Sobic004G318000--Sobic003G182300 Sobic002G242200 Sobic002G242200 Sobic004G318000--Sobic002G242200 Sobic003G016900 Sobic003G016900 Sobic004G318000--Sobic003G016900 Sobic003G062300 Sobic003G062300 Sobic004G318000--Sobic003G062300 Sobic001G276200 Sobic001G276200 Sobic004G318000--Sobic001G276200 Sobic003G363700 Sobic003G363700 Sobic004G318000--Sobic003G363700 Sobic004G309900 Sobic004G309900 Sobic004G318000--Sobic004G309900 Sobic001G492200 Sobic001G492200 Sobic004G318000--Sobic001G492200 Sobic010G176300 Sobic010G176300 Sobic004G318000--Sobic010G176300 Sobic010G223400 Sobic010G223400 Sobic003G182300--Sobic010G223400 Sobic003G182300--Sobic003G363700 Sobic001G449900 Sobic001G449900 Sobic003G182300--Sobic001G449900 Sobic001G474400 Sobic001G474400 Sobic003G182300--Sobic001G474400 Sobic003G193500 Sobic003G193500 Sobic003G182300--Sobic003G193500 Sobic010G169900 Sobic010G169900 Sobic003G182300--Sobic010G169900 Sobic001G015400 Sobic001G015400 Sobic003G182300--Sobic001G015400 Sobic007G042900 Sobic007G042900 Sobic003G182300--Sobic007G042900 Sobic003G181700 Sobic003G181700 Sobic003G182300--Sobic003G181700 Sobic007G097900 Sobic007G097900 Sobic002G242200--Sobic007G097900 Sobic005G160400 Sobic005G160400 Sobic002G242200--Sobic005G160400 Sobic003G127300 Sobic003G127300 Sobic002G242200--Sobic003G127300 Sobic003G299000 Sobic003G299000 Sobic002G242200--Sobic003G299000 Sobic010G092300 Sobic010G092300 Sobic002G242200--Sobic010G092300 Sobic001G207500 Sobic001G207500 Sobic002G242200--Sobic001G207500 Sobic010G265300 Sobic010G265300 Sobic002G242200--Sobic010G265300 Sobic002G242200--Sobic004G318000 Sobic002G009200 Sobic002G009200 Sobic002G242200--Sobic002G009200 Sobic007G173500 Sobic007G173500 Sobic003G016900--Sobic007G173500 Sobic003G016900--Sobic004G309900 Sobic007G000300 Sobic007G000300 Sobic003G016900--Sobic007G000300 Sobic006G088200 Sobic006G088200 Sobic003G016900--Sobic006G088200 Sobic003G016900--Sobic003G062300 Sobic010G094700 Sobic010G094700 Sobic003G016900--Sobic010G094700 Sobic001G393900 Sobic001G393900 Sobic003G016900--Sobic001G393900 Sobic003G133900 Sobic003G133900 Sobic003G016900--Sobic003G133900 Sobic009G228000 Sobic009G228000 Sobic003G016900--Sobic009G228000 Sobic006G224800 Sobic006G224800 Sobic003G062300--Sobic006G224800 Sobic003G062300--Sobic004G309900 Sobic002G145800 Sobic002G145800 Sobic003G062300--Sobic002G145800 Sobic003G416700 Sobic003G416700 Sobic003G062300--Sobic003G416700 Sobic005G220000 Sobic005G220000 Sobic003G062300--Sobic005G220000 Sobic001G051700 Sobic001G051700 Sobic003G062300--Sobic001G051700 Sobic002G164200 Sobic002G164200 Sobic003G062300--Sobic002G164200 Sobic003G214600 Sobic003G214600 Sobic003G062300--Sobic003G214600 Sobic007G183300 Sobic007G183300 Sobic003G062300--Sobic007G183300 Sobic006G077200 Sobic006G077200 Sobic001G276200--Sobic006G077200 Sobic001G276200--Sobic001G449900 Sobic001G493200 Sobic001G493200 Sobic001G276200--Sobic001G493200 Sobic003G249600 Sobic003G249600 Sobic001G276200--Sobic003G249600 Sobic004G096400 Sobic004G096400 Sobic001G276200--Sobic004G096400 Sobic006G207200 Sobic006G207200 Sobic001G276200--Sobic006G207200 Sobic003G405500 Sobic003G405500 Sobic001G276200--Sobic003G405500 Sobic003G057700 Sobic003G057700 Sobic001G276200--Sobic003G057700 Sobic007G097400 Sobic007G097400 Sobic001G276200--Sobic007G097400 Sobic003G379200 Sobic003G379200 Sobic003G363700--Sobic003G379200 Sobic001G237600 Sobic001G237600 Sobic003G363700--Sobic001G237600 Sobic004G265500 Sobic004G265500 Sobic003G363700--Sobic004G265500 Sobic002G371700 Sobic002G371700 Sobic003G363700--Sobic002G371700 Sobic003G363700--Sobic009G228000 Sobic002G374300 Sobic002G374300 Sobic003G363700--Sobic002G374300 Sobic003G043000 Sobic003G043000 Sobic003G363700--Sobic003G043000 Sobic010G000800 Sobic010G000800 Sobic003G363700--Sobic010G000800 Sobic003G363700--Sobic003G182300 Sobic004G309900--Sobic003G133900 Sobic007G183900 Sobic007G183900 Sobic004G309900--Sobic007G183900 Sobic004G309900--Sobic003G062300 Sobic004G309900--Sobic006G077200 Sobic004G309900--Sobic004G096400 Sobic002G366400 Sobic002G366400 Sobic004G309900--Sobic002G366400 Sobic006G210000 Sobic006G210000 Sobic004G309900--Sobic006G210000 Sobic004G309900--Sobic003G416700 Sobic001G008200 Sobic001G008200 Sobic004G309900--Sobic001G008200 Sobic001G492200--Sobic003G363700 Sobic001G492200--Sobic003G182300 Sobic006G270600 Sobic006G270600 Sobic001G492200--Sobic006G270600 Sobic008G103300 Sobic008G103300 Sobic001G492200--Sobic008G103300 Sobic001G395100 Sobic001G395100 Sobic001G492200--Sobic001G395100 Sobic001G492200--Sobic001G449900 Sobic001G492200--Sobic004G309900 Sobic002G295500 Sobic002G295500 Sobic001G492200--Sobic002G295500 Sobic004G155600 Sobic004G155600 Sobic001G492200--Sobic004G155600 Sobic001G501300 Sobic001G501300 Sobic010G176300--Sobic001G501300 Sobic003G212100 Sobic003G212100 Sobic010G176300--Sobic003G212100 Sobic010G176300--Sobic001G276200 Sobic002G428800 Sobic002G428800 Sobic010G176300--Sobic002G428800 Sobic003G134000 Sobic003G134000 Sobic010G176300--Sobic003G134000 Sobic006G089400 Sobic006G089400 Sobic010G176300--Sobic006G089400 Sobic001G070700 Sobic001G070700 Sobic010G176300--Sobic001G070700 Sobic010G176300--Sobic004G318000 Sobic010G100800 Sobic010G100800 Sobic010G176300--Sobic010G100800
Octagon: transcription factors


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