Gene annotation
Transcriptome id Sobic.002G363800.1,Sobic.002G363800.2,Sobic.002G363800.3
Synonym
Functional annotation expressed protein
UniProt A0A1B6QFC9 , A0A1W0W779 , C6JSN6 , A0A1B6QFE6
Pfam PF16501
Panther DB PTHR31434 PTHR31434:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g12876.1 : expressed protein
MaizeGDB (Corn) Zm00025a015097
Brachypodium PNT74825 , KQK15410 , KQK15411
Barley HORVU2Hr1G034130.15 , HORVU2Hr1G034130.13 , HORVU2Hr1G034130.12 , HORVU2Hr1G034130.11 , HORVU2Hr1G034130.10 , HORVU2Hr1G034130.14 , HORVU2Hr1G034130.9 , HORVU2Hr1G034130.8 , HORVU2Hr1G034130.7 , HORVU2Hr1G034130.6 , HORVU2Hr1G034130.5 , HORVU2Hr1G034130.4 , HORVU2Hr1G034130.3 , HORVU2Hr1G034130.2 , HORVU2Hr1G034130.1
Wheat TraesCS2D02G189500 , TraesCS2D02G189500 , TraesCS2D02G189500 , TraesCS2A02G181800 , TraesCS2B02G208200 , TraesCS2B02G208200 , TraesCS2B02G208200 , TraesCS2A02G181800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G296400 E3 ubiquitin-protein ligase HERC2, putative, expressed -
2 Sobic.002G371600 Spc97 / Spc98 family protein, putative, expressed K16572: TUBGCP5, gamma-tubulin complex component 5
3 Sobic.001G125500 ethylene-insensitive protein, putative, expressed K14513: ethylene-insensitive protein 2
4 Sobic.001G097900 expressed protein -
5 Sobic.003G256800 RNA polymerase III subunit RPC82 family protein, putative, expressed K03023: RPC3, DNA-directed RNA polymerase III subunit RPC3
6 Sobic.008G092800 expressed protein -
7 Sobic.007G145400 expressed protein -
8 Sobic.001G340000 zinc finger, C3HC4 type domain containing protein, expressed K10696: E3 ubiquitin-protein ligase BRE1
9 Sobic.003G230600 transcription factor X1, putative, expressed -
10 Sobic.006G106300 - K17675: SUPV3L1, ATP-dependent RNA helicase SUPV3L1/SUV3
11 Sobic.009G040325 - -
12 Sobic.006G245900 FAR1 family protein, expressed -
13 Sobic.008G037700 pentatricopeptide containing protein, putative, expressed -
14 Sobic.005G114500 growth regulator related protein, putative, expressed -
15 Sobic.002G426100 aldehyde dehydrogenase, putative, expressed -
16 Sobic.002G227500 protein transport protein, putative, expressed K14006: protein transport protein SEC23
17 Sobic.002G141200 expressed protein -
18 Sobic.006G224100 expressed protein -
19 Sobic.003G143800 nodal modulator 1 precursor, putative, expressed -
20 Sobic.002G066800 RNA ligase isoform 1, putative, expressed -


Gene co-expression network
sample Sobic002G363800 Sobic002G363800 Sobic002G296400 Sobic002G296400 Sobic002G363800--Sobic002G296400 Sobic002G371600 Sobic002G371600 Sobic002G363800--Sobic002G371600 Sobic001G125500 Sobic001G125500 Sobic002G363800--Sobic001G125500 Sobic001G097900 Sobic001G097900 Sobic002G363800--Sobic001G097900 Sobic003G256800 Sobic003G256800 Sobic002G363800--Sobic003G256800 Sobic008G092800 Sobic008G092800 Sobic002G363800--Sobic008G092800 Sobic007G145400 Sobic007G145400 Sobic002G363800--Sobic007G145400 Sobic001G340000 Sobic001G340000 Sobic002G363800--Sobic001G340000 Sobic003G230600 Sobic003G230600 Sobic002G363800--Sobic003G230600 Sobic006G191200 Sobic006G191200 Sobic002G296400--Sobic006G191200 Sobic006G245900 Sobic006G245900 Sobic002G296400--Sobic006G245900 Sobic002G296400--Sobic002G363800 Sobic003G113300 Sobic003G113300 Sobic002G296400--Sobic003G113300 Sobic001G308400 Sobic001G308400 Sobic002G296400--Sobic001G308400 Sobic009G008200 Sobic009G008200 Sobic002G296400--Sobic009G008200 Sobic002G296400--Sobic003G256800 Sobic002G066800 Sobic002G066800 Sobic002G296400--Sobic002G066800 Sobic001G123600 Sobic001G123600 Sobic002G296400--Sobic001G123600 Sobic001G373800 Sobic001G373800 Sobic002G371600--Sobic001G373800 Sobic006G029100 Sobic006G029100 Sobic002G371600--Sobic006G029100 Sobic002G371600--Sobic006G245900 Sobic004G356200 Sobic004G356200 Sobic002G371600--Sobic004G356200 Sobic003G308500 Sobic003G308500 Sobic002G371600--Sobic003G308500 Sobic002G160700 Sobic002G160700 Sobic002G371600--Sobic002G160700 Sobic003G052800 Sobic003G052800 Sobic002G371600--Sobic003G052800 Sobic001G451300 Sobic001G451300 Sobic002G371600--Sobic001G451300 Sobic010G262100 Sobic010G262100 Sobic002G371600--Sobic010G262100 Sobic001G125500--Sobic003G230600 Sobic001G125500--Sobic002G363800 Sobic009G128500 Sobic009G128500 Sobic001G125500--Sobic009G128500 Sobic001G125500--Sobic003G256800 Sobic001G125500--Sobic001G308400 Sobic001G125500--Sobic006G245900 Sobic002G381900 Sobic002G381900 Sobic001G125500--Sobic002G381900 Sobic002G241600 Sobic002G241600 Sobic001G125500--Sobic002G241600 Sobic001G125500--Sobic002G296400 Sobic010G192600 Sobic010G192600 Sobic001G097900--Sobic010G192600 Sobic001G474400 Sobic001G474400 Sobic001G097900--Sobic001G474400 Sobic001G445500 Sobic001G445500 Sobic001G097900--Sobic001G445500 Sobic006G106300 Sobic006G106300 Sobic001G097900--Sobic006G106300 Sobic005G110499 Sobic005G110499 Sobic001G097900--Sobic005G110499 Sobic002G227500 Sobic002G227500 Sobic001G097900--Sobic002G227500 Sobic001G097900--Sobic001G308400 Sobic009G040250 Sobic009G040250 Sobic001G097900--Sobic009G040250 Sobic005G114500 Sobic005G114500 Sobic001G097900--Sobic005G114500 Sobic009G254100 Sobic009G254100 Sobic003G256800--Sobic009G254100 Sobic003G256800--Sobic002G227500 Sobic003G021600 Sobic003G021600 Sobic003G256800--Sobic003G021600 Sobic003G012000 Sobic003G012000 Sobic003G256800--Sobic003G012000 Sobic003G256800--Sobic006G029100 Sobic003G256800--Sobic002G296400 Sobic003G256800--Sobic002G363800 Sobic003G256800--Sobic001G097900 Sobic002G398700 Sobic002G398700 Sobic003G256800--Sobic002G398700 Sobic003G143800 Sobic003G143800 Sobic008G092800--Sobic003G143800 Sobic008G092800--Sobic007G145400 Sobic003G016500 Sobic003G016500 Sobic008G092800--Sobic003G016500 Sobic001G248100 Sobic001G248100 Sobic008G092800--Sobic001G248100 Sobic008G092800--Sobic010G262100 Sobic001G437400 Sobic001G437400 Sobic008G092800--Sobic001G437400 Sobic007G047600 Sobic007G047600 Sobic008G092800--Sobic007G047600 Sobic006G181800 Sobic006G181800 Sobic008G092800--Sobic006G181800 Sobic008G092800--Sobic002G371600 Sobic007G145400--Sobic001G474400 Sobic009G003700 Sobic009G003700 Sobic007G145400--Sobic009G003700 Sobic007G145400--Sobic001G248100 Sobic002G119600 Sobic002G119600 Sobic007G145400--Sobic002G119600 Sobic006G261400 Sobic006G261400 Sobic007G145400--Sobic006G261400 Sobic003G314700 Sobic003G314700 Sobic007G145400--Sobic003G314700 Sobic001G467100 Sobic001G467100 Sobic007G145400--Sobic001G467100 Sobic007G145400--Sobic008G092800 Sobic007G145400--Sobic006G245900 Sobic005G061900 Sobic005G061900 Sobic001G340000--Sobic005G061900 Sobic003G043000 Sobic003G043000 Sobic001G340000--Sobic003G043000 Sobic001G340000--Sobic002G363800 Sobic001G340000--Sobic003G256800 Sobic004G265500 Sobic004G265500 Sobic001G340000--Sobic004G265500 Sobic001G030000 Sobic001G030000 Sobic001G340000--Sobic001G030000 Sobic003G163200 Sobic003G163200 Sobic001G340000--Sobic003G163200 Sobic006G026250 Sobic006G026250 Sobic001G340000--Sobic006G026250 Sobic010G273300 Sobic010G273300 Sobic001G340000--Sobic010G273300 Sobic003G230600--Sobic005G114500 Sobic003G230600--Sobic001G125500 Sobic003G230600--Sobic009G128500 Sobic003G230600--Sobic001G308400 Sobic003G230600--Sobic007G145400 Sobic003G230600--Sobic008G092800 Sobic003G230600--Sobic003G143800 Sobic003G230600--Sobic002G363800 Sobic001G097500 Sobic001G097500 Sobic003G230600--Sobic001G097500
Octagon: transcription factors


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