Gene annotation
Transcriptome id Sobic.006G224100.1
Synonym ROS1, DML1, Sb06g029335
Functional annotation expressed protein
UniProt A0A1B6PNC0
Pfam PF15628
Panther DB PTHR10359:SF30 PTHR10359
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G36490 : demeter-like 1
RAP-DB (Rice) LOC_Os02g29380.1 : expressed protein
MaizeGDB (Corn) Zm00025a020361
Brachypodium -
Barley HORVU3Hr1G003060.14 , HORVU3Hr1G003060.15 , HORVU3Hr1G003060.16 , HORVU3Hr1G003060.17 , HORVU3Hr1G003060.10 , HORVU3Hr1G003060.11 , HORVU3Hr1G003060.12 , HORVU3Hr1G003060.13 , HORVU3Hr1G003060.18 , HORVU3Hr1G003060.19 , HORVU3Hr1G003060.8 , HORVU3Hr1G003060.9 , HORVU3Hr1G003060.7 , HORVU3Hr1G003060.4 , HORVU3Hr1G003060.5 , HORVU3Hr1G003060.2 , HORVU3Hr1G003060.3 , HORVU3Hr1G003060.1
Wheat TraesCS3B02G023200 , TraesCS3B02G023200 , TraesCS3D02G024100 , TraesCS3A02G022500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G043000 expressed protein -
2 Sobic.009G107300 3\'-5\' exonuclease, putative, expressed -
3 Sobic.003G021600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K13117: ATP-dependent RNA helicase DDX35
4 Sobic.009G040325 - -
5 Sobic.004G265500 SET domain protein SDG117, putative, expressed -
6 Sobic.002G227500 protein transport protein, putative, expressed K14006: protein transport protein SEC23
7 Sobic.001G118000 phosphatidylinositol 4-kinase PI4K, putative, expressed K00888: phosphatidylinositol 4-kinase A
8 Sobic.002G363800 expressed protein -
9 Sobic.003G241700 SET domain containing protein, expressed -
10 Sobic.004G097900 expressed protein -
11 Sobic.003G256800 RNA polymerase III subunit RPC82 family protein, putative, expressed K03023: RPC3, DNA-directed RNA polymerase III subunit RPC3
12 Sobic.004G106250 - -
13 Sobic.003G016500 histone-lysine N-methyltransferase ATX5, putative, expressed -
14 Sobic.004G357100 expressed protein -
15 Sobic.003G310300 pentatricopeptide repeat domain containing protein, putative, expressed -
16 Sobic.002G292800 MORN repeat domain containing protein, expressed -
17 Sobic.004G122900 gamma-secretase subunit APH-1B, putative, expressed -
18 Sobic.006G029100 actin, putative, expressed K11673: ACTR8, ARP8, actin-related protein 8
19 Sobic.001G308400 expressed protein -
20 Sobic.001G376200 auxin response factor, putative, expressed -


Gene co-expression network
sample Sobic006G224100 Sobic006G224100 Sobic003G043000 Sobic003G043000 Sobic006G224100--Sobic003G043000 Sobic009G107300 Sobic009G107300 Sobic006G224100--Sobic009G107300 Sobic003G021600 Sobic003G021600 Sobic006G224100--Sobic003G021600 Sobic009G040325 Sobic009G040325 Sobic006G224100--Sobic009G040325 Sobic004G265500 Sobic004G265500 Sobic006G224100--Sobic004G265500 Sobic002G227500 Sobic002G227500 Sobic006G224100--Sobic002G227500 Sobic001G118000 Sobic001G118000 Sobic006G224100--Sobic001G118000 Sobic002G363800 Sobic002G363800 Sobic006G224100--Sobic002G363800 Sobic003G241700 Sobic003G241700 Sobic006G224100--Sobic003G241700 Sobic003G043000--Sobic004G265500 Sobic001G308400 Sobic001G308400 Sobic003G043000--Sobic001G308400 Sobic003G296900 Sobic003G296900 Sobic003G043000--Sobic003G296900 Sobic004G357100 Sobic004G357100 Sobic003G043000--Sobic004G357100 Sobic003G043000--Sobic003G241700 Sobic009G228000 Sobic009G228000 Sobic003G043000--Sobic009G228000 SobicK028600 SobicK028600 Sobic003G043000--SobicK028600 Sobic003G163200 Sobic003G163200 Sobic003G043000--Sobic003G163200 Sobic003G043000--Sobic002G227500 Sobic009G107300--Sobic009G228000 Sobic007G087000 Sobic007G087000 Sobic009G107300--Sobic007G087000 Sobic004G240400 Sobic004G240400 Sobic009G107300--Sobic004G240400 Sobic008G116700 Sobic008G116700 Sobic009G107300--Sobic008G116700 Sobic009G107300--Sobic003G043000 Sobic004G198600 Sobic004G198600 Sobic009G107300--Sobic004G198600 Sobic003G120300 Sobic003G120300 Sobic009G107300--Sobic003G120300 Sobic003G181700 Sobic003G181700 Sobic009G107300--Sobic003G181700 Sobic001G156900 Sobic001G156900 Sobic009G107300--Sobic001G156900 Sobic009G194000 Sobic009G194000 Sobic003G021600--Sobic009G194000 Sobic003G021600--Sobic003G181700 Sobic003G190200 Sobic003G190200 Sobic003G021600--Sobic003G190200 Sobic003G021600--Sobic002G227500 Sobic003G021600--Sobic009G040325 Sobic009G040250 Sobic009G040250 Sobic003G021600--Sobic009G040250 Sobic003G394500 Sobic003G394500 Sobic003G021600--Sobic003G394500 Sobic003G021600--Sobic001G308400 Sobic001G043200 Sobic001G043200 Sobic003G021600--Sobic001G043200 Sobic009G040325--Sobic009G040250 Sobic009G040325--Sobic003G021600 Sobic009G040325--Sobic001G043200 Sobic006G119900 Sobic006G119900 Sobic009G040325--Sobic006G119900 Sobic007G105700 Sobic007G105700 Sobic009G040325--Sobic007G105700 Sobic006G012300 Sobic006G012300 Sobic009G040325--Sobic006G012300 Sobic003G420400 Sobic003G420400 Sobic009G040325--Sobic003G420400 Sobic007G030100 Sobic007G030100 Sobic009G040325--Sobic007G030100 Sobic009G040325--Sobic003G394500 Sobic004G265500--Sobic003G043000 Sobic004G265500--Sobic003G163200 Sobic004G265500--Sobic001G308400 Sobic004G265500--Sobic004G357100 Sobic010G000800 Sobic010G000800 Sobic004G265500--Sobic010G000800 Sobic002G042600 Sobic002G042600 Sobic004G265500--Sobic002G042600 Sobic004G053500 Sobic004G053500 Sobic004G265500--Sobic004G053500 Sobic004G265500--SobicK028600 Sobic004G265500--Sobic002G227500 Sobic002G227500--Sobic001G308400 Sobic002G227500--Sobic003G021600 Sobic002G227500--Sobic001G156900 Sobic010G169900 Sobic010G169900 Sobic002G227500--Sobic010G169900 Sobic002G227500--Sobic004G265500 Sobic002G227500--Sobic003G043000 Sobic003G405500 Sobic003G405500 Sobic002G227500--Sobic003G405500 Sobic002G227500--Sobic003G181700 Sobic010G059500 Sobic010G059500 Sobic002G227500--Sobic010G059500 Sobic005G059500 Sobic005G059500 Sobic001G118000--Sobic005G059500 Sobic009G122500 Sobic009G122500 Sobic001G118000--Sobic009G122500 Sobic010G223400 Sobic010G223400 Sobic001G118000--Sobic010G223400 Sobic003G334700 Sobic003G334700 Sobic001G118000--Sobic003G334700 Sobic007G172700 Sobic007G172700 Sobic001G118000--Sobic007G172700 Sobic001G118000--Sobic001G308400 Sobic004G060300 Sobic004G060300 Sobic001G118000--Sobic004G060300 Sobic001G118000--Sobic009G040325 Sobic001G118000--Sobic001G156900 Sobic002G296400 Sobic002G296400 Sobic002G363800--Sobic002G296400 Sobic002G371600 Sobic002G371600 Sobic002G363800--Sobic002G371600 Sobic001G125500 Sobic001G125500 Sobic002G363800--Sobic001G125500 Sobic001G097900 Sobic001G097900 Sobic002G363800--Sobic001G097900 Sobic003G256800 Sobic003G256800 Sobic002G363800--Sobic003G256800 Sobic008G092800 Sobic008G092800 Sobic002G363800--Sobic008G092800 Sobic007G145400 Sobic007G145400 Sobic002G363800--Sobic007G145400 Sobic001G340000 Sobic001G340000 Sobic002G363800--Sobic001G340000 Sobic003G230600 Sobic003G230600 Sobic002G363800--Sobic003G230600 Sobic003G241700--Sobic003G043000 Sobic003G241700--Sobic003G296900 Sobic003G241700--Sobic009G228000 Sobic004G209700 Sobic004G209700 Sobic003G241700--Sobic004G209700 Sobic003G241700--Sobic004G265500 Sobic003G241700--Sobic010G000800 Sobic006G234700 Sobic006G234700 Sobic003G241700--Sobic006G234700 Sobic004G213800 Sobic004G213800 Sobic003G241700--Sobic004G213800 Sobic010G034100 Sobic010G034100 Sobic003G241700--Sobic010G034100
Octagon: transcription factors


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