Gene annotation
Transcriptome id Sobic.008G092800.2,Sobic.008G092800.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6PCH4 , A0A1Z5R5P2
Pfam PF09336 PF00004
Panther DB PTHR23074 PTHR23074:SF17
NCBI CDD KOG0740; AAA+-type ATPase
KEGG Orthology -
Gene Ontology GO:0005524; ATP binding


Orthologs (automatic annotation)
TAIR AT3G27120 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os12g25720.1 : expressed protein
MaizeGDB (Corn) Zm00025a024944
Brachypodium KQJ86811 , KQJ86810 , PNT62758 , PNT62759
Barley HORVU5Hr1G029910.8 , HORVU5Hr1G029910.9 , HORVU5Hr1G029910.3 , HORVU5Hr1G029910.4 , HORVU5Hr1G029910.7 , HORVU5Hr1G029910.12 , HORVU5Hr1G029910.13 , HORVU5Hr1G029910.10 , HORVU5Hr1G029910.11 , HORVU5Hr1G029910.16 , HORVU5Hr1G029910.17 , HORVU5Hr1G029910.14 , HORVU5Hr1G029910.15 , HORVU5Hr1G029910.1 , HORVU5Hr1G029910.2 , HORVU5Hr1G029910.5 , HORVU5Hr1G029910.6
Wheat TraesCS5D02G123800 , TraesCS5D02G123800 , TraesCS5D02G123800 , TraesCS5B02G110300 , TraesCS5A02G109500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G143800 nodal modulator 1 precursor, putative, expressed -
2 Sobic.007G145400 expressed protein -
3 Sobic.003G016500 histone-lysine N-methyltransferase ATX5, putative, expressed -
4 Sobic.001G248100 histone acetyltransferase GCN5, putative, expressed K06062: PCAF, KAT2, histone acetyltransferase
5 Sobic.010G262100 expressed protein -
6 Sobic.001G437400 guanine nucleotide exchange family protein, putative, expressed K18442: ARFGEF, brefeldin A-inhibited guanine nucleotide-exchange protein
7 Sobic.007G047600 expressed protein -
8 Sobic.006G181800 gamma-tubulin complex component 6, putative, expressed K16573: TUBGCP6, gamma-tubulin complex component 6
9 Sobic.002G371600 Spc97 / Spc98 family protein, putative, expressed K16572: TUBGCP5, gamma-tubulin complex component 5
10 Sobic.002G363800 expressed protein -
11 Sobic.008G080500 expressed protein -
12 Sobic.002G119600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
13 Sobic.003G230600 transcription factor X1, putative, expressed -
14 Sobic.006G112700 ATPOT1, putative, expressed -
15 Sobic.006G029100 actin, putative, expressed K11673: ACTR8, ARP8, actin-related protein 8
16 Sobic.003G299500 expressed protein -
17 Sobic.006G245900 FAR1 family protein, expressed -
18 Sobic.003G250900 AAA-type ATPase family protein, putative, expressed -
19 Sobic.002G412700 histone-arginine methyltransferase CARM1, putative, expressed K05931: CARM1, type I protein arginine methyltransferase
20 Sobic.003G135500 sugar transporter superfamily, putative, expressed -


Gene co-expression network
sample Sobic008G092800 Sobic008G092800 Sobic003G143800 Sobic003G143800 Sobic008G092800--Sobic003G143800 Sobic007G145400 Sobic007G145400 Sobic008G092800--Sobic007G145400 Sobic003G016500 Sobic003G016500 Sobic008G092800--Sobic003G016500 Sobic001G248100 Sobic001G248100 Sobic008G092800--Sobic001G248100 Sobic010G262100 Sobic010G262100 Sobic008G092800--Sobic010G262100 Sobic001G437400 Sobic001G437400 Sobic008G092800--Sobic001G437400 Sobic007G047600 Sobic007G047600 Sobic008G092800--Sobic007G047600 Sobic006G181800 Sobic006G181800 Sobic008G092800--Sobic006G181800 Sobic002G371600 Sobic002G371600 Sobic008G092800--Sobic002G371600 Sobic008G124800 Sobic008G124800 Sobic003G143800--Sobic008G124800 Sobic006G021700 Sobic006G021700 Sobic003G143800--Sobic006G021700 Sobic001G015400 Sobic001G015400 Sobic003G143800--Sobic001G015400 Sobic007G155500 Sobic007G155500 Sobic003G143800--Sobic007G155500 Sobic003G143800--Sobic008G092800 Sobic002G340900 Sobic002G340900 Sobic003G143800--Sobic002G340900 Sobic004G141800 Sobic004G141800 Sobic003G143800--Sobic004G141800 Sobic005G114500 Sobic005G114500 Sobic003G143800--Sobic005G114500 Sobic003G405500 Sobic003G405500 Sobic003G143800--Sobic003G405500 Sobic001G474400 Sobic001G474400 Sobic007G145400--Sobic001G474400 Sobic009G003700 Sobic009G003700 Sobic007G145400--Sobic009G003700 Sobic007G145400--Sobic001G248100 Sobic002G119600 Sobic002G119600 Sobic007G145400--Sobic002G119600 Sobic006G261400 Sobic006G261400 Sobic007G145400--Sobic006G261400 Sobic003G314700 Sobic003G314700 Sobic007G145400--Sobic003G314700 Sobic001G467100 Sobic001G467100 Sobic007G145400--Sobic001G467100 Sobic007G145400--Sobic008G092800 Sobic006G245900 Sobic006G245900 Sobic007G145400--Sobic006G245900 Sobic010G070600 Sobic010G070600 Sobic003G016500--Sobic010G070600 Sobic003G299500 Sobic003G299500 Sobic003G016500--Sobic003G299500 Sobic003G016500--Sobic008G092800 Sobic008G080500 Sobic008G080500 Sobic003G016500--Sobic008G080500 Sobic003G016500--Sobic002G119600 Sobic007G034200 Sobic007G034200 Sobic003G016500--Sobic007G034200 Sobic003G124600 Sobic003G124600 Sobic003G016500--Sobic003G124600 Sobic004G106250 Sobic004G106250 Sobic003G016500--Sobic004G106250 Sobic008G140700 Sobic008G140700 Sobic003G016500--Sobic008G140700 Sobic002G412700 Sobic002G412700 Sobic001G248100--Sobic002G412700 Sobic010G000800 Sobic010G000800 Sobic001G248100--Sobic010G000800 Sobic001G248100--Sobic007G145400 Sobic005G115500 Sobic005G115500 Sobic001G248100--Sobic005G115500 Sobic001G248100--Sobic010G262100 Sobic001G248100--Sobic006G261400 Sobic002G160700 Sobic002G160700 Sobic001G248100--Sobic002G160700 Sobic004G155600 Sobic004G155600 Sobic001G248100--Sobic004G155600 Sobic001G248100--Sobic003G405500 Sobic001G451300 Sobic001G451300 Sobic010G262100--Sobic001G451300 Sobic010G138900 Sobic010G138900 Sobic010G262100--Sobic010G138900 Sobic010G262100--Sobic001G248100 Sobic010G262100--Sobic008G080500 Sobic002G043100 Sobic002G043100 Sobic010G262100--Sobic002G043100 Sobic002G399800 Sobic002G399800 Sobic010G262100--Sobic002G399800 Sobic010G262100--Sobic002G371600 Sobic010G262100--Sobic003G314700 Sobic010G262100--Sobic008G092800 Sobic001G437400--Sobic002G340900 Sobic001G437400--Sobic003G314700 Sobic003G250900 Sobic003G250900 Sobic001G437400--Sobic003G250900 Sobic009G118900 Sobic009G118900 Sobic001G437400--Sobic009G118900 Sobic003G029600 Sobic003G029600 Sobic001G437400--Sobic003G029600 Sobic001G117800 Sobic001G117800 Sobic001G437400--Sobic001G117800 Sobic003G334700 Sobic003G334700 Sobic001G437400--Sobic003G334700 Sobic001G437400--Sobic008G124800 Sobic007G019300 Sobic007G019300 Sobic001G437400--Sobic007G019300 Sobic007G047600--Sobic002G412700 Sobic007G047600--Sobic007G145400 Sobic007G047600--Sobic008G092800 Sobic004G356200 Sobic004G356200 Sobic007G047600--Sobic004G356200 Sobic003G360300 Sobic003G360300 Sobic007G047600--Sobic003G360300 Sobic007G047600--Sobic008G080500 Sobic006G280100 Sobic006G280100 Sobic007G047600--Sobic006G280100 Sobic007G047600--Sobic002G119600 Sobic007G047600--Sobic001G467100 Sobic008G111600 Sobic008G111600 Sobic006G181800--Sobic008G111600 Sobic004G038100 Sobic004G038100 Sobic006G181800--Sobic004G038100 Sobic002G426100 Sobic002G426100 Sobic006G181800--Sobic002G426100 Sobic006G033101 Sobic006G033101 Sobic006G181800--Sobic006G033101 Sobic006G181800--Sobic002G371600 Sobic002G043000 Sobic002G043000 Sobic006G181800--Sobic002G043000 Sobic006G181800--Sobic008G092800 Sobic006G236000 Sobic006G236000 Sobic006G181800--Sobic006G236000 Sobic010G188000 Sobic010G188000 Sobic006G181800--Sobic010G188000 Sobic001G373800 Sobic001G373800 Sobic002G371600--Sobic001G373800 Sobic006G029100 Sobic006G029100 Sobic002G371600--Sobic006G029100 Sobic002G371600--Sobic006G245900 Sobic002G371600--Sobic004G356200 Sobic003G308500 Sobic003G308500 Sobic002G371600--Sobic003G308500 Sobic002G371600--Sobic002G160700 Sobic003G052800 Sobic003G052800 Sobic002G371600--Sobic003G052800 Sobic002G371600--Sobic001G451300 Sobic002G371600--Sobic010G262100
Octagon: transcription factors


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