Gene annotation
Transcriptome id Sobic.006G237000.1
Synonym Sb06g030380, KASIII
Functional annotation 3-oxoacyl-synthase III, chloroplast precursor, putative, expressed
UniProt C5Y8Z7
Pfam PF08545 PF08541
Panther DB PTHR18919 PTHR18919:SF90
NCBI CDD -
KEGG Orthology K00648; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene Ontology GO:0006633; fatty acid biosynthetic process GO:00043153-oxoacyl-[acyl-carrier-protein] synthase activity GO:0016747transferase activity, transferring acyl groups other than amino-acyl groups GO:0008610lipid biosynthetic process


Orthologs (automatic annotation)
TAIR AT1G62640 : 3-ketoacyl-acyl carrier protein synthase III
RAP-DB (Rice) LOC_Os04g55060.1 : 3-oxoacyl-synthase III, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a057182 , Zm00025a009575 , Zm00025a053922 , Zm00025a053921
Brachypodium PNT61982 , PNT61980 , PNT61981 , KQJ84915
Barley HORVU2Hr1G114920.1 , HORVU2Hr1G114920.3 , HORVU2Hr1G114920.2 , HORVU2Hr1G088050.3 , HORVU2Hr1G088050.2 , HORVU2Hr1G088050.1
Wheat TraesCS2D02G521400 , TraesCS2A02G520200 , TraesCS2A02G520200 , TraesCS2B02G549400
Populus -


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cDNA sequences
Sobic.006G237000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G125800 phosphoglucomutase, putative, expressed -
2 Sobic.005G031000 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed K00225: L-galactono-1,4-lactone dehydrogenase
3 Sobic.001G200200 tetratricopeptide repeat, putative, expressed -
4 Sobic.010G155600 DJ-1 family protein, putative, expressed K03152: protein deglycase
5 Sobic.010G003900 arginine N-methyltransferase 7, putative, expressed K11438: type III protein arginine methyltransferase
6 Sobic.002G155100 bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor, putative, expressed K12524: bifunctional aspartokinase / homoserine dehydrogenase 1
7 Sobic.008G059900 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
8 Sobic.005G098800 CIP111, putative, expressed K14575: AFG2, DRG1, AAA family ATPase
9 Sobic.001G537500 GTP-binding protein, putative, expressed K06944: uncharacterized protein
10 Sobic.001G434700 phosphomevalonate kinase, putative, expressed K00938: E2.7.4.2, phosphomevalonate kinase
11 Sobic.003G165101 - K12876: RBM8A, RNA-binding protein 8A
12 Sobic.010G073500 3-oxoacyl-synthase, putative, expressed K09458: fabF, OXSM, 3-oxoacyl-[acyl-carrier-protein] synthase II
13 Sobic.002G408900 adenyl cyclase, putative, expressed -
14 Sobic.010G188000 elongation factor, putative, expressed K12852: 116 kDa U5 small nuclear ribonucleoprotein component
15 Sobic.010G081700 PPR repeat domain containing protein, putative, expressed -
16 Sobic.004G356200 expressed protein -
17 Sobic.006G193300 nucleolar complex protein, putative, expressed K14771: NOC4, U3 small nucleolar RNA-associated protein 19
18 Sobic.003G309300 radical SAM enzyme, putative, expressed K03644: lipA, LIAS, LIP1, lipoyl synthase
19 Sobic.006G125500 expressed protein -
20 Sobic.001G004200 uncharacterized protein yeiN, putative, expressed K16329: pseudouridylate synthase


Gene co-expression network
sample Sobic006G237000 Sobic006G237000 Sobic002G125800 Sobic002G125800 Sobic006G237000--Sobic002G125800 Sobic005G031000 Sobic005G031000 Sobic006G237000--Sobic005G031000 Sobic001G200200 Sobic001G200200 Sobic006G237000--Sobic001G200200 Sobic010G155600 Sobic010G155600 Sobic006G237000--Sobic010G155600 Sobic010G003900 Sobic010G003900 Sobic006G237000--Sobic010G003900 Sobic002G155100 Sobic002G155100 Sobic006G237000--Sobic002G155100 Sobic008G059900 Sobic008G059900 Sobic006G237000--Sobic008G059900 Sobic005G098800 Sobic005G098800 Sobic006G237000--Sobic005G098800 Sobic001G537500 Sobic001G537500 Sobic006G237000--Sobic001G537500 Sobic002G125800--Sobic005G031000 Sobic002G125800--Sobic006G237000 Sobic001G533100 Sobic001G533100 Sobic002G125800--Sobic001G533100 Sobic002G125800--Sobic001G200200 Sobic001G004200 Sobic001G004200 Sobic002G125800--Sobic001G004200 Sobic004G356200 Sobic004G356200 Sobic002G125800--Sobic004G356200 Sobic010G192600 Sobic010G192600 Sobic002G125800--Sobic010G192600 Sobic003G166500 Sobic003G166500 Sobic002G125800--Sobic003G166500 Sobic004G030400 Sobic004G030400 Sobic002G125800--Sobic004G030400 Sobic005G031000--Sobic004G356200 Sobic005G031000--Sobic001G200200 Sobic005G031000--Sobic008G059900 Sobic005G031000--Sobic002G125800 Sobic001G434700 Sobic001G434700 Sobic005G031000--Sobic001G434700 Sobic005G031000--Sobic006G237000 Sobic005G031000--Sobic001G533100 Sobic004G037200 Sobic004G037200 Sobic005G031000--Sobic004G037200 Sobic005G031000--Sobic010G155600 Sobic001G200200--Sobic004G356200 Sobic001G200200--Sobic005G031000 Sobic002G386900 Sobic002G386900 Sobic001G200200--Sobic002G386900 Sobic002G371600 Sobic002G371600 Sobic001G200200--Sobic002G371600 Sobic001G200200--Sobic004G030400 Sobic006G181800 Sobic006G181800 Sobic001G200200--Sobic006G181800 Sobic006G191200 Sobic006G191200 Sobic001G200200--Sobic006G191200 Sobic006G029100 Sobic006G029100 Sobic001G200200--Sobic006G029100 Sobic001G200200--Sobic002G125800 Sobic010G155600--Sobic006G237000 Sobic010G155600--Sobic005G031000 Sobic008G097600 Sobic008G097600 Sobic010G155600--Sobic008G097600 Sobic010G155600--Sobic002G125800 Sobic010G155600--Sobic001G434700 Sobic004G275600 Sobic004G275600 Sobic010G155600--Sobic004G275600 Sobic010G155600--Sobic001G537500 Sobic010G155600--Sobic004G356200 Sobic010G155600--Sobic004G037200 Sobic006G125500 Sobic006G125500 Sobic010G003900--Sobic006G125500 Sobic010G003900--Sobic006G237000 Sobic004G031300 Sobic004G031300 Sobic010G003900--Sobic004G031300 Sobic010G003900--Sobic005G098800 Sobic006G140400 Sobic006G140400 Sobic010G003900--Sobic006G140400 Sobic010G003900--Sobic001G200200 Sobic001G004100 Sobic001G004100 Sobic010G003900--Sobic001G004100 Sobic009G246500 Sobic009G246500 Sobic010G003900--Sobic009G246500 Sobic005G000300 Sobic005G000300 Sobic010G003900--Sobic005G000300 Sobic006G193500 Sobic006G193500 Sobic002G155100--Sobic006G193500 Sobic002G126800 Sobic002G126800 Sobic002G155100--Sobic002G126800 Sobic003G432300 Sobic003G432300 Sobic002G155100--Sobic003G432300 Sobic002G155100--Sobic006G237000 Sobic003G102700 Sobic003G102700 Sobic002G155100--Sobic003G102700 Sobic005G028100 Sobic005G028100 Sobic002G155100--Sobic005G028100 Sobic001G373000 Sobic001G373000 Sobic002G155100--Sobic001G373000 Sobic001G199500 Sobic001G199500 Sobic002G155100--Sobic001G199500 Sobic001G013300 Sobic001G013300 Sobic002G155100--Sobic001G013300 Sobic010G197200 Sobic010G197200 Sobic008G059900--Sobic010G197200 Sobic008G059900--Sobic005G031000 Sobic008G059900--Sobic001G199500 Sobic004G253500 Sobic004G253500 Sobic008G059900--Sobic004G253500 Sobic010G073500 Sobic010G073500 Sobic008G059900--Sobic010G073500 Sobic008G059900--Sobic003G102700 Sobic006G071628 Sobic006G071628 Sobic008G059900--Sobic006G071628 Sobic008G059900--Sobic006G237000 Sobic003G392100 Sobic003G392100 Sobic008G059900--Sobic003G392100 Sobic003G123200 Sobic003G123200 Sobic005G098800--Sobic003G123200 Sobic008G049100 Sobic008G049100 Sobic005G098800--Sobic008G049100 Sobic010G205900 Sobic010G205900 Sobic005G098800--Sobic010G205900 Sobic005G098800--Sobic009G246500 Sobic008G163500 Sobic008G163500 Sobic005G098800--Sobic008G163500 Sobic002G423400 Sobic002G423400 Sobic005G098800--Sobic002G423400 Sobic005G098800--Sobic005G028100 Sobic010G224700 Sobic010G224700 Sobic005G098800--Sobic010G224700 Sobic004G215900 Sobic004G215900 Sobic005G098800--Sobic004G215900 Sobic006G073200 Sobic006G073200 Sobic001G537500--Sobic006G073200 Sobic004G167200 Sobic004G167200 Sobic001G537500--Sobic004G167200 Sobic006G002800 Sobic006G002800 Sobic001G537500--Sobic006G002800 Sobic001G537500--Sobic004G275600 Sobic004G257100 Sobic004G257100 Sobic001G537500--Sobic004G257100 Sobic007G145400 Sobic007G145400 Sobic001G537500--Sobic007G145400 Sobic005G115500 Sobic005G115500 Sobic001G537500--Sobic005G115500 Sobic001G178300 Sobic001G178300 Sobic001G537500--Sobic001G178300 Sobic002G246700 Sobic002G246700 Sobic001G537500--Sobic002G246700
Octagon: transcription factors


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