Gene annotation
Transcriptome id Sobic.002G155100.1
Synonym AK-HSDHI, Sb02g019450, AK-HSDH
Functional annotation bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor, putative, expressed
UniProt C5X893
Pfam PF01842 PF03447 PF00696 PF00742
Panther DB PTHR21499 PTHR21499:SF30
NCBI CDD KOG0455; Homoserine dehydrogenase
KEGG Orthology K12524; bifunctional aspartokinase / homoserine dehydrogenase 1
Gene Ontology GO:0016597; amino acid binding GO:0008152metabolic process GO:0016491oxidoreductase activity GO:0006520cellular amino acid metabolic process


Orthologs (automatic annotation)
TAIR AT4G19710 : aspartate kinase-homoserine dehydrogenase ii
RAP-DB (Rice) LOC_Os09g12290.1 : bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a030801 , Zm00025a046300 , Zm00025a013666
Brachypodium KQJ96310 , KQJ89735 , KQJ89734
Barley HORVU5Hr1G053950.13 , HORVU5Hr1G053950.12 , HORVU5Hr1G053950.15 , HORVU5Hr1G053950.14 , HORVU5Hr1G053950.16 , HORVU5Hr1G053950.11 , HORVU5Hr1G053950.10 , HORVU5Hr1G053950.1 , HORVU5Hr1G053950.3 , HORVU5Hr1G053950.2 , HORVU5Hr1G053950.5 , HORVU5Hr1G053950.4 , HORVU5Hr1G053950.7 , HORVU5Hr1G053950.6 , HORVU5Hr1G053950.9 , HORVU5Hr1G053950.8
Wheat TraesCS5A02G177400 , TraesCS5A02G177400 , TraesCS5A02G177400 , TraesCS5B02G174600 , TraesCS5D02G181600 , TraesCS5D02G181600 , TraesCS5D02G181600 , TraesCS5D02G181600
Populus -


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cDNA sequences
Sobic.002G155100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G193500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.002G126800 tetratricopeptide repeat domain containing protein, expressed -
3 Sobic.003G432300 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein K14794: ribosomal RNA-processing protein 12
4 Sobic.006G237000 3-oxoacyl-synthase III, chloroplast precursor, putative, expressed K00648: 3-oxoacyl-[acyl-carrier-protein] synthase III
5 Sobic.003G102700 exostosin family protein, putative, expressed -
6 Sobic.005G028100 nucleolar complex protein 2, putative, expressed K14833: nucleolar complex protein 2
7 Sobic.001G373000 nucleoporin interacting component, putative, expressed K14309: NUP93, nuclear pore complex protein Nup93
8 Sobic.001G199500 heat shock protein DnaJ, putative, expressed K09531: DnaJ homolog subfamily C member 11
9 Sobic.001G013300 SWIM zinc finger family protein, putative, expressed -
10 Sobic.001G200200 tetratricopeptide repeat, putative, expressed -
11 Sobic.005G098800 CIP111, putative, expressed K14575: AFG2, DRG1, AAA family ATPase
12 Sobic.002G132600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- K14314: NUP210, nuclear pore complex protein Nup210
13 Sobic.008G059900 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
14 Sobic.002G264300 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
15 Sobic.002G256800 acyl-ACP thioesterase, putative, expressed K10782: fatty acyl-ACP thioesterase A
16 Sobic.007G225700 phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed K01626: E2.5.1.54, aroF, aroG, 3-deoxy-7-phosphoheptulonate synthase
17 Sobic.002G043000 HEN1, putative, expressed -
18 Sobic.001G483800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tubulin--tyrosine ligase-like protein 12, putative, expressed K16609: tubulin--tyrosine ligase-like protein 12
19 Sobic.005G132400 lysosomal alpha-mannosidase precursor, putative, expressed K01191: alpha-mannosidase
20 Sobic.001G004100 WD domain, G-beta repeat domain containing protein, expressed -


Gene co-expression network
sample Sobic002G155100 Sobic002G155100 Sobic006G193500 Sobic006G193500 Sobic002G155100--Sobic006G193500 Sobic002G126800 Sobic002G126800 Sobic002G155100--Sobic002G126800 Sobic003G432300 Sobic003G432300 Sobic002G155100--Sobic003G432300 Sobic006G237000 Sobic006G237000 Sobic002G155100--Sobic006G237000 Sobic003G102700 Sobic003G102700 Sobic002G155100--Sobic003G102700 Sobic005G028100 Sobic005G028100 Sobic002G155100--Sobic005G028100 Sobic001G373000 Sobic001G373000 Sobic002G155100--Sobic001G373000 Sobic001G199500 Sobic001G199500 Sobic002G155100--Sobic001G199500 Sobic001G013300 Sobic001G013300 Sobic002G155100--Sobic001G013300 Sobic006G193500--Sobic002G155100 Sobic008G101900 Sobic008G101900 Sobic006G193500--Sobic008G101900 Sobic006G193500--Sobic001G199500 Sobic006G193500--Sobic003G102700 Sobic010G141600 Sobic010G141600 Sobic006G193500--Sobic010G141600 Sobic003G223000 Sobic003G223000 Sobic006G193500--Sobic003G223000 Sobic005G013300 Sobic005G013300 Sobic006G193500--Sobic005G013300 Sobic006G084300 Sobic006G084300 Sobic006G193500--Sobic006G084300 Sobic001G425700 Sobic001G425700 Sobic006G193500--Sobic001G425700 Sobic002G126800--Sobic003G432300 Sobic002G126800--Sobic005G028100 Sobic002G126800--Sobic001G373000 Sobic009G104900 Sobic009G104900 Sobic002G126800--Sobic009G104900 Sobic002G132600 Sobic002G132600 Sobic002G126800--Sobic002G132600 Sobic002G126800--Sobic002G155100 Sobic006G033101 Sobic006G033101 Sobic002G126800--Sobic006G033101 Sobic007G069700 Sobic007G069700 Sobic002G126800--Sobic007G069700 Sobic005G088900 Sobic005G088900 Sobic002G126800--Sobic005G088900 Sobic003G432300--Sobic002G126800 Sobic003G432300--Sobic005G028100 Sobic003G432300--Sobic005G088900 Sobic003G432300--Sobic002G132600 Sobic003G432300--Sobic001G373000 Sobic003G144000 Sobic003G144000 Sobic003G432300--Sobic003G144000 Sobic008G000600 Sobic008G000600 Sobic003G432300--Sobic008G000600 Sobic002G043000 Sobic002G043000 Sobic003G432300--Sobic002G043000 Sobic004G038100 Sobic004G038100 Sobic003G432300--Sobic004G038100 Sobic002G125800 Sobic002G125800 Sobic006G237000--Sobic002G125800 Sobic005G031000 Sobic005G031000 Sobic006G237000--Sobic005G031000 Sobic001G200200 Sobic001G200200 Sobic006G237000--Sobic001G200200 Sobic010G155600 Sobic010G155600 Sobic006G237000--Sobic010G155600 Sobic010G003900 Sobic010G003900 Sobic006G237000--Sobic010G003900 Sobic006G237000--Sobic002G155100 Sobic008G059900 Sobic008G059900 Sobic006G237000--Sobic008G059900 Sobic005G098800 Sobic005G098800 Sobic006G237000--Sobic005G098800 Sobic001G537500 Sobic001G537500 Sobic006G237000--Sobic001G537500 Sobic003G102700--Sobic001G199500 Sobic005G102800 Sobic005G102800 Sobic003G102700--Sobic005G102800 Sobic003G102700--Sobic006G084300 Sobic002G187600 Sobic002G187600 Sobic003G102700--Sobic002G187600 Sobic002G168000 Sobic002G168000 Sobic003G102700--Sobic002G168000 Sobic006G281900 Sobic006G281900 Sobic003G102700--Sobic006G281900 Sobic003G024000 Sobic003G024000 Sobic003G102700--Sobic003G024000 Sobic009G188900 Sobic009G188900 Sobic003G102700--Sobic009G188900 Sobic002G367200 Sobic002G367200 Sobic003G102700--Sobic002G367200 Sobic004G036700 Sobic004G036700 Sobic005G028100--Sobic004G036700 Sobic008G163500 Sobic008G163500 Sobic005G028100--Sobic008G163500 Sobic006G225400 Sobic006G225400 Sobic005G028100--Sobic006G225400 Sobic010G205900 Sobic010G205900 Sobic005G028100--Sobic010G205900 Sobic003G123200 Sobic003G123200 Sobic005G028100--Sobic003G123200 Sobic005G028100--Sobic003G432300 Sobic005G028100--Sobic002G126800 Sobic005G028100--Sobic001G373000 Sobic005G028100--Sobic002G132600 Sobic001G373000--Sobic009G104900 Sobic001G373000--Sobic004G038100 Sobic002G005000 Sobic002G005000 Sobic001G373000--Sobic002G005000 Sobic003G259600 Sobic003G259600 Sobic001G373000--Sobic003G259600 Sobic003G361400 Sobic003G361400 Sobic001G373000--Sobic003G361400 Sobic010G188000 Sobic010G188000 Sobic001G373000--Sobic010G188000 Sobic001G373000--Sobic002G126800 Sobic001G373000--Sobic001G013300 Sobic001G373000--Sobic005G028100 Sobic001G199500--Sobic005G088900 Sobic001G199500--Sobic003G102700 Sobic001G199500--Sobic006G084300 Sobic001G199500--Sobic003G024000 Sobic001G199500--Sobic006G281900 Sobic001G199500--Sobic009G188900 Sobic007G006800 Sobic007G006800 Sobic001G199500--Sobic007G006800 Sobic006G071628 Sobic006G071628 Sobic001G199500--Sobic006G071628 Sobic001G199500--Sobic003G144000 Sobic004G285000 Sobic004G285000 Sobic001G013300--Sobic004G285000 Sobic001G013300--Sobic001G373000 Sobic008G147200 Sobic008G147200 Sobic001G013300--Sobic008G147200 Sobic001G346900 Sobic001G346900 Sobic001G013300--Sobic001G346900 Sobic001G004100 Sobic001G004100 Sobic001G013300--Sobic001G004100 Sobic010G215900 Sobic010G215900 Sobic001G013300--Sobic010G215900 Sobic003G409200 Sobic003G409200 Sobic001G013300--Sobic003G409200 Sobic007G187600 Sobic007G187600 Sobic001G013300--Sobic007G187600 Sobic001G023800 Sobic001G023800 Sobic001G013300--Sobic001G023800
Octagon: transcription factors


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