Gene annotation
Transcriptome id Sobic.005G132400.1
Synonym Sb05g019600
Functional annotation lysosomal alpha-mannosidase precursor, putative, expressed
UniProt C5Y397
Pfam PF09261 PF01074 PF07748
Panther DB PTHR11607 PTHR11607:SF35
NCBI CDD -
KEGG Orthology K01191; alpha-mannosidase
Gene Ontology GO:0008270; zinc ion binding GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds GO:0005975carbohydrate metabolic process GO:0004559alpha-mannosidase activity GO:0015923mannosidase activity GO:0006013mannose metabolic process


Orthologs (automatic annotation)
TAIR AT5G13980 : Glycosyl hydrolase family 38 protein
RAP-DB (Rice) LOC_Os11g32260.1 : lysosomal alpha-mannosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a015679 , Zm00025a003741
Brachypodium PNT63560 , PNT63561 , KQJ88371 , KQJ88370 , KQJ88372 , KQJ88373
Barley HORVU5Hr1G113880.38 , HORVU5Hr1G113880.34 , HORVU5Hr1G113880.35 , HORVU5Hr1G113880.36 , HORVU5Hr1G113880.37 , HORVU5Hr1G113880.30 , HORVU5Hr1G113880.31 , HORVU5Hr1G113880.32 , HORVU5Hr1G113880.33 , HORVU5Hr1G113880.4 , HORVU5Hr1G113880.5 , HORVU5Hr1G113880.6 , HORVU5Hr1G113880.7 , HORVU5Hr1G113880.1 , HORVU5Hr1G113880.2 , HORVU5Hr1G113880.3 , HORVU5Hr1G113880.8 , HORVU5Hr1G113880.9 , HORVU5Hr1G113880.16 , HORVU5Hr1G113880.17 , HORVU5Hr1G113880.14 , HORVU5Hr1G113880.15 , HORVU5Hr1G113880.12 , HORVU5Hr1G113880.13 , HORVU5Hr1G113880.10 , HORVU5Hr1G113880.11 , HORVU5Hr1G113880.18 , HORVU5Hr1G113880.19 , HORVU5Hr1G113880.29 , HORVU5Hr1G113880.28 , HORVU5Hr1G113880.27 , HORVU5Hr1G113880.26 , HORVU5Hr1G113880.25 , HORVU5Hr1G113880.24 , HORVU5Hr1G113880.23 , HORVU5Hr1G113880.22 , HORVU5Hr1G113880.21 , HORVU5Hr1G113880.20
Wheat TraesCS5B02G496400 , TraesCS5B02G496400 , TraesCS5B02G496400 , TraesCS1B02G106400 , TraesCS5D02G496800 , TraesCS5D02G496800 , TraesCS1D02G088800 , TraesCS2A02G451000 , TraesCS1A02G087500 , TraesCS5A02G483300
Populus -


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cDNA sequences
Sobic.005G132400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G155100 bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor, putative, expressed K12524: bifunctional aspartokinase / homoserine dehydrogenase 1
2 Sobic.004G119400 ATP-binding domain-containing protein, putative, expressed -
3 Sobic.002G079100 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
4 Sobic.004G354000 OsSigP1 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/His catalytic dyad, expressed -
5 Sobic.009G213100 beta-galactosidase 8 precursor, putative, expressed K12309: GLB1, beta-galactosidase
6 Sobic.002G127400 glycosyl hydrolase family 10 protein, putative, expressed -
7 Sobic.007G070000 polyprenyl synthetase, putative, expressed K14066: geranyl diphosphate synthase
8 Sobic.003G267000 1-aminocyclopropane-1-carboxylate deaminase, putative, expressed -
9 Sobic.006G002400 amidase family protein, putative, expressed -
10 Sobic.002G409800 xylose isomerase, putative, expressed K01805: xylose isomerase
11 Sobic.001G027100 FEN1A - Putative flap endonuclease protein, expressed K04799: FEN1, flap endonuclease-1
12 Sobic.008G088842 - -
13 Sobic.005G047300 OsFBT13 - F-box and tubby domain containing protein, expressed -
14 Sobic.005G098800 CIP111, putative, expressed K14575: AFG2, DRG1, AAA family ATPase
15 Sobic.008G186500 FGGY family of carbohydrate kinases, putative, expressed K00854: xylB, xylulokinase
16 Sobic.001G013300 SWIM zinc finger family protein, putative, expressed -
17 Sobic.006G236000 DNA-directed RNA polymerase subunit, putative, expressed K16252: NRPD2, DNA-directed RNA polymerase IV and V subunit 2
18 Sobic.008G017100 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
19 Sobic.001G482200 FAR1 family protein, expressed K17604: zinc finger SWIM domain-containing protein 3
20 Sobic.006G208400 expressed protein K14318: nuclear pore complex protein Nup88


Gene co-expression network
sample Sobic005G132400 Sobic005G132400 Sobic002G155100 Sobic002G155100 Sobic005G132400--Sobic002G155100 Sobic004G119400 Sobic004G119400 Sobic005G132400--Sobic004G119400 Sobic002G079100 Sobic002G079100 Sobic005G132400--Sobic002G079100 Sobic004G354000 Sobic004G354000 Sobic005G132400--Sobic004G354000 Sobic009G213100 Sobic009G213100 Sobic005G132400--Sobic009G213100 Sobic002G127400 Sobic002G127400 Sobic005G132400--Sobic002G127400 Sobic007G070000 Sobic007G070000 Sobic005G132400--Sobic007G070000 Sobic003G267000 Sobic003G267000 Sobic005G132400--Sobic003G267000 Sobic006G002400 Sobic006G002400 Sobic005G132400--Sobic006G002400 Sobic006G193500 Sobic006G193500 Sobic002G155100--Sobic006G193500 Sobic002G126800 Sobic002G126800 Sobic002G155100--Sobic002G126800 Sobic003G432300 Sobic003G432300 Sobic002G155100--Sobic003G432300 Sobic006G237000 Sobic006G237000 Sobic002G155100--Sobic006G237000 Sobic003G102700 Sobic003G102700 Sobic002G155100--Sobic003G102700 Sobic005G028100 Sobic005G028100 Sobic002G155100--Sobic005G028100 Sobic001G373000 Sobic001G373000 Sobic002G155100--Sobic001G373000 Sobic001G199500 Sobic001G199500 Sobic002G155100--Sobic001G199500 Sobic001G013300 Sobic001G013300 Sobic002G155100--Sobic001G013300 Sobic008G017100 Sobic008G017100 Sobic004G119400--Sobic008G017100 Sobic010G224700 Sobic010G224700 Sobic004G119400--Sobic010G224700 Sobic006G269800 Sobic006G269800 Sobic004G119400--Sobic006G269800 Sobic007G094500 Sobic007G094500 Sobic004G119400--Sobic007G094500 Sobic002G380100 Sobic002G380100 Sobic004G119400--Sobic002G380100 Sobic001G429600 Sobic001G429600 Sobic004G119400--Sobic001G429600 Sobic002G309200 Sobic002G309200 Sobic004G119400--Sobic002G309200 Sobic003G070100 Sobic003G070100 Sobic004G119400--Sobic003G070100 Sobic001G540800 Sobic001G540800 Sobic004G119400--Sobic001G540800 Sobic003G124600 Sobic003G124600 Sobic002G079100--Sobic003G124600 Sobic001G448100 Sobic001G448100 Sobic002G079100--Sobic001G448100 Sobic002G079100--Sobic008G017100 Sobic008G080500 Sobic008G080500 Sobic002G079100--Sobic008G080500 Sobic002G079100--Sobic002G380100 Sobic002G292800 Sobic002G292800 Sobic002G079100--Sobic002G292800 Sobic010G278600 Sobic010G278600 Sobic002G079100--Sobic010G278600 Sobic006G245900 Sobic006G245900 Sobic002G079100--Sobic006G245900 Sobic001G482200 Sobic001G482200 Sobic002G079100--Sobic001G482200 Sobic006G208400 Sobic006G208400 Sobic004G354000--Sobic006G208400 Sobic004G342300 Sobic004G342300 Sobic004G354000--Sobic004G342300 Sobic004G354000--Sobic008G017100 Sobic002G356600 Sobic002G356600 Sobic004G354000--Sobic002G356600 Sobic001G322600 Sobic001G322600 Sobic004G354000--Sobic001G322600 Sobic004G354000--Sobic002G079100 Sobic004G356200 Sobic004G356200 Sobic004G354000--Sobic004G356200 Sobic001G027100 Sobic001G027100 Sobic004G354000--Sobic001G027100 Sobic006G236000 Sobic006G236000 Sobic004G354000--Sobic006G236000 Sobic002G409800 Sobic002G409800 Sobic009G213100--Sobic002G409800 Sobic002G076000 Sobic002G076000 Sobic009G213100--Sobic002G076000 Sobic001G507900 Sobic001G507900 Sobic009G213100--Sobic001G507900 Sobic001G017600 Sobic001G017600 Sobic009G213100--Sobic001G017600 Sobic009G062900 Sobic009G062900 Sobic009G213100--Sobic009G062900 Sobic009G213100--Sobic003G070100 Sobic009G213100--Sobic002G079100 Sobic006G215050 Sobic006G215050 Sobic009G213100--Sobic006G215050 Sobic006G217200 Sobic006G217200 Sobic009G213100--Sobic006G217200 Sobic001G338800 Sobic001G338800 Sobic002G127400--Sobic001G338800 Sobic003G294600 Sobic003G294600 Sobic002G127400--Sobic003G294600 Sobic003G435500 Sobic003G435500 Sobic002G127400--Sobic003G435500 Sobic005G216300 Sobic005G216300 Sobic002G127400--Sobic005G216300 Sobic001G335900 Sobic001G335900 Sobic002G127400--Sobic001G335900 Sobic001G518400 Sobic001G518400 Sobic002G127400--Sobic001G518400 Sobic009G142000 Sobic009G142000 Sobic002G127400--Sobic009G142000 Sobic010G138900 Sobic010G138900 Sobic002G127400--Sobic010G138900 Sobic003G314700 Sobic003G314700 Sobic002G127400--Sobic003G314700 Sobic003G311600 Sobic003G311600 Sobic007G070000--Sobic003G311600 Sobic002G340200 Sobic002G340200 Sobic007G070000--Sobic002G340200 Sobic010G134500 Sobic010G134500 Sobic007G070000--Sobic010G134500 Sobic008G088842 Sobic008G088842 Sobic007G070000--Sobic008G088842 Sobic003G223000 Sobic003G223000 Sobic007G070000--Sobic003G223000 Sobic001G300900 Sobic001G300900 Sobic007G070000--Sobic001G300900 Sobic010G091200 Sobic010G091200 Sobic007G070000--Sobic010G091200 Sobic007G070000--Sobic004G354000 Sobic006G275000 Sobic006G275000 Sobic007G070000--Sobic006G275000 Sobic002G141900 Sobic002G141900 Sobic003G267000--Sobic002G141900 Sobic004G144400 Sobic004G144400 Sobic003G267000--Sobic004G144400 Sobic008G186500 Sobic008G186500 Sobic003G267000--Sobic008G186500 Sobic010G157700 Sobic010G157700 Sobic003G267000--Sobic010G157700 Sobic003G345900 Sobic003G345900 Sobic003G267000--Sobic003G345900 Sobic010G120300 Sobic010G120300 Sobic003G267000--Sobic010G120300 Sobic004G275600 Sobic004G275600 Sobic003G267000--Sobic004G275600 Sobic008G038600 Sobic008G038600 Sobic003G267000--Sobic008G038600 Sobic003G267000--Sobic006G208400 Sobic009G096100 Sobic009G096100 Sobic006G002400--Sobic009G096100 Sobic006G002400--Sobic010G278600 Sobic009G055400 Sobic009G055400 Sobic006G002400--Sobic009G055400 Sobic003G083900 Sobic003G083900 Sobic006G002400--Sobic003G083900 Sobic005G199200 Sobic005G199200 Sobic006G002400--Sobic005G199200 Sobic006G002400--Sobic005G132400 Sobic006G002400--Sobic002G141900 Sobic004G128200 Sobic004G128200 Sobic006G002400--Sobic004G128200 Sobic006G056000 Sobic006G056000 Sobic006G002400--Sobic006G056000
Octagon: transcription factors


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