Gene annotation
Transcriptome id Sobic.002G256800.2
Synonym Sb02g029190, FaTA, AtFaTA
Functional annotation acyl-ACP thioesterase, putative, expressed
UniProt A0A1W0W5Q3
Pfam PF01643
Panther DB PTHR31727 PTHR31727:SF6
NCBI CDD -
KEGG Orthology K10782; fatty acyl-ACP thioesterase A
Gene Ontology GO:0016790; thiolester hydrolase activity GO:0006633fatty acid biosynthetic process


Orthologs (automatic annotation)
TAIR AT3G25110 : fatA acyl-ACP thioesterase
RAP-DB (Rice) LOC_Os09g32760.1 : acyl-ACP thioesterase, putative, expressed
MaizeGDB (Corn) Zm00025a014295 , Zm00025a047565
Brachypodium KQJ90908
Barley HORVU5Hr1G076030.2
Wheat TraesCS5B02G283400 , TraesCS5D02G291700 , TraesCS5D02G291700 , TraesCS5A02G284400
Populus -


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cDNA sequences
Sobic.002G256800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G225700 phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed K01626: E2.5.1.54, aroF, aroG, 3-deoxy-7-phosphoheptulonate synthase
2 Sobic.003G336500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KH domain containing protein, putative, expressed K14945: protein quaking
3 Sobic.010G063566 - K11111: TERF2, telomeric repeat-binding factor 2
4 Sobic.002G155100 bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor, putative, expressed K12524: bifunctional aspartokinase / homoserine dehydrogenase 1
5 Sobic.007G092200 aspartate carbamoyltransferase, putative, expressed K00609: pyrB, aspartate carbamoyltransferase catalytic subunit
6 Sobic.008G100400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"SMK1(Ortholog in maize:Li et al., 2014)"(PubMedID : 31659912)@tetratricopeptide-like helical, putative, expressed -
7 Sobic.001G081900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@semialdehyde dehydrogenase, NAD binding domain containing protein, putative, expressed K00133: aspartate-semialdehyde dehydrogenase
8 Sobic.003G408300 WD domain, G-beta repeat domain containing protein, expressed K14791: periodic tryptophan protein 1
9 Sobic.001G199500 heat shock protein DnaJ, putative, expressed K09531: DnaJ homolog subfamily C member 11
10 Sobic.003G102700 exostosin family protein, putative, expressed -
11 Sobic.008G162100 MazG nucleotide pyrophosphohydrolase domain containing protein, expressed K11755: phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase
12 Sobic.004G192500 protein kinase PKN/PRK1, effector, putative, expressed -
13 Sobic.003G223500 WD domain, G-beta repeat domain containing protein, expressed K14299: nucleoporin SEH1
14 Sobic.001G168100 OsFBD13 - F-box and FBD domain containing protein, expressed -
15 Sobic.001G372800 nucleolar protein NOP5-1, putative, expressed K14565: nucleolar protein 58
16 Sobic.010G073500 3-oxoacyl-synthase, putative, expressed K09458: fabF, OXSM, 3-oxoacyl-[acyl-carrier-protein] synthase II
17 Sobic.010G221200 neurochondrin family protein, putative, expressed -
18 Sobic.001G268700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lysosomal alpha-mannosidase precursor, putative, expressed K01191: alpha-mannosidase
19 Sobic.008G173000 transketolase, putative, expressed K00162: PDHB, pyruvate dehydrogenase E1 component beta subunit
20 Sobic.003G322200 membrane-associated salt-inducible protein, putative, expressed -


Gene co-expression network
sample Sobic002G256800 Sobic002G256800 Sobic007G225700 Sobic007G225700 Sobic002G256800--Sobic007G225700 Sobic003G336500 Sobic003G336500 Sobic002G256800--Sobic003G336500 Sobic010G063566 Sobic010G063566 Sobic002G256800--Sobic010G063566 Sobic002G155100 Sobic002G155100 Sobic002G256800--Sobic002G155100 Sobic007G092200 Sobic007G092200 Sobic002G256800--Sobic007G092200 Sobic008G100400 Sobic008G100400 Sobic002G256800--Sobic008G100400 Sobic001G081900 Sobic001G081900 Sobic002G256800--Sobic001G081900 Sobic003G408300 Sobic003G408300 Sobic002G256800--Sobic003G408300 Sobic001G199500 Sobic001G199500 Sobic002G256800--Sobic001G199500 Sobic007G225700--Sobic002G256800 Sobic007G225700--Sobic002G155100 Sobic005G102800 Sobic005G102800 Sobic007G225700--Sobic005G102800 Sobic010G155600 Sobic010G155600 Sobic007G225700--Sobic010G155600 Sobic006G193500 Sobic006G193500 Sobic007G225700--Sobic006G193500 Sobic003G102700 Sobic003G102700 Sobic007G225700--Sobic003G102700 Sobic003G223000 Sobic003G223000 Sobic007G225700--Sobic003G223000 Sobic006G237000 Sobic006G237000 Sobic007G225700--Sobic006G237000 Sobic007G225700--Sobic008G100400 Sobic008G068100 Sobic008G068100 Sobic003G336500--Sobic008G068100 Sobic001G040600 Sobic001G040600 Sobic003G336500--Sobic001G040600 Sobic009G191500 Sobic009G191500 Sobic003G336500--Sobic009G191500 Sobic007G060600 Sobic007G060600 Sobic003G336500--Sobic007G060600 Sobic003G336500--Sobic001G199500 Sobic001G483800 Sobic001G483800 Sobic003G336500--Sobic001G483800 Sobic005G088900 Sobic005G088900 Sobic003G336500--Sobic005G088900 Sobic009G176300 Sobic009G176300 Sobic003G336500--Sobic009G176300 Sobic003G336500--Sobic008G100400 Sobic002G177500 Sobic002G177500 Sobic010G063566--Sobic002G177500 Sobic010G063566--Sobic002G256800 Sobic001G268700 Sobic001G268700 Sobic010G063566--Sobic001G268700 Sobic006G111200 Sobic006G111200 Sobic010G063566--Sobic006G111200 Sobic001G453500 Sobic001G453500 Sobic010G063566--Sobic001G453500 Sobic002G339800 Sobic002G339800 Sobic010G063566--Sobic002G339800 Sobic001G168100 Sobic001G168100 Sobic010G063566--Sobic001G168100 Sobic002G223300 Sobic002G223300 Sobic010G063566--Sobic002G223300 Sobic003G223500 Sobic003G223500 Sobic010G063566--Sobic003G223500 Sobic002G155100--Sobic006G193500 Sobic002G126800 Sobic002G126800 Sobic002G155100--Sobic002G126800 Sobic003G432300 Sobic003G432300 Sobic002G155100--Sobic003G432300 Sobic002G155100--Sobic006G237000 Sobic002G155100--Sobic003G102700 Sobic005G028100 Sobic005G028100 Sobic002G155100--Sobic005G028100 Sobic001G373000 Sobic001G373000 Sobic002G155100--Sobic001G373000 Sobic002G155100--Sobic001G199500 Sobic001G013300 Sobic001G013300 Sobic002G155100--Sobic001G013300 Sobic009G071700 Sobic009G071700 Sobic007G092200--Sobic009G071700 Sobic007G092200--Sobic009G191500 Sobic006G225400 Sobic006G225400 Sobic007G092200--Sobic006G225400 Sobic007G092200--Sobic003G336500 Sobic007G137350 Sobic007G137350 Sobic007G092200--Sobic007G137350 Sobic001G457200 Sobic001G457200 Sobic007G092200--Sobic001G457200 Sobic007G092200--Sobic005G088900 Sobic005G079201 Sobic005G079201 Sobic007G092200--Sobic005G079201 Sobic001G372800 Sobic001G372800 Sobic007G092200--Sobic001G372800 Sobic007G182600 Sobic007G182600 Sobic008G100400--Sobic007G182600 Sobic008G100400--Sobic001G040600 Sobic008G100400--Sobic003G336500 Sobic010G157700 Sobic010G157700 Sobic008G100400--Sobic010G157700 Sobic008G147400 Sobic008G147400 Sobic008G100400--Sobic008G147400 Sobic009G096100 Sobic009G096100 Sobic008G100400--Sobic009G096100 Sobic001G081300 Sobic001G081300 Sobic008G100400--Sobic001G081300 Sobic010G099300 Sobic010G099300 Sobic008G100400--Sobic010G099300 Sobic009G148200 Sobic009G148200 Sobic008G100400--Sobic009G148200 Sobic001G371100 Sobic001G371100 Sobic001G081900--Sobic001G371100 Sobic001G397000 Sobic001G397000 Sobic001G081900--Sobic001G397000 Sobic010G125100 Sobic010G125100 Sobic001G081900--Sobic010G125100 Sobic007G079600 Sobic007G079600 Sobic001G081900--Sobic007G079600 Sobic010G144900 Sobic010G144900 Sobic001G081900--Sobic010G144900 Sobic002G101000 Sobic002G101000 Sobic001G081900--Sobic002G101000 Sobic002G304400 Sobic002G304400 Sobic001G081900--Sobic002G304400 Sobic007G171200 Sobic007G171200 Sobic001G081900--Sobic007G171200 Sobic010G032700 Sobic010G032700 Sobic001G081900--Sobic010G032700 Sobic008G016100 Sobic008G016100 Sobic003G408300--Sobic008G016100 Sobic002G263200 Sobic002G263200 Sobic003G408300--Sobic002G263200 Sobic007G187900 Sobic007G187900 Sobic003G408300--Sobic007G187900 Sobic002G116500 Sobic002G116500 Sobic003G408300--Sobic002G116500 Sobic003G408300--Sobic001G168100 Sobic006G084000 Sobic006G084000 Sobic003G408300--Sobic006G084000 Sobic002G332200 Sobic002G332200 Sobic003G408300--Sobic002G332200 Sobic006G251500 Sobic006G251500 Sobic003G408300--Sobic006G251500 Sobic009G143800 Sobic009G143800 Sobic003G408300--Sobic009G143800 Sobic001G199500--Sobic005G088900 Sobic001G199500--Sobic003G102700 Sobic006G084300 Sobic006G084300 Sobic001G199500--Sobic006G084300 Sobic003G024000 Sobic003G024000 Sobic001G199500--Sobic003G024000 Sobic006G281900 Sobic006G281900 Sobic001G199500--Sobic006G281900 Sobic009G188900 Sobic009G188900 Sobic001G199500--Sobic009G188900 Sobic007G006800 Sobic007G006800 Sobic001G199500--Sobic007G006800 Sobic006G071628 Sobic006G071628 Sobic001G199500--Sobic006G071628 Sobic003G144000 Sobic003G144000 Sobic001G199500--Sobic003G144000
Octagon: transcription factors


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