Gene annotation
Transcriptome id Sobic.004G192500.5,Sobic.004G192500.7,Sobic.004G192500.2,Sobic.004G192500.3,Sobic.004G192500.6,Sobic.004G192500.8
Synonym Sb04g024050
Functional annotation protein kinase PKN/PRK1, effector, putative, expressed
UniProt A0A1Z5RND4 , A0A1Z5RNP2 , A0A194YQN0 , A0A194YQN1
Pfam -
Panther DB PTHR33405:SF3 PTHR33405 PTHR33405 PTHR33405:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G55170 : -
RAP-DB (Rice) LOC_Os08g33330.1 : protein kinase PKN/PRK1, effector, putative, expressed
MaizeGDB (Corn) Zm00025a020831 , Zm00025a005844
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G175000 expressed protein -
2 Sobic.009G188900 acyltransferase, putative, expressed K13513: LCLAT1, lysocardiolipin and lysophospholipid acyltransferase
3 Sobic.003G336500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KH domain containing protein, putative, expressed K14945: protein quaking
4 Sobic.008G068100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tRNA pseudouridine synthase family protein, putative, expressed K06173: truA, tRNA pseudouridine38-40 synthase
5 Sobic.009G191500 pseudouridylate synthase, putative, expressed K06176: truD, tRNA pseudouridine13 synthase
6 Sobic.005G079201 - -
7 Sobic.006G281900 down-regulated TF in developmental senescence(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
8 Sobic.002G168000 expressed protein -
9 Sobic.001G199500 heat shock protein DnaJ, putative, expressed K09531: DnaJ homolog subfamily C member 11
10 Sobic.008G123200 AAA-type ATPase family protein, putative, expressed -
11 Sobic.001G264201 - -
12 Sobic.003G102700 exostosin family protein, putative, expressed -
13 Sobic.010G257000 two-component response regulator, putative, expressed -
14 Sobic.008G090000 oxysterol-binding protein, putative, expressed -
15 Sobic.005G138000 zinc knuckle domain containing protein, expressed -
16 Sobic.001G483800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tubulin--tyrosine ligase-like protein 12, putative, expressed K16609: tubulin--tyrosine ligase-like protein 12
17 Sobic.002G127900 ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
18 Sobic.005G102800 OsSCP48 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
19 Sobic.006G202000 COBW domain containing protein, putative, expressed -
20 Sobic.007G050800 abhydrolase domain-containing protein FAM108C1, putative, expressed -


Gene co-expression network
sample Sobic004G192500 Sobic004G192500 Sobic010G175000 Sobic010G175000 Sobic004G192500--Sobic010G175000 Sobic009G188900 Sobic009G188900 Sobic004G192500--Sobic009G188900 Sobic003G336500 Sobic003G336500 Sobic004G192500--Sobic003G336500 Sobic008G068100 Sobic008G068100 Sobic004G192500--Sobic008G068100 Sobic009G191500 Sobic009G191500 Sobic004G192500--Sobic009G191500 Sobic005G079201 Sobic005G079201 Sobic004G192500--Sobic005G079201 Sobic006G281900 Sobic006G281900 Sobic004G192500--Sobic006G281900 Sobic002G168000 Sobic002G168000 Sobic004G192500--Sobic002G168000 Sobic001G199500 Sobic001G199500 Sobic004G192500--Sobic001G199500 Sobic010G175000--Sobic004G192500 Sobic010G257000 Sobic010G257000 Sobic010G175000--Sobic010G257000 Sobic006G226000 Sobic006G226000 Sobic010G175000--Sobic006G226000 Sobic010G175000--Sobic009G188900 Sobic010G175000--Sobic006G281900 Sobic006G275500 Sobic006G275500 Sobic010G175000--Sobic006G275500 Sobic006G016700 Sobic006G016700 Sobic010G175000--Sobic006G016700 Sobic010G175000--Sobic002G168000 Sobic002G055800 Sobic002G055800 Sobic010G175000--Sobic002G055800 Sobic009G188900--Sobic002G168000 Sobic010G250400 Sobic010G250400 Sobic009G188900--Sobic010G250400 Sobic009G188900--Sobic006G281900 Sobic009G188900--Sobic001G199500 Sobic009G188900--Sobic006G275500 Sobic001G425700 Sobic001G425700 Sobic009G188900--Sobic001G425700 Sobic001G290500 Sobic001G290500 Sobic009G188900--Sobic001G290500 Sobic005G153000 Sobic005G153000 Sobic009G188900--Sobic005G153000 Sobic007G187700 Sobic007G187700 Sobic009G188900--Sobic007G187700 Sobic003G336500--Sobic008G068100 Sobic001G040600 Sobic001G040600 Sobic003G336500--Sobic001G040600 Sobic003G336500--Sobic009G191500 Sobic007G060600 Sobic007G060600 Sobic003G336500--Sobic007G060600 Sobic003G336500--Sobic001G199500 Sobic001G483800 Sobic001G483800 Sobic003G336500--Sobic001G483800 Sobic005G088900 Sobic005G088900 Sobic003G336500--Sobic005G088900 Sobic009G176300 Sobic009G176300 Sobic003G336500--Sobic009G176300 Sobic008G100400 Sobic008G100400 Sobic003G336500--Sobic008G100400 Sobic008G068100--Sobic009G191500 Sobic004G215900 Sobic004G215900 Sobic008G068100--Sobic004G215900 Sobic008G068100--Sobic005G079201 Sobic006G236000 Sobic006G236000 Sobic008G068100--Sobic006G236000 Sobic002G003300 Sobic002G003300 Sobic008G068100--Sobic002G003300 Sobic008G068100--Sobic001G483800 Sobic008G068100--Sobic005G088900 Sobic008G068100--Sobic003G336500 Sobic001G024000 Sobic001G024000 Sobic008G068100--Sobic001G024000 Sobic009G191500--Sobic008G068100 Sobic009G191500--Sobic004G215900 Sobic009G191500--Sobic001G483800 Sobic009G191500--Sobic005G079201 Sobic009G191500--Sobic005G088900 Sobic009G191500--Sobic002G003300 Sobic010G153300 Sobic010G153300 Sobic009G191500--Sobic010G153300 Sobic009G191500--Sobic007G060600 Sobic009G191500--Sobic003G336500 Sobic005G079201--Sobic008G068100 Sobic005G079201--Sobic009G191500 Sobic005G079201--Sobic004G215900 Sobic005G079201--Sobic006G236000 Sobic005G079201--Sobic005G088900 Sobic008G090000 Sobic008G090000 Sobic005G079201--Sobic008G090000 Sobic002G043000 Sobic002G043000 Sobic005G079201--Sobic002G043000 Sobic005G079201--Sobic002G003300 Sobic001G408300 Sobic001G408300 Sobic005G079201--Sobic001G408300 Sobic006G281900--Sobic002G168000 Sobic002G021200 Sobic002G021200 Sobic006G281900--Sobic002G021200 Sobic006G281900--Sobic009G188900 Sobic006G281900--Sobic001G290500 Sobic006G281900--Sobic001G199500 Sobic006G281900--Sobic001G425700 Sobic009G225500 Sobic009G225500 Sobic006G281900--Sobic009G225500 Sobic006G281900--Sobic007G187700 Sobic003G024000 Sobic003G024000 Sobic006G281900--Sobic003G024000 Sobic002G168000--Sobic007G187700 Sobic002G168000--Sobic005G153000 Sobic002G168000--Sobic002G021200 Sobic002G168000--Sobic006G281900 Sobic002G168000--Sobic006G275500 Sobic002G168000--Sobic009G188900 Sobic009G077300 Sobic009G077300 Sobic002G168000--Sobic009G077300 Sobic002G168000--Sobic006G016700 Sobic001G104500 Sobic001G104500 Sobic002G168000--Sobic001G104500 Sobic001G199500--Sobic005G088900 Sobic003G102700 Sobic003G102700 Sobic001G199500--Sobic003G102700 Sobic006G084300 Sobic006G084300 Sobic001G199500--Sobic006G084300 Sobic001G199500--Sobic003G024000 Sobic001G199500--Sobic006G281900 Sobic001G199500--Sobic009G188900 Sobic007G006800 Sobic007G006800 Sobic001G199500--Sobic007G006800 Sobic006G071628 Sobic006G071628 Sobic001G199500--Sobic006G071628 Sobic003G144000 Sobic003G144000 Sobic001G199500--Sobic003G144000
Octagon: transcription factors


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