Gene annotation
Transcriptome id Sobic.005G079201.1
Synonym -
Functional annotation -
UniProt A0A1Z5RHW3
Pfam -
Panther DB PTHR32212 PTHR32212:SF100
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G14103 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os11g09970.1 : OsFBX411 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G068100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tRNA pseudouridine synthase family protein, putative, expressed K06173: truA, tRNA pseudouridine38-40 synthase
2 Sobic.009G191500 pseudouridylate synthase, putative, expressed K06176: truD, tRNA pseudouridine13 synthase
3 Sobic.004G215900 S1 RNA binding domain containing protein, expressed K00962: pnp, polyribonucleotide nucleotidyltransferase
4 Sobic.006G236000 DNA-directed RNA polymerase subunit, putative, expressed K16252: NRPD2, DNA-directed RNA polymerase IV and V subunit 2
5 Sobic.005G088900 AGAP007117-PA, putative, expressed -
6 Sobic.008G090000 oxysterol-binding protein, putative, expressed -
7 Sobic.002G043000 HEN1, putative, expressed -
8 Sobic.002G003300 - K10884: XRCC6, KU70, ATP-dependent DNA helicase 2 subunit 1
9 Sobic.001G408300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.001G483800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tubulin--tyrosine ligase-like protein 12, putative, expressed K16609: tubulin--tyrosine ligase-like protein 12
11 Sobic.009G010300 pumilio-family RNA binding protein, putative, expressed K17943: pumilio RNA-binding family
12 Sobic.001G199500 heat shock protein DnaJ, putative, expressed K09531: DnaJ homolog subfamily C member 11
13 Sobic.003G336500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KH domain containing protein, putative, expressed K14945: protein quaking
14 Sobic.010G038800 NAP domain containing protein, putative, expressed K11279: NAP1L1, nucleosome assembly protein 1-like 1
15 Sobic.002G132600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- K14314: NUP210, nuclear pore complex protein Nup210
16 Sobic.004G192500 protein kinase PKN/PRK1, effector, putative, expressed -
17 Sobic.002G126800 tetratricopeptide repeat domain containing protein, expressed -
18 Sobic.003G432300 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein K14794: ribosomal RNA-processing protein 12
19 Sobic.010G175000 expressed protein -
20 Sobic.009G188900 acyltransferase, putative, expressed K13513: LCLAT1, lysocardiolipin and lysophospholipid acyltransferase


Gene co-expression network
sample Sobic005G079201 Sobic005G079201 Sobic008G068100 Sobic008G068100 Sobic005G079201--Sobic008G068100 Sobic009G191500 Sobic009G191500 Sobic005G079201--Sobic009G191500 Sobic004G215900 Sobic004G215900 Sobic005G079201--Sobic004G215900 Sobic006G236000 Sobic006G236000 Sobic005G079201--Sobic006G236000 Sobic005G088900 Sobic005G088900 Sobic005G079201--Sobic005G088900 Sobic008G090000 Sobic008G090000 Sobic005G079201--Sobic008G090000 Sobic002G043000 Sobic002G043000 Sobic005G079201--Sobic002G043000 Sobic002G003300 Sobic002G003300 Sobic005G079201--Sobic002G003300 Sobic001G408300 Sobic001G408300 Sobic005G079201--Sobic001G408300 Sobic008G068100--Sobic009G191500 Sobic008G068100--Sobic004G215900 Sobic008G068100--Sobic005G079201 Sobic008G068100--Sobic006G236000 Sobic008G068100--Sobic002G003300 Sobic001G483800 Sobic001G483800 Sobic008G068100--Sobic001G483800 Sobic008G068100--Sobic005G088900 Sobic003G336500 Sobic003G336500 Sobic008G068100--Sobic003G336500 Sobic001G024000 Sobic001G024000 Sobic008G068100--Sobic001G024000 Sobic009G191500--Sobic008G068100 Sobic009G191500--Sobic004G215900 Sobic009G191500--Sobic001G483800 Sobic009G191500--Sobic005G079201 Sobic009G191500--Sobic005G088900 Sobic009G191500--Sobic002G003300 Sobic010G153300 Sobic010G153300 Sobic009G191500--Sobic010G153300 Sobic007G060600 Sobic007G060600 Sobic009G191500--Sobic007G060600 Sobic009G191500--Sobic003G336500 Sobic004G215900--Sobic008G068100 Sobic004G215900--Sobic006G236000 Sobic004G215900--Sobic009G191500 Sobic004G215900--Sobic002G003300 Sobic004G215900--Sobic001G024000 Sobic008G111600 Sobic008G111600 Sobic004G215900--Sobic008G111600 Sobic004G038100 Sobic004G038100 Sobic004G215900--Sobic004G038100 Sobic002G112600 Sobic002G112600 Sobic004G215900--Sobic002G112600 Sobic004G215900--Sobic002G043000 Sobic006G236000--Sobic004G215900 Sobic006G236000--Sobic008G068100 Sobic003G123100 Sobic003G123100 Sobic006G236000--Sobic003G123100 Sobic006G236000--Sobic002G043000 Sobic006G112700 Sobic006G112700 Sobic006G236000--Sobic006G112700 Sobic006G181800 Sobic006G181800 Sobic006G236000--Sobic006G181800 Sobic006G236000--Sobic009G191500 Sobic006G236000--Sobic002G003300 Sobic006G236000--Sobic008G111600 Sobic001G199500 Sobic001G199500 Sobic005G088900--Sobic001G199500 Sobic005G088900--Sobic009G191500 Sobic009G176300 Sobic009G176300 Sobic005G088900--Sobic009G176300 Sobic005G088900--Sobic004G215900 Sobic005G088900--Sobic008G068100 Sobic003G432300 Sobic003G432300 Sobic005G088900--Sobic003G432300 Sobic003G144000 Sobic003G144000 Sobic005G088900--Sobic003G144000 Sobic002G133000 Sobic002G133000 Sobic005G088900--Sobic002G133000 Sobic005G088900--Sobic002G003300 Sobic006G275500 Sobic006G275500 Sobic008G090000--Sobic006G275500 Sobic003G147500 Sobic003G147500 Sobic008G090000--Sobic003G147500 Sobic006G084300 Sobic006G084300 Sobic008G090000--Sobic006G084300 Sobic006G016700 Sobic006G016700 Sobic008G090000--Sobic006G016700 Sobic008G083500 Sobic008G083500 Sobic008G090000--Sobic008G083500 Sobic009G146250 Sobic009G146250 Sobic008G090000--Sobic009G146250 Sobic002G168000 Sobic002G168000 Sobic008G090000--Sobic002G168000 Sobic009G188900 Sobic009G188900 Sobic008G090000--Sobic009G188900 Sobic002G362200 Sobic002G362200 Sobic008G090000--Sobic002G362200 Sobic002G043000--Sobic008G111600 Sobic002G043000--Sobic004G215900 Sobic002G426100 Sobic002G426100 Sobic002G043000--Sobic002G426100 Sobic002G043000--Sobic006G236000 Sobic002G043000--Sobic008G068100 Sobic002G043000--Sobic006G181800 Sobic002G043000--Sobic004G038100 Sobic006G280100 Sobic006G280100 Sobic002G043000--Sobic006G280100 Sobic004G129500 Sobic004G129500 Sobic002G043000--Sobic004G129500 Sobic002G003300--Sobic004G215900 Sobic002G003300--Sobic009G191500 Sobic002G003300--Sobic008G068100 Sobic002G003300--Sobic008G111600 Sobic002G003300--Sobic005G088900 Sobic002G003300--Sobic006G236000 Sobic002G003300--Sobic002G043000 Sobic002G003300--Sobic001G024000 Sobic002G003300--Sobic006G181800 Sobic007G006800 Sobic007G006800 Sobic001G408300--Sobic007G006800 Sobic010G250800 Sobic010G250800 Sobic001G408300--Sobic010G250800 Sobic010G065800 Sobic010G065800 Sobic001G408300--Sobic010G065800 Sobic010G038800 Sobic010G038800 Sobic001G408300--Sobic010G038800 Sobic001G061800 Sobic001G061800 Sobic001G408300--Sobic001G061800 Sobic006G208400 Sobic006G208400 Sobic001G408300--Sobic006G208400 Sobic001G408300--Sobic005G088900 Sobic009G010300 Sobic009G010300 Sobic001G408300--Sobic009G010300 Sobic010G252700 Sobic010G252700 Sobic001G408300--Sobic010G252700
Octagon: transcription factors


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