Gene annotation
Transcriptome id Sobic.010G063566.1
Synonym -
Functional annotation -
UniProt A0A1W0VRT5
Pfam PF01266 PF00249
Panther DB PTHR13847:SF184 PTHR13847
NCBI CDD -
KEGG Orthology K11111; TERF2, telomeric repeat-binding factor 2
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT2G22650 : FAD-dependent oxidoreductase family protein
RAP-DB (Rice) LOC_Os06g08290.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a041691 , Zm00025a015410 , Zm00025a041082 , Zm00025a049800
Brachypodium KQK19305 , PNT76377
Barley -
Wheat TraesCS7B02G047400 , TraesCS7A02G145200 , TraesCS7D02G146500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G177500 expressed protein -
2 Sobic.002G256800 acyl-ACP thioesterase, putative, expressed K10782: fatty acyl-ACP thioesterase A
3 Sobic.001G268700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lysosomal alpha-mannosidase precursor, putative, expressed K01191: alpha-mannosidase
4 Sobic.006G111200 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
5 Sobic.001G453500 expressed protein -
6 Sobic.002G339800 B3 DNA binding domain containing protein, putative, expressed -
7 Sobic.001G168100 OsFBD13 - F-box and FBD domain containing protein, expressed -
8 Sobic.002G223300 nucleoporin p58/p45, putative, expressed K14307: NUPL1, nucleoporin p58/p45
9 Sobic.003G223500 WD domain, G-beta repeat domain containing protein, expressed K14299: nucleoporin SEH1
10 Sobic.001G013300 SWIM zinc finger family protein, putative, expressed -
11 Sobic.003G336500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KH domain containing protein, putative, expressed K14945: protein quaking
12 Sobic.003G436600 expressed protein -
13 Sobic.004G027400 - -
14 Sobic.001G264201 - -
15 Sobic.005G028100 nucleolar complex protein 2, putative, expressed K14833: nucleolar complex protein 2
16 Sobic.001G061800 RFC3 - Putative clamp loader of PCNA, replication factor C subunit 3, expressed K10756: replication factor C subunit 3/5
17 Sobic.009G045300 OsFBL21 - F-box domain and LRR containing protein, expressed K14485: transport inhibitor response 1
18 Sobic.003G408300 WD domain, G-beta repeat domain containing protein, expressed K14791: periodic tryptophan protein 1
19 Sobic.003G002700 WD domain, G-beta repeat domain containing protein, expressed K11806: DCAF13, DDB1- and CUL4-associated factor 13
20 Sobic.002G003300 - K10884: XRCC6, KU70, ATP-dependent DNA helicase 2 subunit 1


Gene co-expression network
sample Sobic010G063566 Sobic010G063566 Sobic002G177500 Sobic002G177500 Sobic010G063566--Sobic002G177500 Sobic002G256800 Sobic002G256800 Sobic010G063566--Sobic002G256800 Sobic001G268700 Sobic001G268700 Sobic010G063566--Sobic001G268700 Sobic006G111200 Sobic006G111200 Sobic010G063566--Sobic006G111200 Sobic001G453500 Sobic001G453500 Sobic010G063566--Sobic001G453500 Sobic002G339800 Sobic002G339800 Sobic010G063566--Sobic002G339800 Sobic001G168100 Sobic001G168100 Sobic010G063566--Sobic001G168100 Sobic002G223300 Sobic002G223300 Sobic010G063566--Sobic002G223300 Sobic003G223500 Sobic003G223500 Sobic010G063566--Sobic003G223500 Sobic001G370300 Sobic001G370300 Sobic002G177500--Sobic001G370300 Sobic004G285000 Sobic004G285000 Sobic002G177500--Sobic004G285000 Sobic002G177500--Sobic001G168100 Sobic003G436600 Sobic003G436600 Sobic002G177500--Sobic003G436600 Sobic001G013300 Sobic001G013300 Sobic002G177500--Sobic001G013300 Sobic002G177500--Sobic002G223300 Sobic002G399200 Sobic002G399200 Sobic002G177500--Sobic002G399200 Sobic006G226300 Sobic006G226300 Sobic002G177500--Sobic006G226300 Sobic009G151200 Sobic009G151200 Sobic002G177500--Sobic009G151200 Sobic007G225700 Sobic007G225700 Sobic002G256800--Sobic007G225700 Sobic003G336500 Sobic003G336500 Sobic002G256800--Sobic003G336500 Sobic002G256800--Sobic010G063566 Sobic002G155100 Sobic002G155100 Sobic002G256800--Sobic002G155100 Sobic007G092200 Sobic007G092200 Sobic002G256800--Sobic007G092200 Sobic008G100400 Sobic008G100400 Sobic002G256800--Sobic008G100400 Sobic001G081900 Sobic001G081900 Sobic002G256800--Sobic001G081900 Sobic003G408300 Sobic003G408300 Sobic002G256800--Sobic003G408300 Sobic001G199500 Sobic001G199500 Sobic002G256800--Sobic001G199500 Sobic002G050500 Sobic002G050500 Sobic001G268700--Sobic002G050500 Sobic010G221200 Sobic010G221200 Sobic001G268700--Sobic010G221200 Sobic005G120600 Sobic005G120600 Sobic001G268700--Sobic005G120600 Sobic004G116500 Sobic004G116500 Sobic001G268700--Sobic004G116500 Sobic003G107900 Sobic003G107900 Sobic001G268700--Sobic003G107900 Sobic001G268700--Sobic002G223300 Sobic001G372900 Sobic001G372900 Sobic001G268700--Sobic001G372900 Sobic001G268700--Sobic010G063566 Sobic001G268700--Sobic008G100400 Sobic006G111200--Sobic001G453500 Sobic004G151000 Sobic004G151000 Sobic006G111200--Sobic004G151000 Sobic001G368300 Sobic001G368300 Sobic006G111200--Sobic001G368300 Sobic007G060600 Sobic007G060600 Sobic006G111200--Sobic007G060600 Sobic001G049800 Sobic001G049800 Sobic006G111200--Sobic001G049800 Sobic006G271900 Sobic006G271900 Sobic006G111200--Sobic006G271900 Sobic002G380100 Sobic002G380100 Sobic006G111200--Sobic002G380100 Sobic006G059500 Sobic006G059500 Sobic006G111200--Sobic006G059500 Sobic007G059700 Sobic007G059700 Sobic006G111200--Sobic007G059700 Sobic001G453500--Sobic006G111200 Sobic001G453500--Sobic001G368300 Sobic001G453500--Sobic004G151000 Sobic006G140400 Sobic006G140400 Sobic001G453500--Sobic006G140400 Sobic004G027400 Sobic004G027400 Sobic001G453500--Sobic004G027400 Sobic004G027300 Sobic004G027300 Sobic001G453500--Sobic004G027300 Sobic001G453500--Sobic001G049800 Sobic002G112600 Sobic002G112600 Sobic001G453500--Sobic002G112600 Sobic009G105400 Sobic009G105400 Sobic001G453500--Sobic009G105400 Sobic002G339800--Sobic002G223300 Sobic002G339800--Sobic002G177500 Sobic002G017900 Sobic002G017900 Sobic002G339800--Sobic002G017900 Sobic002G263200 Sobic002G263200 Sobic002G339800--Sobic002G263200 Sobic009G045300 Sobic009G045300 Sobic002G339800--Sobic009G045300 Sobic002G339800--Sobic001G013300 Sobic002G339800--Sobic004G285000 Sobic002G339800--Sobic001G168100 Sobic002G339800--Sobic010G063566 Sobic001G168100--Sobic002G177500 Sobic001G168100--Sobic001G013300 Sobic001G168100--Sobic004G285000 Sobic001G168100--Sobic002G223300 Sobic001G168100--Sobic003G223500 Sobic007G043400 Sobic007G043400 Sobic001G168100--Sobic007G043400 Sobic001G168100--Sobic003G408300 Sobic001G168100--Sobic002G339800 Sobic001G023800 Sobic001G023800 Sobic001G168100--Sobic001G023800 Sobic002G334600 Sobic002G334600 Sobic002G223300--Sobic002G334600 Sobic004G085300 Sobic004G085300 Sobic002G223300--Sobic004G085300 Sobic002G223300--Sobic009G151200 Sobic003G132700 Sobic003G132700 Sobic002G223300--Sobic003G132700 Sobic007G046900 Sobic007G046900 Sobic002G223300--Sobic007G046900 Sobic002G223300--Sobic004G285000 Sobic006G210200 Sobic006G210200 Sobic002G223300--Sobic006G210200 Sobic002G223300--Sobic002G050500 Sobic002G223300--Sobic002G339800 Sobic001G061800 Sobic001G061800 Sobic003G223500--Sobic001G061800 Sobic005G178700 Sobic005G178700 Sobic003G223500--Sobic005G178700 Sobic004G011000 Sobic004G011000 Sobic003G223500--Sobic004G011000 Sobic001G226000 Sobic001G226000 Sobic003G223500--Sobic001G226000 Sobic003G223500--Sobic001G168100 Sobic003G223500--Sobic002G334600 Sobic003G223500--Sobic007G043400 Sobic007G053400 Sobic007G053400 Sobic003G223500--Sobic007G053400 Sobic002G218700 Sobic002G218700 Sobic003G223500--Sobic002G218700
Octagon: transcription factors


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