Gene annotation
Transcriptome id Sobic.008G162100.1,Sobic.008G162100.2
Synonym Sb08g020870, HISN2, AT-IE
Functional annotation MazG nucleotide pyrophosphohydrolase domain containing protein, expressed
UniProt A0A1Z5R709 , C5YRI4
Pfam PF01502 PF01503 PF01502
Panther DB PTHR21256 PTHR21256:SF3
NCBI CDD -
KEGG Orthology K11755; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase
Gene Ontology GO:0004635; phosphoribosyl-AMP cyclohydrolase activity GO:0000105histidine biosynthetic process


Orthologs (automatic annotation)
TAIR AT1G31860 : histidine biosynthesis bifunctional protein (HISIE)
RAP-DB (Rice) LOC_Os01g16940.1 : MazG nucleotide pyrophosphohydrolase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a035205
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G113100 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
2 Sobic.003G122800 translin, putative, expressed -
3 Sobic.001G334100 1-5-phosphoribosyl-5-5-phosphoribosylaminomethylideneaminoimidazole-4-carboxamide isomerase, chloroplast precursor, putative, expressed K01814: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
4 Sobic.001G004100 WD domain, G-beta repeat domain containing protein, expressed -
5 Sobic.001G013300 SWIM zinc finger family protein, putative, expressed -
6 Sobic.010G110000 asparagine synthetase, putative, expressed K01953: asnB, asparagine synthase (glutamine-hydrolysing)
7 Sobic.001G033900 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
8 Sobic.002G208400 regulator protein, putative, expressed -
9 Sobic.010G141600 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K00122: formate dehydrogenase
10 Sobic.001G423300 outer membrane protein, OMP85 family, putative, expressed -
11 Sobic.002G155100 bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor, putative, expressed K12524: bifunctional aspartokinase / homoserine dehydrogenase 1
12 Sobic.003G129300 uridine kinase, putative, expressed -
13 Sobic.007G143500 splicing factor 3B subunit 5, putative, expressed K12832: SF3B5, splicing factor 3B subunit 5
14 Sobic.002G256800 acyl-ACP thioesterase, putative, expressed K10782: fatty acyl-ACP thioesterase A
15 Sobic.003G119900 inositol-1-monophosphatase, putative, expressed K18649: inositol-phosphate phosphatase / L-galactose 1-phosphate phosphatase / histidinol-phosphatase
16 Sobic.001G007800 WD domain, G-beta repeat domain containing protein, expressed K11806: DCAF13, DDB1- and CUL4-associated factor 13
17 Sobic.001G168900 bacterial transferase hexapeptide domain containing protein, expressed K03241: translation initiation factor eIF-2B subunit gamma
18 Sobic.008G115600 RNA polymerase Rpb7, N-terminal domain containing protein, expressed -
19 Sobic.005G187400 A49-like RNA polymerase I associated factor family protein, expressed K03005: RPA49, DNA-directed RNA polymerase I subunit RPA49
20 Sobic.007G187600 pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic008G162100 Sobic008G162100 Sobic009G113100 Sobic009G113100 Sobic008G162100--Sobic009G113100 Sobic003G122800 Sobic003G122800 Sobic008G162100--Sobic003G122800 Sobic001G334100 Sobic001G334100 Sobic008G162100--Sobic001G334100 Sobic001G004100 Sobic001G004100 Sobic008G162100--Sobic001G004100 Sobic001G013300 Sobic001G013300 Sobic008G162100--Sobic001G013300 Sobic010G110000 Sobic010G110000 Sobic008G162100--Sobic010G110000 Sobic001G033900 Sobic001G033900 Sobic008G162100--Sobic001G033900 Sobic002G208400 Sobic002G208400 Sobic008G162100--Sobic002G208400 Sobic010G141600 Sobic010G141600 Sobic008G162100--Sobic010G141600 Sobic009G069200 Sobic009G069200 Sobic009G113100--Sobic009G069200 Sobic001G090300 Sobic001G090300 Sobic009G113100--Sobic001G090300 Sobic005G198200 Sobic005G198200 Sobic009G113100--Sobic005G198200 Sobic009G113100--Sobic001G004100 Sobic009G113100--Sobic002G208400 Sobic007G187600 Sobic007G187600 Sobic009G113100--Sobic007G187600 Sobic003G214700 Sobic003G214700 Sobic009G113100--Sobic003G214700 Sobic009G113100--Sobic001G013300 Sobic006G061100 Sobic006G061100 Sobic009G113100--Sobic006G061100 Sobic002G367200 Sobic002G367200 Sobic003G122800--Sobic002G367200 Sobic003G122800--Sobic008G162100 Sobic009G028100 Sobic009G028100 Sobic003G122800--Sobic009G028100 Sobic003G129300 Sobic003G129300 Sobic003G122800--Sobic003G129300 Sobic002G095300 Sobic002G095300 Sobic003G122800--Sobic002G095300 Sobic003G326500 Sobic003G326500 Sobic003G122800--Sobic003G326500 Sobic003G102700 Sobic003G102700 Sobic003G122800--Sobic003G102700 Sobic003G119900 Sobic003G119900 Sobic003G122800--Sobic003G119900 Sobic007G082000 Sobic007G082000 Sobic003G122800--Sobic007G082000 Sobic007G143500 Sobic007G143500 Sobic001G334100--Sobic007G143500 Sobic003G184400 Sobic003G184400 Sobic001G334100--Sobic003G184400 Sobic005G199200 Sobic005G199200 Sobic001G334100--Sobic005G199200 Sobic003G259600 Sobic003G259600 Sobic001G334100--Sobic003G259600 Sobic005G059400 Sobic005G059400 Sobic001G334100--Sobic005G059400 Sobic002G142600 Sobic002G142600 Sobic001G334100--Sobic002G142600 Sobic006G180700 Sobic006G180700 Sobic001G334100--Sobic006G180700 Sobic004G067400 Sobic004G067400 Sobic001G334100--Sobic004G067400 Sobic005G000300 Sobic005G000300 Sobic001G334100--Sobic005G000300 Sobic004G031300 Sobic004G031300 Sobic001G004100--Sobic004G031300 Sobic001G004100--Sobic007G187600 Sobic001G004100--Sobic001G013300 Sobic001G004100--Sobic009G113100 Sobic009G255600 Sobic009G255600 Sobic001G004100--Sobic009G255600 Sobic001G408600 Sobic001G408600 Sobic001G004100--Sobic001G408600 Sobic001G373000 Sobic001G373000 Sobic001G004100--Sobic001G373000 Sobic002G142700 Sobic002G142700 Sobic001G004100--Sobic002G142700 Sobic001G034500 Sobic001G034500 Sobic001G004100--Sobic001G034500 Sobic004G285000 Sobic004G285000 Sobic001G013300--Sobic004G285000 Sobic001G013300--Sobic001G373000 Sobic008G147200 Sobic008G147200 Sobic001G013300--Sobic008G147200 Sobic001G346900 Sobic001G346900 Sobic001G013300--Sobic001G346900 Sobic001G013300--Sobic001G004100 Sobic010G215900 Sobic010G215900 Sobic001G013300--Sobic010G215900 Sobic003G409200 Sobic003G409200 Sobic001G013300--Sobic003G409200 Sobic001G013300--Sobic007G187600 Sobic001G023800 Sobic001G023800 Sobic001G013300--Sobic001G023800 Sobic003G415100 Sobic003G415100 Sobic010G110000--Sobic003G415100 Sobic010G110000--Sobic009G113100 Sobic010G110000--Sobic005G198200 Sobic003G122300 Sobic003G122300 Sobic010G110000--Sobic003G122300 Sobic008G179800 Sobic008G179800 Sobic010G110000--Sobic008G179800 Sobic010G110000--Sobic009G069200 Sobic002G315100 Sobic002G315100 Sobic010G110000--Sobic002G315100 Sobic006G170700 Sobic006G170700 Sobic010G110000--Sobic006G170700 Sobic010G110000--Sobic008G162100 Sobic007G017200 Sobic007G017200 Sobic001G033900--Sobic007G017200 Sobic001G033900--Sobic003G259600 Sobic001G033900--Sobic001G013300 Sobic003G361400 Sobic003G361400 Sobic001G033900--Sobic003G361400 Sobic010G136250 Sobic010G136250 Sobic001G033900--Sobic010G136250 Sobic006G140400 Sobic006G140400 Sobic001G033900--Sobic006G140400 Sobic003G360300 Sobic003G360300 Sobic001G033900--Sobic003G360300 Sobic005G108000 Sobic005G108000 Sobic001G033900--Sobic005G108000 Sobic001G033900--Sobic001G334100 Sobic002G208400--Sobic002G142700 Sobic001G115500 Sobic001G115500 Sobic002G208400--Sobic001G115500 Sobic002G208400--Sobic009G113100 Sobic006G032600 Sobic006G032600 Sobic002G208400--Sobic006G032600 Sobic003G008600 Sobic003G008600 Sobic002G208400--Sobic003G008600 Sobic004G030400 Sobic004G030400 Sobic002G208400--Sobic004G030400 Sobic002G208400--Sobic003G259600 Sobic001G123600 Sobic001G123600 Sobic002G208400--Sobic001G123600 Sobic002G208400--Sobic003G129300 Sobic009G030400 Sobic009G030400 Sobic010G141600--Sobic009G030400 Sobic010G141600--Sobic002G208400 Sobic009G002000 Sobic009G002000 Sobic010G141600--Sobic009G002000 Sobic006G193500 Sobic006G193500 Sobic010G141600--Sobic006G193500 Sobic010G141600--Sobic001G373000 Sobic010G141600--Sobic001G115500 Sobic010G141600--Sobic001G013300 Sobic010G141600--Sobic009G113100 Sobic002G263200 Sobic002G263200 Sobic010G141600--Sobic002G263200
Octagon: transcription factors


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