Gene annotation
Transcriptome id Sobic.010G197200.1
Synonym
Functional annotation peroxiredoxin, putative, expressed
UniProt A0A194YKC9
Pfam PF00578
Panther DB PTHR10430 PTHR10430:SF15
NCBI CDD KOG0541; Alkyl hydroperoxide reductase/peroxiredoxin
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity GO:0016209antioxidant activity


Orthologs (automatic annotation)
TAIR AT3G52960 : Thioredoxin superfamily protein
RAP-DB (Rice) LOC_Os06g42000.1 : peroxiredoxin, putative, expressed
MaizeGDB (Corn) Zm00025a051493
Brachypodium KQJ93793 , KQK17609
Barley HORVU7Hr1G093020.1 , HORVU6Hr1G034620.1
Wheat -
Populus -


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cDNA sequences
Sobic.010G197200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G059900 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
2 Sobic.001G530100 hydroxymethylglutaryl-CoA synthase, putative, expressed K01641: hydroxymethylglutaryl-CoA synthase
3 Sobic.001G167500 ribosomal protein L25, putative, expressed K02897: RP-L25, large subunit ribosomal protein L25
4 Sobic.009G081800 helicase, putative, expressed K11273: DDX11, CHL1, chromosome transmission fidelity protein 1
5 Sobic.006G127200 kelch repeat protein, putative, expressed -
6 Sobic.005G031000 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed K00225: L-galactono-1,4-lactone dehydrogenase
7 Sobic.002G426100 aldehyde dehydrogenase, putative, expressed -
8 Sobic.002G125800 phosphoglucomutase, putative, expressed -
9 Sobic.006G126800 expressed protein K10730: ATP-dependent DNA helicase Q4
10 Sobic.003G427200 uridine 5-monophosphate synthase, putative, expressed K13421: uridine monophosphate synthetase
K12486: stromal membrane-associated protein
11 Sobic.002G123600 expressed protein -
12 Sobic.002G095300 deoxynucleoside kinase family, putative, expressed K00893: deoxycitidine kinase
13 Sobic.007G167800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dihydroxy-acid dehydratase, putative, expressed K01687: dihydroxy-acid dehydratase
14 Sobic.003G392100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptidase, putative, expressed K01392: thimet oligopeptidase
15 Sobic.006G071628 - -
16 Sobic.004G082700 PPR repeat containing protein, expressed -
17 Sobic.003G102700 exostosin family protein, putative, expressed -
18 Sobic.010G018900 pentatricopeptide repeat domain containing protein, putative, expressed -
19 Sobic.008G090400 - -
20 Sobic.007G173000 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4


Gene co-expression network
sample Sobic010G197200 Sobic010G197200 Sobic008G059900 Sobic008G059900 Sobic010G197200--Sobic008G059900 Sobic001G530100 Sobic001G530100 Sobic010G197200--Sobic001G530100 Sobic001G167500 Sobic001G167500 Sobic010G197200--Sobic001G167500 Sobic009G081800 Sobic009G081800 Sobic010G197200--Sobic009G081800 Sobic006G127200 Sobic006G127200 Sobic010G197200--Sobic006G127200 Sobic005G031000 Sobic005G031000 Sobic010G197200--Sobic005G031000 Sobic002G426100 Sobic002G426100 Sobic010G197200--Sobic002G426100 Sobic002G125800 Sobic002G125800 Sobic010G197200--Sobic002G125800 Sobic006G126800 Sobic006G126800 Sobic010G197200--Sobic006G126800 Sobic008G059900--Sobic010G197200 Sobic008G059900--Sobic005G031000 Sobic001G199500 Sobic001G199500 Sobic008G059900--Sobic001G199500 Sobic004G253500 Sobic004G253500 Sobic008G059900--Sobic004G253500 Sobic010G073500 Sobic010G073500 Sobic008G059900--Sobic010G073500 Sobic003G102700 Sobic003G102700 Sobic008G059900--Sobic003G102700 Sobic006G071628 Sobic006G071628 Sobic008G059900--Sobic006G071628 Sobic006G237000 Sobic006G237000 Sobic008G059900--Sobic006G237000 Sobic003G392100 Sobic003G392100 Sobic008G059900--Sobic003G392100 Sobic003G045450 Sobic003G045450 Sobic001G530100--Sobic003G045450 Sobic001G530100--Sobic009G081800 Sobic001G530100--Sobic010G197200 Sobic004G291200 Sobic004G291200 Sobic001G530100--Sobic004G291200 Sobic003G147500 Sobic003G147500 Sobic001G530100--Sobic003G147500 Sobic001G530100--Sobic003G102700 Sobic003G326500 Sobic003G326500 Sobic001G530100--Sobic003G326500 Sobic007G112100 Sobic007G112100 Sobic001G530100--Sobic007G112100 Sobic007G219100 Sobic007G219100 Sobic001G530100--Sobic007G219100 Sobic010G134100 Sobic010G134100 Sobic001G167500--Sobic010G134100 Sobic001G413100 Sobic001G413100 Sobic001G167500--Sobic001G413100 Sobic009G041800 Sobic009G041800 Sobic001G167500--Sobic009G041800 Sobic002G367800 Sobic002G367800 Sobic001G167500--Sobic002G367800 Sobic001G176900 Sobic001G176900 Sobic001G167500--Sobic001G176900 Sobic003G130000 Sobic003G130000 Sobic001G167500--Sobic003G130000 Sobic004G082700 Sobic004G082700 Sobic001G167500--Sobic004G082700 Sobic001G167500--Sobic010G197200 Sobic001G214900 Sobic001G214900 Sobic001G167500--Sobic001G214900 Sobic009G081800--Sobic006G126800 Sobic010G252200 Sobic010G252200 Sobic009G081800--Sobic010G252200 Sobic003G041400 Sobic003G041400 Sobic009G081800--Sobic003G041400 Sobic009G081800--Sobic006G127200 Sobic009G081800--Sobic001G530100 Sobic001G239900 Sobic001G239900 Sobic009G081800--Sobic001G239900 Sobic010G269800 Sobic010G269800 Sobic009G081800--Sobic010G269800 Sobic005G210500 Sobic005G210500 Sobic009G081800--Sobic005G210500 Sobic006G119300 Sobic006G119300 Sobic009G081800--Sobic006G119300 Sobic004G306100 Sobic004G306100 Sobic006G127200--Sobic004G306100 Sobic002G271400 Sobic002G271400 Sobic006G127200--Sobic002G271400 Sobic010G257500 Sobic010G257500 Sobic006G127200--Sobic010G257500 Sobic002G123600 Sobic002G123600 Sobic006G127200--Sobic002G123600 Sobic003G409600 Sobic003G409600 Sobic006G127200--Sobic003G409600 Sobic003G226700 Sobic003G226700 Sobic006G127200--Sobic003G226700 Sobic006G127200--Sobic009G081800 Sobic010G103500 Sobic010G103500 Sobic006G127200--Sobic010G103500 Sobic001G025900 Sobic001G025900 Sobic006G127200--Sobic001G025900 Sobic004G356200 Sobic004G356200 Sobic005G031000--Sobic004G356200 Sobic001G200200 Sobic001G200200 Sobic005G031000--Sobic001G200200 Sobic005G031000--Sobic008G059900 Sobic005G031000--Sobic002G125800 Sobic001G434700 Sobic001G434700 Sobic005G031000--Sobic001G434700 Sobic005G031000--Sobic006G237000 Sobic001G533100 Sobic001G533100 Sobic005G031000--Sobic001G533100 Sobic004G037200 Sobic004G037200 Sobic005G031000--Sobic004G037200 Sobic010G155600 Sobic010G155600 Sobic005G031000--Sobic010G155600 Sobic009G120400 Sobic009G120400 Sobic002G426100--Sobic009G120400 Sobic008G111600 Sobic008G111600 Sobic002G426100--Sobic008G111600 Sobic006G181800 Sobic006G181800 Sobic002G426100--Sobic006G181800 Sobic002G078100 Sobic002G078100 Sobic002G426100--Sobic002G078100 Sobic002G043000 Sobic002G043000 Sobic002G426100--Sobic002G043000 Sobic006G017800 Sobic006G017800 Sobic002G426100--Sobic006G017800 Sobic002G066800 Sobic002G066800 Sobic002G426100--Sobic002G066800 Sobic007G186400 Sobic007G186400 Sobic002G426100--Sobic007G186400 Sobic004G129500 Sobic004G129500 Sobic002G426100--Sobic004G129500 Sobic002G125800--Sobic005G031000 Sobic002G125800--Sobic006G237000 Sobic002G125800--Sobic001G533100 Sobic002G125800--Sobic001G200200 Sobic001G004200 Sobic001G004200 Sobic002G125800--Sobic001G004200 Sobic002G125800--Sobic004G356200 Sobic010G192600 Sobic010G192600 Sobic002G125800--Sobic010G192600 Sobic003G166500 Sobic003G166500 Sobic002G125800--Sobic003G166500 Sobic004G030400 Sobic004G030400 Sobic002G125800--Sobic004G030400 Sobic006G126800--Sobic009G081800 Sobic006G126800--Sobic010G252200 Sobic006G126800--Sobic010G269800 Sobic006G126800--Sobic002G426100 Sobic006G126800--Sobic006G127200 Sobic002G173400 Sobic002G173400 Sobic006G126800--Sobic002G173400 Sobic002G095300 Sobic002G095300 Sobic006G126800--Sobic002G095300 Sobic002G286632 Sobic002G286632 Sobic006G126800--Sobic002G286632 Sobic006G126800--Sobic005G210500
Octagon: transcription factors


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