Gene annotation
Transcriptome id Sobic.003G252700.2,Sobic.003G252700.1
Synonym Sb03g030820
Functional annotation protein of unknown function DUF1421 domain containing protein, expressed
UniProt A0A1B6Q590 , C5XG31
Pfam PF07223
Panther DB PTHR31805 PTHR31805:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G28300 : Protein of unknown function (DUF1421)
RAP-DB (Rice) LOC_Os01g48220.1 : protein of unknown function DUF1421 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a028087 , Zm00025a038787
Brachypodium KQK09143 , KQK09145
Barley -
Wheat TraesCS3A02G272000 , TraesCS3B02G305700 , TraesCS3D02G271600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G130300 OsMan07 - Endo-Beta-Mannanase, expressed K19355: mannan endo-1,4-beta-mannosidase
2 Sobic.001G290600 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
3 Sobic.006G050000 TBC domain containing protein, expressed -
4 Sobic.003G378400 DUF803 domain containing, putative, expressed -
5 Sobic.004G165000 -(PubMedID : 26976818)@bile acid sodium symporter, putative, expressed K14347: SLC10A7, solute carrier family 10 (sodium/bile acid cotransporter), member 7
6 Sobic.001G069600 ad-003, putative, expressed K16219: NTMT1, METTL11A, protein N-terminal methyltransferase
7 Sobic.003G222500 phosphoglucomutase, putative, expressed K01835: phosphoglucomutase
8 Sobic.005G008600 double-stranded RNA binding motif containing protein, expressed -
9 Sobic.003G014000 peptidase C45, acyl-coenzyme A/6-aminopenicillanic acid acyl-transferase, putative, expressed -
10 Sobic.004G023700 N-dimethylguanosine tRNA methyltransferase, putative, expressed K00555: TRMT1, tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase
11 Sobic.001G006000 PPR repeat domain containing protein, putative, expressed -
12 Sobic.004G263400 expressed protein -
13 Sobic.001G070600 FAR1 family protein, expressed -
14 Sobic.002G404200 F-box domain containing protein, expressed -
15 Sobic.007G159000 heat shock protein DnaJ, putative, expressed -
16 Sobic.010G092700 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
17 Sobic.009G062500 -(PubMedID : 26976818)@triose phosphate/phosphate translocator, non-green plastid,chloroplast precursor, putative, expressed K15283: solute carrier family 35, member E1
18 Sobic.001G466900 expressed protein -
19 Sobic.003G439100 mitochondrial carrier protein, putative, expressed -
20 Sobic.004G265900 class I glutamine amidotransferase, putative, expressed K01956: carA, carbamoyl-phosphate synthase small subunit


Gene co-expression network
sample Sobic003G252700 Sobic003G252700 Sobic010G130300 Sobic010G130300 Sobic003G252700--Sobic010G130300 Sobic001G290600 Sobic001G290600 Sobic003G252700--Sobic001G290600 Sobic006G050000 Sobic006G050000 Sobic003G252700--Sobic006G050000 Sobic003G378400 Sobic003G378400 Sobic003G252700--Sobic003G378400 Sobic004G165000 Sobic004G165000 Sobic003G252700--Sobic004G165000 Sobic001G069600 Sobic001G069600 Sobic003G252700--Sobic001G069600 Sobic003G222500 Sobic003G222500 Sobic003G252700--Sobic003G222500 Sobic005G008600 Sobic005G008600 Sobic003G252700--Sobic005G008600 Sobic003G014000 Sobic003G014000 Sobic003G252700--Sobic003G014000 Sobic010G130300--Sobic004G165000 Sobic002G155000 Sobic002G155000 Sobic010G130300--Sobic002G155000 Sobic002G418600 Sobic002G418600 Sobic010G130300--Sobic002G418600 Sobic002G031700 Sobic002G031700 Sobic010G130300--Sobic002G031700 Sobic001G153300 Sobic001G153300 Sobic010G130300--Sobic001G153300 Sobic002G048200 Sobic002G048200 Sobic010G130300--Sobic002G048200 Sobic005G026000 Sobic005G026000 Sobic010G130300--Sobic005G026000 Sobic007G030800 Sobic007G030800 Sobic010G130300--Sobic007G030800 Sobic001G220000 Sobic001G220000 Sobic010G130300--Sobic001G220000 Sobic007G132200 Sobic007G132200 Sobic001G290600--Sobic007G132200 Sobic003G418200 Sobic003G418200 Sobic001G290600--Sobic003G418200 Sobic008G097600 Sobic008G097600 Sobic001G290600--Sobic008G097600 Sobic003G309300 Sobic003G309300 Sobic001G290600--Sobic003G309300 Sobic001G283300 Sobic001G283300 Sobic001G290600--Sobic001G283300 Sobic001G434700 Sobic001G434700 Sobic001G290600--Sobic001G434700 Sobic007G100500 Sobic007G100500 Sobic001G290600--Sobic007G100500 Sobic001G290600--Sobic003G252700 Sobic001G290600--Sobic010G130300 Sobic001G145000 Sobic001G145000 Sobic006G050000--Sobic001G145000 Sobic009G129100 Sobic009G129100 Sobic006G050000--Sobic009G129100 Sobic006G038500 Sobic006G038500 Sobic006G050000--Sobic006G038500 Sobic006G256600 Sobic006G256600 Sobic006G050000--Sobic006G256600 Sobic001G465700 Sobic001G465700 Sobic006G050000--Sobic001G465700 Sobic004G054400 Sobic004G054400 Sobic006G050000--Sobic004G054400 Sobic002G431300 Sobic002G431300 Sobic006G050000--Sobic002G431300 Sobic004G263400 Sobic004G263400 Sobic006G050000--Sobic004G263400 Sobic003G193700 Sobic003G193700 Sobic006G050000--Sobic003G193700 Sobic001G462200 Sobic001G462200 Sobic003G378400--Sobic001G462200 Sobic001G486700 Sobic001G486700 Sobic003G378400--Sobic001G486700 Sobic002G428800 Sobic002G428800 Sobic003G378400--Sobic002G428800 Sobic001G279900 Sobic001G279900 Sobic003G378400--Sobic001G279900 Sobic008G118900 Sobic008G118900 Sobic003G378400--Sobic008G118900 Sobic004G290000 Sobic004G290000 Sobic003G378400--Sobic004G290000 Sobic008G135200 Sobic008G135200 Sobic003G378400--Sobic008G135200 Sobic006G238700 Sobic006G238700 Sobic003G378400--Sobic006G238700 Sobic008G103800 Sobic008G103800 Sobic003G378400--Sobic008G103800 Sobic009G175500 Sobic009G175500 Sobic004G165000--Sobic009G175500 Sobic001G500600 Sobic001G500600 Sobic004G165000--Sobic001G500600 Sobic001G283700 Sobic001G283700 Sobic004G165000--Sobic001G283700 Sobic003G094350 Sobic003G094350 Sobic004G165000--Sobic003G094350 Sobic002G181000 Sobic002G181000 Sobic004G165000--Sobic002G181000 Sobic006G132000 Sobic006G132000 Sobic004G165000--Sobic006G132000 Sobic001G126300 Sobic001G126300 Sobic004G165000--Sobic001G126300 Sobic006G106400 Sobic006G106400 Sobic004G165000--Sobic006G106400 Sobic002G401800 Sobic002G401800 Sobic004G165000--Sobic002G401800 Sobic004G086700 Sobic004G086700 Sobic001G069600--Sobic004G086700 Sobic002G404200 Sobic002G404200 Sobic001G069600--Sobic002G404200 Sobic010G265300 Sobic010G265300 Sobic001G069600--Sobic010G265300 Sobic002G083900 Sobic002G083900 Sobic001G069600--Sobic002G083900 Sobic001G043800 Sobic001G043800 Sobic001G069600--Sobic001G043800 Sobic003G324100 Sobic003G324100 Sobic001G069600--Sobic003G324100 Sobic008G193300 Sobic008G193300 Sobic001G069600--Sobic008G193300 Sobic004G265900 Sobic004G265900 Sobic001G069600--Sobic004G265900 Sobic001G429300 Sobic001G429300 Sobic001G069600--Sobic001G429300 Sobic004G175500 Sobic004G175500 Sobic003G222500--Sobic004G175500 Sobic003G387800 Sobic003G387800 Sobic003G222500--Sobic003G387800 Sobic002G198600 Sobic002G198600 Sobic003G222500--Sobic002G198600 Sobic002G065200 Sobic002G065200 Sobic003G222500--Sobic002G065200 Sobic004G183100 Sobic004G183100 Sobic003G222500--Sobic004G183100 Sobic002G288300 Sobic002G288300 Sobic003G222500--Sobic002G288300 Sobic009G030900 Sobic009G030900 Sobic003G222500--Sobic009G030900 Sobic010G005500 Sobic010G005500 Sobic003G222500--Sobic010G005500 Sobic004G012900 Sobic004G012900 Sobic003G222500--Sobic004G012900 Sobic002G236500 Sobic002G236500 Sobic005G008600--Sobic002G236500 Sobic002G237800 Sobic002G237800 Sobic005G008600--Sobic002G237800 Sobic003G388000 Sobic003G388000 Sobic005G008600--Sobic003G388000 Sobic010G089800 Sobic010G089800 Sobic005G008600--Sobic010G089800 Sobic002G340200 Sobic002G340200 Sobic005G008600--Sobic002G340200 Sobic003G433200 Sobic003G433200 Sobic005G008600--Sobic003G433200 Sobic004G267900 Sobic004G267900 Sobic005G008600--Sobic004G267900 Sobic007G075800 Sobic007G075800 Sobic005G008600--Sobic007G075800 Sobic001G340000 Sobic001G340000 Sobic005G008600--Sobic001G340000 Sobic003G439000 Sobic003G439000 Sobic003G014000--Sobic003G439000 Sobic003G114100 Sobic003G114100 Sobic003G014000--Sobic003G114100 Sobic002G297400 Sobic002G297400 Sobic003G014000--Sobic002G297400 Sobic002G251400 Sobic002G251400 Sobic003G014000--Sobic002G251400 Sobic004G179200 Sobic004G179200 Sobic003G014000--Sobic004G179200 Sobic006G248200 Sobic006G248200 Sobic003G014000--Sobic006G248200 Sobic001G489800 Sobic001G489800 Sobic003G014000--Sobic001G489800 Sobic001G240000 Sobic001G240000 Sobic003G014000--Sobic001G240000 Sobic001G099000 Sobic001G099000 Sobic003G014000--Sobic001G099000
Octagon: transcription factors


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