Gene annotation
Transcriptome id Sobic.010G130300.1
Synonym Sb10g011830
Functional annotation OsMan07 - Endo-Beta-Mannanase, expressed
UniProt A0A1W0VSR8
Pfam PF00150
Panther DB PTHR31451 PTHR31451:SF16
NCBI CDD -
KEGG Orthology K19355; mannan endo-1,4-beta-mannosidase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT4G28320 : Glycosyl hydrolase superfamily protein
RAP-DB (Rice) LOC_Os06g20620.1 : OsMan07 - Endo-Beta-Mannanase, expressed
MaizeGDB (Corn) Zm00025a050600
Brachypodium PNT76002 , PNT76001 , PNT76000 , KQK18483 , PNT75999
Barley HORVU7Hr1G045910.10 , HORVU7Hr1G045910.4 , HORVU7Hr1G045910.5 , HORVU7Hr1G045910.6 , HORVU7Hr1G045910.7 , HORVU7Hr1G045910.1 , HORVU7Hr1G045910.2 , HORVU7Hr1G045910.3 , HORVU7Hr1G045910.9
Wheat TraesCS7A02G223800 , TraesCS7B02G190600 , TraesCS7B02G190600 , TraesCS7D02G225500
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G165000 -(PubMedID : 26976818)@bile acid sodium symporter, putative, expressed K14347: SLC10A7, solute carrier family 10 (sodium/bile acid cotransporter), member 7
2 Sobic.002G155000 EMB1381, putative, expressed -
3 Sobic.002G418600 expressed protein K15710: E3 ubiquitin-protein ligase SHPRH
4 Sobic.002G031700 - -
5 Sobic.001G153300 cytosolic 5-nucleotidase III, putative, expressed K01081: 5'-nucleotidase
6 Sobic.002G048200 pentatricopeptide, putative, expressed -
7 Sobic.005G026000 expressed protein -
8 Sobic.007G030800 expressed protein -
9 Sobic.001G220000 PPR repeat containing protein, expressed -
10 Sobic.007G132200 DNA-repair protein complementing XP-C cells, putative, expressed K10838: xeroderma pigmentosum group C-complementing protein
11 Sobic.001G116500 phosphoglucomutase, putative, expressed K01835: phosphoglucomutase
12 Sobic.002G073200 peptidase, M24 family protein, putative, expressed K01262: Xaa-Pro aminopeptidase
13 Sobic.006G119400 SWIM zinc finger family protein, putative, expressed -
14 Sobic.010G110332 - -
15 Sobic.004G018700 expressed protein -
16 Sobic.010G204900 formamidopyrimidine-DNA glycosylase, putative, expressed K10563: mutM, formamidopyrimidine-DNA glycosylase
17 Sobic.001G148101 - -
18 Sobic.002G181000 chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed -
19 Sobic.009G052700 4Fe-4S binding domain containing protein, expressed -
20 Sobic.001G190400 endonuclease/Exonuclease/phosphatase family protein, expressed -


Gene co-expression network
sample Sobic010G130300 Sobic010G130300 Sobic004G165000 Sobic004G165000 Sobic010G130300--Sobic004G165000 Sobic002G155000 Sobic002G155000 Sobic010G130300--Sobic002G155000 Sobic002G418600 Sobic002G418600 Sobic010G130300--Sobic002G418600 Sobic002G031700 Sobic002G031700 Sobic010G130300--Sobic002G031700 Sobic001G153300 Sobic001G153300 Sobic010G130300--Sobic001G153300 Sobic002G048200 Sobic002G048200 Sobic010G130300--Sobic002G048200 Sobic005G026000 Sobic005G026000 Sobic010G130300--Sobic005G026000 Sobic007G030800 Sobic007G030800 Sobic010G130300--Sobic007G030800 Sobic001G220000 Sobic001G220000 Sobic010G130300--Sobic001G220000 Sobic009G175500 Sobic009G175500 Sobic004G165000--Sobic009G175500 Sobic001G500600 Sobic001G500600 Sobic004G165000--Sobic001G500600 Sobic001G283700 Sobic001G283700 Sobic004G165000--Sobic001G283700 Sobic003G094350 Sobic003G094350 Sobic004G165000--Sobic003G094350 Sobic002G181000 Sobic002G181000 Sobic004G165000--Sobic002G181000 Sobic006G132000 Sobic006G132000 Sobic004G165000--Sobic006G132000 Sobic001G126300 Sobic001G126300 Sobic004G165000--Sobic001G126300 Sobic006G106400 Sobic006G106400 Sobic004G165000--Sobic006G106400 Sobic002G401800 Sobic002G401800 Sobic004G165000--Sobic002G401800 Sobic007G075800 Sobic007G075800 Sobic002G155000--Sobic007G075800 Sobic002G155000--Sobic002G031700 Sobic006G128400 Sobic006G128400 Sobic002G155000--Sobic006G128400 Sobic002G317100 Sobic002G317100 Sobic002G155000--Sobic002G317100 Sobic003G134000 Sobic003G134000 Sobic002G155000--Sobic003G134000 Sobic002G155000--Sobic001G153300 Sobic007G132200 Sobic007G132200 Sobic002G155000--Sobic007G132200 Sobic001G393900 Sobic001G393900 Sobic002G155000--Sobic001G393900 Sobic006G269800 Sobic006G269800 Sobic002G155000--Sobic006G269800 Sobic002G418600--Sobic002G181000 Sobic002G073200 Sobic002G073200 Sobic002G418600--Sobic002G073200 Sobic006G233700 Sobic006G233700 Sobic002G418600--Sobic006G233700 Sobic005G142800 Sobic005G142800 Sobic002G418600--Sobic005G142800 Sobic004G333400 Sobic004G333400 Sobic002G418600--Sobic004G333400 Sobic002G418600--Sobic004G165000 Sobic002G418600--Sobic001G500600 Sobic003G334100 Sobic003G334100 Sobic002G418600--Sobic003G334100 Sobic009G014100 Sobic009G014100 Sobic002G418600--Sobic009G014100 Sobic002G031700--Sobic007G075800 Sobic002G031700--Sobic002G155000 Sobic010G100800 Sobic010G100800 Sobic002G031700--Sobic010G100800 Sobic008G165900 Sobic008G165900 Sobic002G031700--Sobic008G165900 Sobic002G031700--Sobic003G134000 Sobic001G501300 Sobic001G501300 Sobic002G031700--Sobic001G501300 Sobic007G097400 Sobic007G097400 Sobic002G031700--Sobic007G097400 Sobic003G193200 Sobic003G193200 Sobic002G031700--Sobic003G193200 Sobic001G207200 Sobic001G207200 Sobic002G031700--Sobic001G207200 Sobic008G038600 Sobic008G038600 Sobic001G153300--Sobic008G038600 Sobic001G153300--Sobic006G269800 Sobic010G204900 Sobic010G204900 Sobic001G153300--Sobic010G204900 Sobic001G153300--Sobic002G155000 Sobic001G153300--Sobic007G030800 Sobic001G025800 Sobic001G025800 Sobic001G153300--Sobic001G025800 Sobic004G344000 Sobic004G344000 Sobic001G153300--Sobic004G344000 Sobic006G258300 Sobic006G258300 Sobic001G153300--Sobic006G258300 Sobic002G109600 Sobic002G109600 Sobic001G153300--Sobic002G109600 Sobic001G495200 Sobic001G495200 Sobic002G048200--Sobic001G495200 Sobic005G143500 Sobic005G143500 Sobic002G048200--Sobic005G143500 Sobic002G048200--Sobic001G126300 Sobic002G048200--Sobic001G025800 Sobic002G048200--Sobic002G181000 Sobic002G048200--Sobic004G165000 Sobic004G065300 Sobic004G065300 Sobic002G048200--Sobic004G065300 Sobic003G232700 Sobic003G232700 Sobic002G048200--Sobic003G232700 Sobic003G151500 Sobic003G151500 Sobic002G048200--Sobic003G151500 Sobic005G026000--Sobic010G100800 Sobic003G311900 Sobic003G311900 Sobic005G026000--Sobic003G311900 Sobic004G262700 Sobic004G262700 Sobic005G026000--Sobic004G262700 Sobic002G167500 Sobic002G167500 Sobic005G026000--Sobic002G167500 Sobic005G026000--Sobic004G344000 Sobic001G124100 Sobic001G124100 Sobic005G026000--Sobic001G124100 Sobic003G264800 Sobic003G264800 Sobic005G026000--Sobic003G264800 Sobic001G049500 Sobic001G049500 Sobic005G026000--Sobic001G049500 Sobic003G107500 Sobic003G107500 Sobic005G026000--Sobic003G107500 Sobic007G030800--Sobic001G153300 Sobic007G030800--Sobic006G269800 Sobic007G030800--Sobic002G155000 Sobic007G030800--Sobic002G317100 Sobic007G211800 Sobic007G211800 Sobic007G030800--Sobic007G211800 Sobic007G030800--Sobic008G038600 Sobic001G417500 Sobic001G417500 Sobic007G030800--Sobic001G417500 Sobic006G249500 Sobic006G249500 Sobic007G030800--Sobic006G249500 Sobic004G351800 Sobic004G351800 Sobic007G030800--Sobic004G351800 Sobic004G124400 Sobic004G124400 Sobic001G220000--Sobic004G124400 Sobic004G317700 Sobic004G317700 Sobic001G220000--Sobic004G317700 Sobic004G300100 Sobic004G300100 Sobic001G220000--Sobic004G300100 Sobic006G108200 Sobic006G108200 Sobic001G220000--Sobic006G108200 Sobic002G356900 Sobic002G356900 Sobic001G220000--Sobic002G356900 Sobic010G231500 Sobic010G231500 Sobic001G220000--Sobic010G231500 Sobic001G436400 Sobic001G436400 Sobic001G220000--Sobic001G436400 Sobic004G154800 Sobic004G154800 Sobic001G220000--Sobic004G154800 Sobic002G351600 Sobic002G351600 Sobic001G220000--Sobic002G351600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.