Gene annotation
Transcriptome id Sobic.004G018700.2,Sobic.004G018700.5,Sobic.004G018700.1,Sobic.004G018700.3,Sobic.004G018700.4
Synonym Sb04g001753
Functional annotation expressed protein
UniProt A0A194YMA6 , A0A194YM79 , A0A1Z5RKZ9 , A0A194YM93 , A0A194YM71
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g02910.3,LOC_Os02g02910.2,LOC_Os02g02910.1 : expressed protein
MaizeGDB (Corn) Zm00025a034918
Brachypodium -
Barley -
Wheat TraesCS6D02G066100 , TraesCS6D02G066100 , TraesCS6D02G066100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G193200 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
2 Sobic.006G226601 - -
3 Sobic.010G231500 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
4 Sobic.001G220000 PPR repeat containing protein, expressed -
5 Sobic.010G110332 - -
6 Sobic.003G328100 expressed protein -
7 Sobic.004G300100 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein
8 Sobic.004G165900 SOUL heme-binding protein, putative, expressed -
9 Sobic.009G175500 acetyltransferase, GNAT family, putative, expressed -
10 Sobic.007G162600 uncharacterized protein all1601, putative, expressed K18010: 7-hydroxymethyl chlorophyll a reductase
11 Sobic.003G108900 -(PubMedID : 26465154)@peptidase, putative, expressed -
12 Sobic.004G124400 uncharacterized conserved membrane protein specific to cyanobacteria, putative, expressed -
13 Sobic.003G179400 NLI interacting factor(NIF) family protein(PubMedID : 26320239)@NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
14 Sobic.001G128600 -(PubMedID : 26465154)@DUF1517 domain containing protein, putative, expressed -
15 Sobic.010G076800 ferredoxin thioredoxin reductase catalytic beta chain family protein(PubMedID : 26465154)@ferredoxin-thioredoxin reductase catalytic chain, chloroplast precursor, putative, expressed K17892: ferredoxin-thioredoxin reductase catalytic chain
16 Sobic.004G165000 -(PubMedID : 26976818)@bile acid sodium symporter, putative, expressed K14347: SLC10A7, solute carrier family 10 (sodium/bile acid cotransporter), member 7
17 Sobic.007G053800 RNA polymerase sigma factor, putative, expressed K03086: RNA polymerase primary sigma factor
18 Sobic.010G110400 - -
19 Sobic.006G097500 zeaxanthin epoxidase, chloroplast precursor, putative, expressed K09838: ZEP, zeaxanthin epoxidase
20 Sobic.001G436400 immature colon carcinoma transcript 1 protein precursor, putative, expressed K15033: peptidyl-tRNA hydrolase ICT1


Gene co-expression network
sample Sobic004G018700 Sobic004G018700 Sobic006G193200 Sobic006G193200 Sobic004G018700--Sobic006G193200 Sobic006G226601 Sobic006G226601 Sobic004G018700--Sobic006G226601 Sobic010G231500 Sobic010G231500 Sobic004G018700--Sobic010G231500 Sobic001G220000 Sobic001G220000 Sobic004G018700--Sobic001G220000 Sobic010G110332 Sobic010G110332 Sobic004G018700--Sobic010G110332 Sobic003G328100 Sobic003G328100 Sobic004G018700--Sobic003G328100 Sobic004G300100 Sobic004G300100 Sobic004G018700--Sobic004G300100 Sobic004G165900 Sobic004G165900 Sobic004G018700--Sobic004G165900 Sobic009G175500 Sobic009G175500 Sobic004G018700--Sobic009G175500 Sobic004G300000 Sobic004G300000 Sobic006G193200--Sobic004G300000 Sobic006G193200--Sobic004G165900 Sobic006G214700 Sobic006G214700 Sobic006G193200--Sobic006G214700 Sobic001G118400 Sobic001G118400 Sobic006G193200--Sobic001G118400 Sobic010G076800 Sobic010G076800 Sobic006G193200--Sobic010G076800 Sobic002G331800 Sobic002G331800 Sobic006G193200--Sobic002G331800 Sobic006G140700 Sobic006G140700 Sobic006G193200--Sobic006G140700 Sobic006G193200--Sobic003G328100 Sobic010G035500 Sobic010G035500 Sobic006G193200--Sobic010G035500 Sobic001G276300 Sobic001G276300 Sobic006G226601--Sobic001G276300 Sobic006G226601--Sobic003G328100 Sobic007G169100 Sobic007G169100 Sobic006G226601--Sobic007G169100 Sobic004G006400 Sobic004G006400 Sobic006G226601--Sobic004G006400 Sobic006G226601--Sobic010G231500 Sobic006G097500 Sobic006G097500 Sobic006G226601--Sobic006G097500 Sobic002G005600 Sobic002G005600 Sobic006G226601--Sobic002G005600 Sobic007G058001 Sobic007G058001 Sobic006G226601--Sobic007G058001 Sobic009G207900 Sobic009G207900 Sobic006G226601--Sobic009G207900 Sobic009G004100 Sobic009G004100 Sobic010G231500--Sobic009G004100 Sobic010G231500--Sobic006G097500 Sobic010G231500--Sobic004G300100 Sobic004G103300 Sobic004G103300 Sobic010G231500--Sobic004G103300 Sobic007G124500 Sobic007G124500 Sobic010G231500--Sobic007G124500 Sobic005G028800 Sobic005G028800 Sobic010G231500--Sobic005G028800 Sobic004G124400 Sobic004G124400 Sobic010G231500--Sobic004G124400 Sobic001G368600 Sobic001G368600 Sobic010G231500--Sobic001G368600 Sobic002G356900 Sobic002G356900 Sobic010G231500--Sobic002G356900 Sobic001G220000--Sobic004G124400 Sobic004G317700 Sobic004G317700 Sobic001G220000--Sobic004G317700 Sobic001G220000--Sobic004G300100 Sobic006G108200 Sobic006G108200 Sobic001G220000--Sobic006G108200 Sobic001G220000--Sobic002G356900 Sobic001G220000--Sobic010G231500 Sobic001G436400 Sobic001G436400 Sobic001G220000--Sobic001G436400 Sobic004G154800 Sobic004G154800 Sobic001G220000--Sobic004G154800 Sobic002G351600 Sobic002G351600 Sobic001G220000--Sobic002G351600 Sobic010G110400 Sobic010G110400 Sobic010G110332--Sobic010G110400 Sobic001G060500 Sobic001G060500 Sobic010G110332--Sobic001G060500 Sobic004G248400 Sobic004G248400 Sobic010G110332--Sobic004G248400 Sobic009G052700 Sobic009G052700 Sobic010G110332--Sobic009G052700 Sobic002G418600 Sobic002G418600 Sobic010G110332--Sobic002G418600 Sobic006G233700 Sobic006G233700 Sobic010G110332--Sobic006G233700 Sobic003G125900 Sobic003G125900 Sobic010G110332--Sobic003G125900 Sobic002G181000 Sobic002G181000 Sobic010G110332--Sobic002G181000 Sobic003G334100 Sobic003G334100 Sobic010G110332--Sobic003G334100 Sobic003G328100--Sobic007G169100 Sobic003G328100--Sobic001G118400 Sobic006G155500 Sobic006G155500 Sobic003G328100--Sobic006G155500 Sobic003G328100--Sobic006G140700 Sobic007G107700 Sobic007G107700 Sobic003G328100--Sobic007G107700 Sobic001G286600 Sobic001G286600 Sobic003G328100--Sobic001G286600 Sobic003G328100--Sobic010G231500 Sobic004G281900 Sobic004G281900 Sobic003G328100--Sobic004G281900 Sobic003G328100--Sobic006G097500 Sobic004G300100--Sobic010G231500 Sobic004G300100--Sobic002G356900 Sobic004G300100--Sobic004G317700 Sobic002G081400 Sobic002G081400 Sobic004G300100--Sobic002G081400 Sobic004G271600 Sobic004G271600 Sobic004G300100--Sobic004G271600 Sobic009G170200 Sobic009G170200 Sobic004G300100--Sobic009G170200 Sobic002G132400 Sobic002G132400 Sobic004G300100--Sobic002G132400 Sobic004G300100--Sobic004G165900 Sobic004G252500 Sobic004G252500 Sobic004G300100--Sobic004G252500 Sobic004G165900--Sobic004G252500 Sobic003G108900 Sobic003G108900 Sobic004G165900--Sobic003G108900 Sobic004G165900--Sobic010G231500 Sobic004G165900--Sobic006G097500 Sobic004G165900--Sobic001G118400 Sobic004G165900--Sobic001G368600 Sobic004G165900--Sobic009G004100 Sobic006G025400 Sobic006G025400 Sobic004G165900--Sobic006G025400 Sobic002G061900 Sobic002G061900 Sobic004G165900--Sobic002G061900 Sobic001G005200 Sobic001G005200 Sobic009G175500--Sobic001G005200 Sobic004G336200 Sobic004G336200 Sobic009G175500--Sobic004G336200 Sobic001G128600 Sobic001G128600 Sobic009G175500--Sobic001G128600 Sobic003G160800 Sobic003G160800 Sobic009G175500--Sobic003G160800 Sobic003G387100 Sobic003G387100 Sobic009G175500--Sobic003G387100 Sobic001G500600 Sobic001G500600 Sobic009G175500--Sobic001G500600 Sobic001G283700 Sobic001G283700 Sobic009G175500--Sobic001G283700 Sobic001G126300 Sobic001G126300 Sobic009G175500--Sobic001G126300 Sobic010G035400 Sobic010G035400 Sobic009G175500--Sobic010G035400
Octagon: transcription factors


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