Gene annotation
Transcriptome id Sobic.010G110400.1
Synonym
Functional annotation -
UniProt A0A194YJH1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G233700 PolI-like DNA polymerase, putative, expressed K02335: DNA polymerase I
2 Sobic.003G203300 stress regulated protein, putative, expressed -
3 Sobic.009G170200 translation initiation factor IF-2, chloroplast precursor, putative, expressed K02519: infB, translation initiation factor IF-2
4 Sobic.002G198300 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.001G500600 pseudouridine synthase family protein, putative, expressed -
6 Sobic.004G300100 hydrolase, alpha/beta fold family domain containing protein, expressed K07019: uncharacterized protein
7 Sobic.003G070900 inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
8 Sobic.006G197300 expressed protein -
9 Sobic.001G378100 relA-SpoT like protein RSH1, putative, expressed -
10 Sobic.001G060500 YT521-B, putative, expressed -
11 Sobic.002G073200 peptidase, M24 family protein, putative, expressed K01262: Xaa-Pro aminopeptidase
12 Sobic.002G081400 ABC1 family domain containing protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
13 Sobic.008G074000 OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
14 Sobic.006G232600 amine oxidase, flavin-containing, domain containing protein, expressed K02293: PDS, 15-cis-phytoene desaturase
15 Sobic.003G094350 - K01869: LARS, leucyl-tRNA synthetase
16 Sobic.007G103400 expressed protein -
17 Sobic.004G165900 SOUL heme-binding protein, putative, expressed -
18 Sobic.001G368600 NAD dependent epimerase/dehydratase family protein, putative, expressed -
19 Sobic.001G436400 immature colon carcinoma transcript 1 protein precursor, putative, expressed K15033: peptidyl-tRNA hydrolase ICT1
20 Sobic.002G298800 PAP fibrillin family domain containing protein, expressed -


Gene co-expression network
sample Sobic010G110400 Sobic010G110400 Sobic006G233700 Sobic006G233700 Sobic010G110400--Sobic006G233700 Sobic003G203300 Sobic003G203300 Sobic010G110400--Sobic003G203300 Sobic009G170200 Sobic009G170200 Sobic010G110400--Sobic009G170200 Sobic002G198300 Sobic002G198300 Sobic010G110400--Sobic002G198300 Sobic001G500600 Sobic001G500600 Sobic010G110400--Sobic001G500600 Sobic004G300100 Sobic004G300100 Sobic010G110400--Sobic004G300100 Sobic003G070900 Sobic003G070900 Sobic010G110400--Sobic003G070900 Sobic006G197300 Sobic006G197300 Sobic010G110400--Sobic006G197300 Sobic001G378100 Sobic001G378100 Sobic010G110400--Sobic001G378100 Sobic006G232600 Sobic006G232600 Sobic006G233700--Sobic006G232600 Sobic006G233700--Sobic001G500600 Sobic006G233700--Sobic010G110400 Sobic006G233700--Sobic009G170200 Sobic001G060500 Sobic001G060500 Sobic006G233700--Sobic001G060500 Sobic006G233700--Sobic003G203300 Sobic010G171600 Sobic010G171600 Sobic006G233700--Sobic010G171600 Sobic006G233700--Sobic003G070900 Sobic001G219700 Sobic001G219700 Sobic006G233700--Sobic001G219700 Sobic003G203300--Sobic006G232600 Sobic008G074000 Sobic008G074000 Sobic003G203300--Sobic008G074000 Sobic003G203300--Sobic001G378100 Sobic009G093100 Sobic009G093100 Sobic003G203300--Sobic009G093100 Sobic003G203300--Sobic009G170200 Sobic001G504400 Sobic001G504400 Sobic003G203300--Sobic001G504400 Sobic002G081400 Sobic002G081400 Sobic003G203300--Sobic002G081400 Sobic003G203300--Sobic006G233700 Sobic004G207400 Sobic004G207400 Sobic003G203300--Sobic004G207400 Sobic009G170200--Sobic003G070900 Sobic009G170200--Sobic006G232600 Sobic007G087100 Sobic007G087100 Sobic009G170200--Sobic007G087100 Sobic004G103300 Sobic004G103300 Sobic009G170200--Sobic004G103300 Sobic002G133900 Sobic002G133900 Sobic009G170200--Sobic002G133900 Sobic001G077300 Sobic001G077300 Sobic009G170200--Sobic001G077300 Sobic004G353100 Sobic004G353100 Sobic009G170200--Sobic004G353100 Sobic009G170200--Sobic001G378100 Sobic007G103400 Sobic007G103400 Sobic009G170200--Sobic007G103400 Sobic002G298800 Sobic002G298800 Sobic002G198300--Sobic002G298800 Sobic001G393300 Sobic001G393300 Sobic002G198300--Sobic001G393300 Sobic002G198300--Sobic007G103400 Sobic001G368600 Sobic001G368600 Sobic002G198300--Sobic001G368600 Sobic010G125833 Sobic010G125833 Sobic002G198300--Sobic010G125833 Sobic002G198300--Sobic001G504400 Sobic002G198300--Sobic001G378100 Sobic003G306200 Sobic003G306200 Sobic002G198300--Sobic003G306200 Sobic001G536700 Sobic001G536700 Sobic002G198300--Sobic001G536700 Sobic003G094350 Sobic003G094350 Sobic001G500600--Sobic003G094350 Sobic004G336200 Sobic004G336200 Sobic001G500600--Sobic004G336200 Sobic001G500600--Sobic006G197300 Sobic001G500600--Sobic003G070900 Sobic003G141100 Sobic003G141100 Sobic001G500600--Sobic003G141100 Sobic003G232700 Sobic003G232700 Sobic001G500600--Sobic003G232700 Sobic003G287900 Sobic003G287900 Sobic001G500600--Sobic003G287900 Sobic001G500600--Sobic002G133900 Sobic003G372900 Sobic003G372900 Sobic001G500600--Sobic003G372900 Sobic010G231500 Sobic010G231500 Sobic004G300100--Sobic010G231500 Sobic002G356900 Sobic002G356900 Sobic004G300100--Sobic002G356900 Sobic004G317700 Sobic004G317700 Sobic004G300100--Sobic004G317700 Sobic004G300100--Sobic002G081400 Sobic004G271600 Sobic004G271600 Sobic004G300100--Sobic004G271600 Sobic004G300100--Sobic009G170200 Sobic002G132400 Sobic002G132400 Sobic004G300100--Sobic002G132400 Sobic004G165900 Sobic004G165900 Sobic004G300100--Sobic004G165900 Sobic004G252500 Sobic004G252500 Sobic004G300100--Sobic004G252500 Sobic003G070900--Sobic002G133900 Sobic003G070900--Sobic003G287900 Sobic003G070900--Sobic009G170200 Sobic003G070900--Sobic003G094350 Sobic001G118400 Sobic001G118400 Sobic003G070900--Sobic001G118400 Sobic003G070900--Sobic001G500600 Sobic003G070900--Sobic004G353100 Sobic003G070900--Sobic008G074000 Sobic008G006100 Sobic008G006100 Sobic003G070900--Sobic008G006100 Sobic006G197300--Sobic001G500600 Sobic006G197300--Sobic004G336200 Sobic006G197300--Sobic003G232700 Sobic006G197300--Sobic003G094350 Sobic001G516901 Sobic001G516901 Sobic006G197300--Sobic001G516901 Sobic006G197300--Sobic003G070900 Sobic006G197300--Sobic003G287900 Sobic001G436400 Sobic001G436400 Sobic006G197300--Sobic001G436400 Sobic006G197300--Sobic007G103400 Sobic003G073800 Sobic003G073800 Sobic001G378100--Sobic003G073800 Sobic001G217900 Sobic001G217900 Sobic001G378100--Sobic001G217900 Sobic001G378100--Sobic001G504400 Sobic001G378100--Sobic001G077300 Sobic001G540600 Sobic001G540600 Sobic001G378100--Sobic001G540600 Sobic001G378100--Sobic001G536700 Sobic001G378100--Sobic006G232600 Sobic001G378100--Sobic009G170200 Sobic001G258200 Sobic001G258200 Sobic001G378100--Sobic001G258200
Octagon: transcription factors


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