Gene annotation
Transcriptome id Sobic.001G153300.3,Sobic.001G153300.1,Sobic.001G153300.5,Sobic.001G153300.2,Sobic.001G153300.4
Synonym Sb01g013310
Functional annotation cytosolic 5-nucleotidase III, putative, expressed
UniProt C5WR46
Pfam PF05822
Panther DB PTHR13045 PTHR13045:SF0
NCBI CDD KOG3128; Uncharacterized conserved protein
KEGG Orthology K01081; 5'-nucleotidase
Gene Ontology GO:0008253; 5'-nucleotidase activity GO:0005737cytoplasm GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT2G38680 : 5\'-nucleotidases;magnesium ion binding
RAP-DB (Rice) LOC_Os03g44660.1 : cytosolic 5-nucleotidase III, putative, expressed
MaizeGDB (Corn) Zm00025a017238
Brachypodium -
Barley HORVU5Hr1G092490.3 , HORVU5Hr1G092490.2 , HORVU5Hr1G092490.1 , HORVU5Hr1G092490.7 , HORVU5Hr1G092490.6 , HORVU5Hr1G092490.5 , HORVU5Hr1G092490.4 , HORVU5Hr1G092490.9 , HORVU5Hr1G092490.8 , HORVU5Hr1G092490.12 , HORVU5Hr1G092490.11 , HORVU5Hr1G092490.10
Wheat TraesCS5A02G371900 , TraesCS5D02G381400 , TraesCS5B02G374000 , TraesCS5B02G374000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G038600 pyridoxal-dependent decarboxylase protein, putative, expressed K01586: diaminopimelate decarboxylase
2 Sobic.006G269800 TFIIH basal transcription factor complex p52 subunit, putative, expressed K03144: TFIIH4, GTF2H4, transcription initiation factor TFIIH subunit 4
3 Sobic.010G204900 formamidopyrimidine-DNA glycosylase, putative, expressed K10563: mutM, formamidopyrimidine-DNA glycosylase
4 Sobic.002G155000 EMB1381, putative, expressed -
5 Sobic.007G030800 expressed protein -
6 Sobic.001G025800 pentatricopeptide, putative, expressed -
7 Sobic.004G344000 expressed protein -
8 Sobic.006G258300 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
9 Sobic.002G109600 tic22-like family domain containing protein, expressed -
10 Sobic.004G003900 nitric oxide synthase 1, putative, expressed K13427: nitric-oxide synthase, plant
11 Sobic.004G171200 WD domain, G-beta repeat domain containing protein, expressed K13124: mitogen-activated protein kinase organizer 1
12 Sobic.001G540800 DNA binding protein, putative, expressed -
13 Sobic.001G275300 - K10899: ATP-dependent DNA helicase Q1
14 Sobic.004G019500 pentatricopeptide, putative, expressed -
15 Sobic.002G202000 double-stranded RNA binding motif containing protein, expressed -
16 Sobic.002G317100 PPR repeat containing protein, expressed -
17 Sobic.001G085800 WD domain, G-beta repeat domain containing protein, expressed K14406: cleavage stimulation factor subunit 1
18 Sobic.006G193300 nucleolar complex protein, putative, expressed K14771: NOC4, U3 small nucleolar RNA-associated protein 19
19 Sobic.010G100800 alpha-mannosidase 2, putative, expressed K01231: alpha-mannosidase II
20 Sobic.004G356200 expressed protein -


Gene co-expression network
sample Sobic001G153300 Sobic001G153300 Sobic008G038600 Sobic008G038600 Sobic001G153300--Sobic008G038600 Sobic006G269800 Sobic006G269800 Sobic001G153300--Sobic006G269800 Sobic010G204900 Sobic010G204900 Sobic001G153300--Sobic010G204900 Sobic002G155000 Sobic002G155000 Sobic001G153300--Sobic002G155000 Sobic007G030800 Sobic007G030800 Sobic001G153300--Sobic007G030800 Sobic001G025800 Sobic001G025800 Sobic001G153300--Sobic001G025800 Sobic004G344000 Sobic004G344000 Sobic001G153300--Sobic004G344000 Sobic006G258300 Sobic006G258300 Sobic001G153300--Sobic006G258300 Sobic002G109600 Sobic002G109600 Sobic001G153300--Sobic002G109600 Sobic002G317100 Sobic002G317100 Sobic008G038600--Sobic002G317100 Sobic006G128400 Sobic006G128400 Sobic008G038600--Sobic006G128400 Sobic002G191100 Sobic002G191100 Sobic008G038600--Sobic002G191100 Sobic007G132200 Sobic007G132200 Sobic008G038600--Sobic007G132200 Sobic008G038600--Sobic001G153300 Sobic006G193300 Sobic006G193300 Sobic008G038600--Sobic006G193300 Sobic004G003900 Sobic004G003900 Sobic008G038600--Sobic004G003900 Sobic002G092050 Sobic002G092050 Sobic008G038600--Sobic002G092050 Sobic003G399100 Sobic003G399100 Sobic008G038600--Sobic003G399100 Sobic002G145800 Sobic002G145800 Sobic006G269800--Sobic002G145800 Sobic003G052800 Sobic003G052800 Sobic006G269800--Sobic003G052800 Sobic008G147200 Sobic008G147200 Sobic006G269800--Sobic008G147200 Sobic008G017100 Sobic008G017100 Sobic006G269800--Sobic008G017100 Sobic001G393900 Sobic001G393900 Sobic006G269800--Sobic001G393900 Sobic002G043100 Sobic002G043100 Sobic006G269800--Sobic002G043100 Sobic001G417500 Sobic001G417500 Sobic006G269800--Sobic001G417500 Sobic004G107200 Sobic004G107200 Sobic006G269800--Sobic004G107200 Sobic002G425500 Sobic002G425500 Sobic006G269800--Sobic002G425500 Sobic001G032200 Sobic001G032200 Sobic010G204900--Sobic001G032200 Sobic010G204900--Sobic001G025800 Sobic003G267500 Sobic003G267500 Sobic010G204900--Sobic003G267500 Sobic010G100800 Sobic010G100800 Sobic010G204900--Sobic010G100800 Sobic003G120300 Sobic003G120300 Sobic010G204900--Sobic003G120300 Sobic004G130300 Sobic004G130300 Sobic010G204900--Sobic004G130300 Sobic001G250700 Sobic001G250700 Sobic010G204900--Sobic001G250700 Sobic010G204900--Sobic004G003900 Sobic005G117300 Sobic005G117300 Sobic010G204900--Sobic005G117300 Sobic007G075800 Sobic007G075800 Sobic002G155000--Sobic007G075800 Sobic002G031700 Sobic002G031700 Sobic002G155000--Sobic002G031700 Sobic002G155000--Sobic006G128400 Sobic002G155000--Sobic002G317100 Sobic003G134000 Sobic003G134000 Sobic002G155000--Sobic003G134000 Sobic002G155000--Sobic001G153300 Sobic002G155000--Sobic007G132200 Sobic002G155000--Sobic001G393900 Sobic002G155000--Sobic006G269800 Sobic007G030800--Sobic001G153300 Sobic007G030800--Sobic006G269800 Sobic007G030800--Sobic002G155000 Sobic007G030800--Sobic002G317100 Sobic007G211800 Sobic007G211800 Sobic007G030800--Sobic007G211800 Sobic007G030800--Sobic008G038600 Sobic007G030800--Sobic001G417500 Sobic006G249500 Sobic006G249500 Sobic007G030800--Sobic006G249500 Sobic004G351800 Sobic004G351800 Sobic007G030800--Sobic004G351800 Sobic001G025800--Sobic004G003900 Sobic001G025800--Sobic005G117300 Sobic001G495200 Sobic001G495200 Sobic001G025800--Sobic001G495200 Sobic002G048200 Sobic002G048200 Sobic001G025800--Sobic002G048200 Sobic009G251000 Sobic009G251000 Sobic001G025800--Sobic009G251000 Sobic001G513800 Sobic001G513800 Sobic001G025800--Sobic001G513800 Sobic001G025800--Sobic003G267500 Sobic007G015300 Sobic007G015300 Sobic001G025800--Sobic007G015300 Sobic009G092900 Sobic009G092900 Sobic001G025800--Sobic009G092900 Sobic005G026000 Sobic005G026000 Sobic004G344000--Sobic005G026000 Sobic001G275300 Sobic001G275300 Sobic004G344000--Sobic001G275300 Sobic010G183300 Sobic010G183300 Sobic004G344000--Sobic010G183300 Sobic003G310300 Sobic003G310300 Sobic004G344000--Sobic003G310300 Sobic006G093300 Sobic006G093300 Sobic004G344000--Sobic006G093300 Sobic003G107500 Sobic003G107500 Sobic004G344000--Sobic003G107500 Sobic006G039400 Sobic006G039400 Sobic004G344000--Sobic006G039400 Sobic001G178300 Sobic001G178300 Sobic004G344000--Sobic001G178300 Sobic004G344000--Sobic001G153300 Sobic006G258300--Sobic001G153300 Sobic006G258300--Sobic001G178300 Sobic001G277400 Sobic001G277400 Sobic006G258300--Sobic001G277400 Sobic004G165000 Sobic004G165000 Sobic006G258300--Sobic004G165000 Sobic005G231100 Sobic005G231100 Sobic006G258300--Sobic005G231100 Sobic006G258300--Sobic004G344000 Sobic006G258300--Sobic001G025800 Sobic001G244300 Sobic001G244300 Sobic006G258300--Sobic001G244300 Sobic004G018000 Sobic004G018000 Sobic006G258300--Sobic004G018000 Sobic005G172500 Sobic005G172500 Sobic002G109600--Sobic005G172500 Sobic002G109600--Sobic001G275300 Sobic004G340400 Sobic004G340400 Sobic002G109600--Sobic004G340400 Sobic002G109600--Sobic001G153300 Sobic002G109600--Sobic001G244300 Sobic001G401500 Sobic001G401500 Sobic002G109600--Sobic001G401500 Sobic006G088200 Sobic006G088200 Sobic002G109600--Sobic006G088200 Sobic004G359100 Sobic004G359100 Sobic002G109600--Sobic004G359100 Sobic002G009200 Sobic002G009200 Sobic002G109600--Sobic002G009200
Octagon: transcription factors


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