Gene annotation
Transcriptome id Sobic.004G263400.1,Sobic.004G263400.2
Synonym
Functional annotation expressed protein
UniProt A0A194YST7
Pfam -
Panther DB PTHR35686 PTHR35686:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G02960 : -
RAP-DB (Rice) LOC_Os02g48116.1 : expressed protein
MaizeGDB (Corn) Zm00025a033281 , Zm00025a021765
Brachypodium KQK00986 , KQK00987
Barley HORVU0Hr1G016880.20 , HORVU0Hr1G016880.21 , HORVU0Hr1G016880.22 , HORVU0Hr1G016880.23 , HORVU0Hr1G016880.5 , HORVU0Hr1G016880.4 , HORVU0Hr1G016880.7 , HORVU0Hr1G016880.6 , HORVU0Hr1G016880.1 , HORVU0Hr1G016880.3 , HORVU0Hr1G016880.2 , HORVU0Hr1G016880.9 , HORVU0Hr1G016880.8 , HORVU0Hr1G016880.11 , HORVU0Hr1G016880.10 , HORVU0Hr1G016880.13 , HORVU0Hr1G016880.12 , HORVU0Hr1G016880.15 , HORVU0Hr1G016880.14 , HORVU0Hr1G016880.17 , HORVU0Hr1G016880.16 , HORVU0Hr1G016880.19 , HORVU0Hr1G016880.18
Wheat TraesCS6D02G257200 , TraesCS6D02G257200 , TraesCS6A02G276800 , TraesCS6B02G304400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G244900 expressed protein -
2 Sobic.001G145000 expressed protein K14376: poly(A) polymerase
3 Sobic.001G465700 aminotransferase, putative, expressed K00833: adenosylmethionine---8-amino-7-oxononanoate aminotransferase
4 Sobic.001G288700 armadillo/beta-catenin-like repeat containing protein, expressed -
5 Sobic.004G026500 expressed protein -
6 Sobic.002G321901 - -
7 Sobic.003G340600 VHS and GAT domain containing protein, expressed -
8 Sobic.006G050000 TBC domain containing protein, expressed -
9 Sobic.001G300100 - -
10 Sobic.008G172300 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
11 Sobic.003G398700 expressed protein K15210: snRNA-activating protein complex subunit 3
12 Sobic.010G049000 expressed protein -
13 Sobic.002G193100 expressed protein -
14 Sobic.002G346200 expressed protein -
15 Sobic.002G275700 pantothenate kinase, putative, expressed K09680: type II pantothenate kinase
16 Sobic.002G167500 expressed protein -
17 Sobic.001G072700 expressed protein -
18 Sobic.004G294700 F-box family protein, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
19 Sobic.001G527800 DCL2, putative, expressed K11592: DICER1, endoribonuclease Dicer
20 Sobic.009G255700 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3


Gene co-expression network
sample Sobic004G263400 Sobic004G263400 Sobic004G244900 Sobic004G244900 Sobic004G263400--Sobic004G244900 Sobic001G145000 Sobic001G145000 Sobic004G263400--Sobic001G145000 Sobic001G465700 Sobic001G465700 Sobic004G263400--Sobic001G465700 Sobic001G288700 Sobic001G288700 Sobic004G263400--Sobic001G288700 Sobic004G026500 Sobic004G026500 Sobic004G263400--Sobic004G026500 Sobic002G321901 Sobic002G321901 Sobic004G263400--Sobic002G321901 Sobic003G340600 Sobic003G340600 Sobic004G263400--Sobic003G340600 Sobic006G050000 Sobic006G050000 Sobic004G263400--Sobic006G050000 Sobic001G300100 Sobic001G300100 Sobic004G263400--Sobic001G300100 Sobic001G457800 Sobic001G457800 Sobic004G244900--Sobic001G457800 Sobic004G334300 Sobic004G334300 Sobic004G244900--Sobic004G334300 Sobic003G119600 Sobic003G119600 Sobic004G244900--Sobic003G119600 Sobic003G155100 Sobic003G155100 Sobic004G244900--Sobic003G155100 Sobic008G001200 Sobic008G001200 Sobic004G244900--Sobic008G001200 Sobic004G356700 Sobic004G356700 Sobic004G244900--Sobic004G356700 Sobic009G201300 Sobic009G201300 Sobic004G244900--Sobic009G201300 Sobic002G275700 Sobic002G275700 Sobic004G244900--Sobic002G275700 Sobic003G168100 Sobic003G168100 Sobic004G244900--Sobic003G168100 Sobic002G424700 Sobic002G424700 Sobic001G145000--Sobic002G424700 Sobic001G145000--Sobic004G334300 Sobic001G145000--Sobic002G275700 Sobic001G145000--Sobic004G244900 Sobic005G142800 Sobic005G142800 Sobic001G145000--Sobic005G142800 Sobic007G103100 Sobic007G103100 Sobic001G145000--Sobic007G103100 Sobic001G527800 Sobic001G527800 Sobic001G145000--Sobic001G527800 Sobic010G123600 Sobic010G123600 Sobic001G145000--Sobic010G123600 Sobic002G316600 Sobic002G316600 Sobic001G145000--Sobic002G316600 Sobic006G038500 Sobic006G038500 Sobic001G465700--Sobic006G038500 Sobic010G043800 Sobic010G043800 Sobic001G465700--Sobic010G043800 Sobic005G111550 Sobic005G111550 Sobic001G465700--Sobic005G111550 Sobic003G442700 Sobic003G442700 Sobic001G465700--Sobic003G442700 Sobic008G001900 Sobic008G001900 Sobic001G465700--Sobic008G001900 Sobic004G294700 Sobic004G294700 Sobic001G465700--Sobic004G294700 Sobic001G530900 Sobic001G530900 Sobic001G465700--Sobic001G530900 Sobic004G298900 Sobic004G298900 Sobic001G465700--Sobic004G298900 Sobic006G031800 Sobic006G031800 Sobic001G465700--Sobic006G031800 Sobic003G433200 Sobic003G433200 Sobic001G288700--Sobic003G433200 Sobic009G255700 Sobic009G255700 Sobic001G288700--Sobic009G255700 Sobic001G288700--Sobic004G244900 Sobic004G185800 Sobic004G185800 Sobic001G288700--Sobic004G185800 Sobic001G288700--Sobic004G263400 Sobic006G216100 Sobic006G216100 Sobic001G288700--Sobic006G216100 Sobic001G288700--Sobic001G145000 Sobic006G093300 Sobic006G093300 Sobic001G288700--Sobic006G093300 Sobic001G192000 Sobic001G192000 Sobic001G288700--Sobic001G192000 Sobic008G172300 Sobic008G172300 Sobic004G026500--Sobic008G172300 Sobic001G124100 Sobic001G124100 Sobic004G026500--Sobic001G124100 Sobic009G193500 Sobic009G193500 Sobic004G026500--Sobic009G193500 Sobic001G219700 Sobic001G219700 Sobic004G026500--Sobic001G219700 Sobic001G072700 Sobic001G072700 Sobic004G026500--Sobic001G072700 Sobic002G339300 Sobic002G339300 Sobic004G026500--Sobic002G339300 Sobic003G203300 Sobic003G203300 Sobic004G026500--Sobic003G203300 Sobic007G227700 Sobic007G227700 Sobic004G026500--Sobic007G227700 Sobic002G276100 Sobic002G276100 Sobic004G026500--Sobic002G276100 Sobic008G096800 Sobic008G096800 Sobic002G321901--Sobic008G096800 Sobic003G264800 Sobic003G264800 Sobic002G321901--Sobic003G264800 Sobic004G238200 Sobic004G238200 Sobic002G321901--Sobic004G238200 Sobic006G232600 Sobic006G232600 Sobic002G321901--Sobic006G232600 Sobic010G140600 Sobic010G140600 Sobic002G321901--Sobic010G140600 Sobic001G500600 Sobic001G500600 Sobic002G321901--Sobic001G500600 Sobic002G072400 Sobic002G072400 Sobic002G321901--Sobic002G072400 Sobic004G281900 Sobic004G281900 Sobic002G321901--Sobic004G281900 Sobic006G233700 Sobic006G233700 Sobic002G321901--Sobic006G233700 Sobic003G340600--Sobic008G172300 Sobic003G221900 Sobic003G221900 Sobic003G340600--Sobic003G221900 Sobic002G167500 Sobic002G167500 Sobic003G340600--Sobic002G167500 Sobic010G092300 Sobic010G092300 Sobic003G340600--Sobic010G092300 Sobic003G398700 Sobic003G398700 Sobic003G340600--Sobic003G398700 Sobic009G162600 Sobic009G162600 Sobic003G340600--Sobic009G162600 Sobic004G181600 Sobic004G181600 Sobic003G340600--Sobic004G181600 Sobic010G013200 Sobic010G013200 Sobic003G340600--Sobic010G013200 Sobic006G086500 Sobic006G086500 Sobic003G340600--Sobic006G086500 Sobic006G050000--Sobic001G145000 Sobic009G129100 Sobic009G129100 Sobic006G050000--Sobic009G129100 Sobic006G050000--Sobic006G038500 Sobic006G256600 Sobic006G256600 Sobic006G050000--Sobic006G256600 Sobic006G050000--Sobic001G465700 Sobic004G054400 Sobic004G054400 Sobic006G050000--Sobic004G054400 Sobic002G431300 Sobic002G431300 Sobic006G050000--Sobic002G431300 Sobic006G050000--Sobic004G263400 Sobic003G193700 Sobic003G193700 Sobic006G050000--Sobic003G193700 Sobic001G300100--Sobic008G172300 Sobic007G110700 Sobic007G110700 Sobic001G300100--Sobic007G110700 Sobic010G100800 Sobic010G100800 Sobic001G300100--Sobic010G100800 Sobic001G300100--Sobic002G339300 Sobic002G404200 Sobic002G404200 Sobic001G300100--Sobic002G404200 Sobic001G300100--Sobic009G193500 Sobic010G086900 Sobic010G086900 Sobic001G300100--Sobic010G086900 Sobic001G261900 Sobic001G261900 Sobic001G300100--Sobic001G261900 Sobic004G262700 Sobic004G262700 Sobic001G300100--Sobic004G262700
Octagon: transcription factors


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