Gene annotation
Transcriptome id Sobic.002G167500.1,Sobic.002G167500.2
Synonym Sb02g021130
Functional annotation expressed protein
UniProt C5X9P1 , A0A1W0W4K1
Pfam PF14655
Panther DB PTHR12472
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14910 : -
RAP-DB (Rice) LOC_Os09g14680.1 : expressed protein
MaizeGDB (Corn) Zm00025a046447
Brachypodium KQJ89821
Barley HORVU5Hr1G055380.2 , HORVU5Hr1G055380.3 , HORVU5Hr1G055380.4 , HORVU5Hr1G055380.5 , HORVU5Hr1G055380.1
Wheat TraesCS5D02G186300 , TraesCS5B02G179900 , TraesCS5A02G181900 , TraesCS5A02G181900
Populus -


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cDNA sequences
Sobic.002G167500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G340600 VHS and GAT domain containing protein, expressed -
2 Sobic.008G172300 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
3 Sobic.003G311900 CK1_CaseinKinase_1a.3 - CK1 includes the casein kinase 1 kinases, expressed -
4 Sobic.002G131500 ABC transporter, ATP-binding protein, putative, expressed -
5 Sobic.005G026000 expressed protein -
6 Sobic.004G026500 expressed protein -
7 Sobic.010G265300 AAA-type ATPase family protein, putative, expressed -
8 Sobic.001G300100 - -
9 Sobic.001G136800 dual specificity protein phosphatase, putative, expressed -
10 Sobic.010G092300 N-rich protein, putative, expressed -
11 Sobic.002G275700 pantothenate kinase, putative, expressed K09680: type II pantothenate kinase
12 Sobic.004G262700 - -
13 Sobic.006G031800 - -
14 Sobic.001G501300 cell division control protein 48 homolog E, putative, expressed K13525: VCP, transitional endoplasmic reticulum ATPase
15 Sobic.002G276100 OsLonP4 - Putative Lon protease homologue, expressed K01338: ATP-dependent Lon protease
16 Sobic.003G398700 expressed protein K15210: snRNA-activating protein complex subunit 3
17 Sobic.010G013200 CPuORF21 - conserved peptide uORF-containing transcript, expressed K08829: male germ cell-associated kinase
18 Sobic.001G124100 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
19 Sobic.002G193100 expressed protein -
20 Sobic.010G100800 alpha-mannosidase 2, putative, expressed K01231: alpha-mannosidase II


Gene co-expression network
sample Sobic002G167500 Sobic002G167500 Sobic003G340600 Sobic003G340600 Sobic002G167500--Sobic003G340600 Sobic008G172300 Sobic008G172300 Sobic002G167500--Sobic008G172300 Sobic003G311900 Sobic003G311900 Sobic002G167500--Sobic003G311900 Sobic002G131500 Sobic002G131500 Sobic002G167500--Sobic002G131500 Sobic005G026000 Sobic005G026000 Sobic002G167500--Sobic005G026000 Sobic004G026500 Sobic004G026500 Sobic002G167500--Sobic004G026500 Sobic010G265300 Sobic010G265300 Sobic002G167500--Sobic010G265300 Sobic001G300100 Sobic001G300100 Sobic002G167500--Sobic001G300100 Sobic001G136800 Sobic001G136800 Sobic002G167500--Sobic001G136800 Sobic003G340600--Sobic008G172300 Sobic003G221900 Sobic003G221900 Sobic003G340600--Sobic003G221900 Sobic003G340600--Sobic002G167500 Sobic010G092300 Sobic010G092300 Sobic003G340600--Sobic010G092300 Sobic003G398700 Sobic003G398700 Sobic003G340600--Sobic003G398700 Sobic009G162600 Sobic009G162600 Sobic003G340600--Sobic009G162600 Sobic004G181600 Sobic004G181600 Sobic003G340600--Sobic004G181600 Sobic010G013200 Sobic010G013200 Sobic003G340600--Sobic010G013200 Sobic006G086500 Sobic006G086500 Sobic003G340600--Sobic006G086500 Sobic008G172300--Sobic004G026500 Sobic009G014100 Sobic009G014100 Sobic008G172300--Sobic009G014100 Sobic008G172300--Sobic003G340600 Sobic002G345700 Sobic002G345700 Sobic008G172300--Sobic002G345700 Sobic001G124100 Sobic001G124100 Sobic008G172300--Sobic001G124100 Sobic010G197000 Sobic010G197000 Sobic008G172300--Sobic010G197000 Sobic005G142800 Sobic005G142800 Sobic008G172300--Sobic005G142800 Sobic002G168300 Sobic002G168300 Sobic008G172300--Sobic002G168300 Sobic008G172300--Sobic002G167500 Sobic004G244900 Sobic004G244900 Sobic003G311900--Sobic004G244900 Sobic003G264100 Sobic003G264100 Sobic003G311900--Sobic003G264100 Sobic003G311900--Sobic002G167500 Sobic001G192000 Sobic001G192000 Sobic003G311900--Sobic001G192000 Sobic002G275700 Sobic002G275700 Sobic003G311900--Sobic002G275700 Sobic004G001500 Sobic004G001500 Sobic003G311900--Sobic004G001500 Sobic003G311900--Sobic005G026000 Sobic001G355800 Sobic001G355800 Sobic003G311900--Sobic001G355800 Sobic003G311900--Sobic001G136800 Sobic005G199400 Sobic005G199400 Sobic002G131500--Sobic005G199400 Sobic002G131500--Sobic002G167500 Sobic002G131500--Sobic003G311900 Sobic002G131500--Sobic001G355800 Sobic006G274800 Sobic006G274800 Sobic002G131500--Sobic006G274800 Sobic004G121300 Sobic004G121300 Sobic002G131500--Sobic004G121300 Sobic002G131500--Sobic001G136800 Sobic002G131500--Sobic004G026500 Sobic002G131500--Sobic001G192000 Sobic010G100800 Sobic010G100800 Sobic005G026000--Sobic010G100800 Sobic005G026000--Sobic003G311900 Sobic004G262700 Sobic004G262700 Sobic005G026000--Sobic004G262700 Sobic005G026000--Sobic002G167500 Sobic004G344000 Sobic004G344000 Sobic005G026000--Sobic004G344000 Sobic005G026000--Sobic001G124100 Sobic003G264800 Sobic003G264800 Sobic005G026000--Sobic003G264800 Sobic001G049500 Sobic001G049500 Sobic005G026000--Sobic001G049500 Sobic003G107500 Sobic003G107500 Sobic005G026000--Sobic003G107500 Sobic004G026500--Sobic008G172300 Sobic004G026500--Sobic001G124100 Sobic009G193500 Sobic009G193500 Sobic004G026500--Sobic009G193500 Sobic001G219700 Sobic001G219700 Sobic004G026500--Sobic001G219700 Sobic001G072700 Sobic001G072700 Sobic004G026500--Sobic001G072700 Sobic002G339300 Sobic002G339300 Sobic004G026500--Sobic002G339300 Sobic003G203300 Sobic003G203300 Sobic004G026500--Sobic003G203300 Sobic007G227700 Sobic007G227700 Sobic004G026500--Sobic007G227700 Sobic002G276100 Sobic002G276100 Sobic004G026500--Sobic002G276100 Sobic001G120500 Sobic001G120500 Sobic010G265300--Sobic001G120500 Sobic005G160400 Sobic005G160400 Sobic010G265300--Sobic005G160400 Sobic010G265300--Sobic010G092300 Sobic005G172500 Sobic005G172500 Sobic010G265300--Sobic005G172500 Sobic008G076800 Sobic008G076800 Sobic010G265300--Sobic008G076800 Sobic004G092500 Sobic004G092500 Sobic010G265300--Sobic004G092500 Sobic007G084100 Sobic007G084100 Sobic010G265300--Sobic007G084100 Sobic004G257100 Sobic004G257100 Sobic010G265300--Sobic004G257100 Sobic001G226700 Sobic001G226700 Sobic010G265300--Sobic001G226700 Sobic001G300100--Sobic008G172300 Sobic007G110700 Sobic007G110700 Sobic001G300100--Sobic007G110700 Sobic001G300100--Sobic010G100800 Sobic001G300100--Sobic002G339300 Sobic002G404200 Sobic002G404200 Sobic001G300100--Sobic002G404200 Sobic001G300100--Sobic009G193500 Sobic010G086900 Sobic010G086900 Sobic001G300100--Sobic010G086900 Sobic001G261900 Sobic001G261900 Sobic001G300100--Sobic001G261900 Sobic001G300100--Sobic004G262700 Sobic003G354600 Sobic003G354600 Sobic001G136800--Sobic003G354600 Sobic001G136800--Sobic005G199400 Sobic010G125500 Sobic010G125500 Sobic001G136800--Sobic010G125500 Sobic001G136800--Sobic003G264800 Sobic001G136800--Sobic004G244900 Sobic009G201300 Sobic009G201300 Sobic001G136800--Sobic009G201300 Sobic005G106600 Sobic005G106600 Sobic001G136800--Sobic005G106600 Sobic001G136800--Sobic003G311900 Sobic002G091600 Sobic002G091600 Sobic001G136800--Sobic002G091600
Octagon: transcription factors


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