Gene annotation
Transcriptome id Sobic.004G244900.3,Sobic.004G244900.2,Sobic.004G244900.1
Synonym
Functional annotation expressed protein
UniProt A0A1Z5RNX4 , A0A194YRH8 , A0A1Z5RNW2
Pfam -
Panther DB PTHR13052 PTHR13052:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G13950 : -
RAP-DB (Rice) LOC_Os07g27760.1 : expressed protein
MaizeGDB (Corn) Zm00025a045926
Brachypodium KQK16384
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G457800 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed K18663: activating signal cointegrator complex subunit 3
2 Sobic.004G334300 ATMAK10, putative, expressed -
3 Sobic.003G119600 zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.003G155100 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3
5 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
6 Sobic.004G356700 oligopeptidase, putative, expressed K01414: oligopeptidase A
7 Sobic.009G201300 - -
8 Sobic.002G275700 pantothenate kinase, putative, expressed K09680: type II pantothenate kinase
9 Sobic.003G168100 BZIP protein, putative, expressed -
10 Sobic.008G054000 tRNA nucleotidyltransferase/polyA polymerase family protein, putative, expressed -
11 Sobic.009G256400 ATP binding protein, putative, expressed K15192: BTAF1, TATA-binding protein-associated factor
12 Sobic.008G044100 expressed protein -
13 Sobic.002G325300 acyltransferase, putative, expressed K13506: GPAT3_4, AGPAT9, glycerol-3-phosphate O-acyltransferase 3/4
14 Sobic.003G398700 expressed protein K15210: snRNA-activating protein complex subunit 3
15 Sobic.009G255700 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
16 Sobic.002G316600 expressed protein -
17 Sobic.003G166750 - K15188: cyclin T
18 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
19 Sobic.003G311900 CK1_CaseinKinase_1a.3 - CK1 includes the casein kinase 1 kinases, expressed -
20 Sobic.001G192000 autophagy protein 9, putative, expressed K17907: autophagy-related protein 9


Gene co-expression network
sample Sobic004G244900 Sobic004G244900 Sobic001G457800 Sobic001G457800 Sobic004G244900--Sobic001G457800 Sobic004G334300 Sobic004G334300 Sobic004G244900--Sobic004G334300 Sobic003G119600 Sobic003G119600 Sobic004G244900--Sobic003G119600 Sobic003G155100 Sobic003G155100 Sobic004G244900--Sobic003G155100 Sobic008G001200 Sobic008G001200 Sobic004G244900--Sobic008G001200 Sobic004G356700 Sobic004G356700 Sobic004G244900--Sobic004G356700 Sobic009G201300 Sobic009G201300 Sobic004G244900--Sobic009G201300 Sobic002G275700 Sobic002G275700 Sobic004G244900--Sobic002G275700 Sobic003G168100 Sobic003G168100 Sobic004G244900--Sobic003G168100 Sobic009G256400 Sobic009G256400 Sobic001G457800--Sobic009G256400 Sobic001G457800--Sobic008G001200 Sobic001G370900 Sobic001G370900 Sobic001G457800--Sobic001G370900 Sobic003G166750 Sobic003G166750 Sobic001G457800--Sobic003G166750 Sobic001G457800--Sobic003G155100 Sobic004G001500 Sobic004G001500 Sobic001G457800--Sobic004G001500 Sobic001G230000 Sobic001G230000 Sobic001G457800--Sobic001G230000 Sobic003G043200 Sobic003G043200 Sobic001G457800--Sobic003G043200 Sobic001G457800--Sobic004G334300 Sobic003G186000 Sobic003G186000 Sobic004G334300--Sobic003G186000 Sobic004G334300--Sobic008G001200 Sobic004G334300--Sobic001G457800 Sobic006G040500 Sobic006G040500 Sobic004G334300--Sobic006G040500 Sobic010G123600 Sobic010G123600 Sobic004G334300--Sobic010G123600 Sobic002G308700 Sobic002G308700 Sobic004G334300--Sobic002G308700 Sobic005G162500 Sobic005G162500 Sobic004G334300--Sobic005G162500 Sobic004G334300--Sobic004G244900 Sobic004G276400 Sobic004G276400 Sobic004G334300--Sobic004G276400 Sobic003G119600--Sobic009G201300 Sobic001G439300 Sobic001G439300 Sobic003G119600--Sobic001G439300 Sobic002G325300 Sobic002G325300 Sobic003G119600--Sobic002G325300 Sobic003G119600--Sobic004G244900 Sobic002G257750 Sobic002G257750 Sobic003G119600--Sobic002G257750 Sobic005G106600 Sobic005G106600 Sobic003G119600--Sobic005G106600 Sobic003G119600--Sobic004G356700 Sobic003G253600 Sobic003G253600 Sobic003G119600--Sobic003G253600 Sobic003G354600 Sobic003G354600 Sobic003G119600--Sobic003G354600 Sobic003G155100--Sobic008G001200 Sobic006G219600 Sobic006G219600 Sobic003G155100--Sobic006G219600 Sobic010G206900 Sobic010G206900 Sobic003G155100--Sobic010G206900 Sobic003G155100--Sobic001G230000 Sobic001G375100 Sobic001G375100 Sobic003G155100--Sobic001G375100 Sobic001G194200 Sobic001G194200 Sobic003G155100--Sobic001G194200 Sobic010G010700 Sobic010G010700 Sobic003G155100--Sobic010G010700 Sobic003G155100--Sobic009G256400 Sobic004G291900 Sobic004G291900 Sobic003G155100--Sobic004G291900 Sobic008G001200--Sobic003G155100 Sobic008G001200--Sobic010G206900 Sobic008G001200--Sobic009G256400 Sobic003G205200 Sobic003G205200 Sobic008G001200--Sobic003G205200 Sobic008G001200--Sobic010G010700 Sobic008G001200--Sobic001G194200 Sobic005G001000 Sobic005G001000 Sobic008G001200--Sobic005G001000 Sobic008G001200--Sobic004G276400 Sobic004G174200 Sobic004G174200 Sobic008G001200--Sobic004G174200 Sobic004G356700--Sobic008G001200 Sobic004G356700--Sobic001G194200 Sobic002G146300 Sobic002G146300 Sobic004G356700--Sobic002G146300 Sobic004G356700--Sobic004G001500 Sobic004G356700--Sobic009G256400 Sobic004G356700--Sobic004G244900 Sobic004G356700--Sobic003G155100 Sobic004G356700--Sobic006G219600 Sobic004G356700--Sobic004G334300 Sobic009G201300--Sobic006G219600 Sobic009G201300--Sobic003G155100 Sobic006G050700 Sobic006G050700 Sobic009G201300--Sobic006G050700 Sobic009G201300--Sobic003G119600 Sobic009G201300--Sobic004G244900 Sobic001G133000 Sobic001G133000 Sobic009G201300--Sobic001G133000 Sobic009G201300--Sobic008G001200 Sobic009G201300--Sobic001G457800 Sobic002G211800 Sobic002G211800 Sobic009G201300--Sobic002G211800 Sobic001G192000 Sobic001G192000 Sobic002G275700--Sobic001G192000 Sobic002G275700--Sobic001G194200 Sobic007G103100 Sobic007G103100 Sobic002G275700--Sobic007G103100 Sobic006G041600 Sobic006G041600 Sobic002G275700--Sobic006G041600 Sobic009G255700 Sobic009G255700 Sobic002G275700--Sobic009G255700 Sobic003G195000 Sobic003G195000 Sobic002G275700--Sobic003G195000 Sobic001G289800 Sobic001G289800 Sobic002G275700--Sobic001G289800 Sobic001G527800 Sobic001G527800 Sobic002G275700--Sobic001G527800 Sobic003G196300 Sobic003G196300 Sobic002G275700--Sobic003G196300 Sobic010G126000 Sobic010G126000 Sobic003G168100--Sobic010G126000 Sobic005G167700 Sobic005G167700 Sobic003G168100--Sobic005G167700 Sobic009G129100 Sobic009G129100 Sobic003G168100--Sobic009G129100 Sobic008G044100 Sobic008G044100 Sobic003G168100--Sobic008G044100 Sobic001G433800 Sobic001G433800 Sobic003G168100--Sobic001G433800 Sobic003G398700 Sobic003G398700 Sobic003G168100--Sobic003G398700 Sobic003G168100--Sobic004G244900 Sobic004G134200 Sobic004G134200 Sobic003G168100--Sobic004G134200 Sobic004G185800 Sobic004G185800 Sobic003G168100--Sobic004G185800
Octagon: transcription factors


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