Gene annotation
Transcriptome id Sobic.001G466900.1,Sobic.001G466900.2,Sobic.001G466900.3,Sobic.001G466900.4
Synonym Sb01g043810
Functional annotation expressed protein
UniProt A0A1Z5SB07 , C5WTU3
Pfam PF04616
Panther DB PTHR22925 PTHR22925:SF32
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G67540 : Arabinanase/levansucrase/invertase
RAP-DB (Rice) LOC_Os12g21789.2,LOC_Os12g21789.1 : expressed protein
MaizeGDB (Corn) Zm00025a001167 , Zm00025a053149
Brachypodium KQK23079 , KQK23078 , KQK23082 , KQK23080 , KQK23081
Barley HORVU1Hr1G014150.1 , HORVU4Hr1G070430.1 , HORVU4Hr1G070430.8 , HORVU4Hr1G070430.9 , HORVU4Hr1G070430.2 , HORVU4Hr1G070430.4 , HORVU4Hr1G070430.5 , HORVU4Hr1G070430.6 , HORVU4Hr1G070430.7
Wheat -
Populus -


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cDNA sequences
Sobic.001G466900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G055500 inositol-1-monophosphatase, putative, expressed K01092: E3.1.3.25, IMPA, myo-inositol-1(or 4)-monophosphatase
2 Sobic.006G091300 glutathione S-transferase, N-terminal domain containing protein, expressed K03354: anaphase-promoting complex subunit 7
3 Sobic.004G301200 kinesin motor domain containing protein, expressed K11498: centromeric protein E
4 Sobic.001G402500 CPuORF14 - conserved peptide uORF-containing transcript, expressed K03262: translation initiation factor 5
5 Sobic.004G327800 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed K17278: membrane-associated progesterone receptor component
6 Sobic.007G208300 peptidase, putative, expressed K14677: aminoacylase
7 Sobic.004G144400 riboflavin biosynthesis protein ribD, putative, expressed K11752: diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
8 Sobic.001G291900 expressed protein -
9 Sobic.010G080300 peptidase, putative, expressed K01436: amidohydrolase
10 Sobic.004G350000 Citrate transporter protein, putative, expressed -
11 Sobic.002G128900 thioesterase family protein, putative, expressed -
12 Sobic.002G378000 amidase family protein, putative, expressed -
13 Sobic.010G156000 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.008G193300 sucrose transporters("PubMedID : 27986867,PubMedID : 23805151")@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@"OsSUT2(Ortholog in rice:Eom et al., 2011)"(PubMedID : 31659914)@sucrose transporter, putativ, expressed K15378: solute carrier family 45, member 1/2/4
15 Sobic.002G353300 Geranilgeranil pyrophosphate synthetase 1 GGPS1 (Os)(PubMedID : 27208977)@polyprenyl synthetase, putative, expressed K13789: geranylgeranyl diphosphate synthase, type II
16 Sobic.003G085000 sufB/sufD domain containing protein, putative, expressed K09015: Fe-S cluster assembly protein SufD
17 Sobic.001G295300 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
18 Sobic.004G307400 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
19 Sobic.003G162900 expressed protein -
20 Sobic.002G279700 3-dehydroquinate synthase, putative, expressed K01735: 3-dehydroquinate synthase


Gene co-expression network
sample Sobic001G466900 Sobic001G466900 Sobic004G055500 Sobic004G055500 Sobic001G466900--Sobic004G055500 Sobic006G091300 Sobic006G091300 Sobic001G466900--Sobic006G091300 Sobic004G301200 Sobic004G301200 Sobic001G466900--Sobic004G301200 Sobic001G402500 Sobic001G402500 Sobic001G466900--Sobic001G402500 Sobic004G327800 Sobic004G327800 Sobic001G466900--Sobic004G327800 Sobic007G208300 Sobic007G208300 Sobic001G466900--Sobic007G208300 Sobic004G144400 Sobic004G144400 Sobic001G466900--Sobic004G144400 Sobic001G291900 Sobic001G291900 Sobic001G466900--Sobic001G291900 Sobic010G080300 Sobic010G080300 Sobic001G466900--Sobic010G080300 Sobic004G055500--Sobic001G291900 Sobic006G106400 Sobic006G106400 Sobic004G055500--Sobic006G106400 Sobic004G055500--Sobic006G091300 Sobic001G531400 Sobic001G531400 Sobic004G055500--Sobic001G531400 Sobic003G085000 Sobic003G085000 Sobic004G055500--Sobic003G085000 Sobic002G304100 Sobic002G304100 Sobic004G055500--Sobic002G304100 Sobic004G055500--Sobic007G208300 Sobic004G055500--Sobic004G301200 Sobic004G336000 Sobic004G336000 Sobic004G055500--Sobic004G336000 Sobic006G091300--Sobic004G055500 Sobic006G091300--Sobic006G106400 Sobic006G091300--Sobic001G291900 Sobic008G172700 Sobic008G172700 Sobic006G091300--Sobic008G172700 Sobic006G091300--Sobic004G301200 Sobic003G162900 Sobic003G162900 Sobic006G091300--Sobic003G162900 Sobic004G165000 Sobic004G165000 Sobic006G091300--Sobic004G165000 Sobic006G047300 Sobic006G047300 Sobic006G091300--Sobic006G047300 Sobic001G277400 Sobic001G277400 Sobic006G091300--Sobic001G277400 Sobic004G301200--Sobic007G208300 Sobic004G301200--Sobic006G091300 Sobic004G301200--Sobic004G055500 Sobic004G301200--Sobic004G144400 Sobic004G301200--Sobic003G085000 Sobic001G424300 Sobic001G424300 Sobic004G301200--Sobic001G424300 Sobic002G424100 Sobic002G424100 Sobic004G301200--Sobic002G424100 Sobic004G301200--Sobic003G162900 Sobic003G267500 Sobic003G267500 Sobic004G301200--Sobic003G267500 Sobic004G040900 Sobic004G040900 Sobic001G402500--Sobic004G040900 Sobic001G120500 Sobic001G120500 Sobic001G402500--Sobic001G120500 Sobic010G265300 Sobic010G265300 Sobic001G402500--Sobic010G265300 Sobic005G142800 Sobic005G142800 Sobic001G402500--Sobic005G142800 Sobic006G119400 Sobic006G119400 Sobic001G402500--Sobic006G119400 Sobic005G026000 Sobic005G026000 Sobic001G402500--Sobic005G026000 Sobic005G231100 Sobic005G231100 Sobic001G402500--Sobic005G231100 Sobic001G124100 Sobic001G124100 Sobic001G402500--Sobic001G124100 Sobic009G162600 Sobic009G162600 Sobic001G402500--Sobic009G162600 Sobic001G037900 Sobic001G037900 Sobic004G327800--Sobic001G037900 Sobic004G327800--Sobic001G466900 Sobic007G171950 Sobic007G171950 Sobic004G327800--Sobic007G171950 Sobic003G008900 Sobic003G008900 Sobic004G327800--Sobic003G008900 Sobic001G295300 Sobic001G295300 Sobic004G327800--Sobic001G295300 Sobic003G265500 Sobic003G265500 Sobic004G327800--Sobic003G265500 Sobic001G006400 Sobic001G006400 Sobic004G327800--Sobic001G006400 Sobic002G353300 Sobic002G353300 Sobic004G327800--Sobic002G353300 Sobic002G281800 Sobic002G281800 Sobic004G327800--Sobic002G281800 Sobic007G208300--Sobic001G531400 Sobic007G208300--Sobic001G291900 Sobic007G208300--Sobic003G085000 Sobic007G208300--Sobic004G336000 Sobic007G208300--Sobic004G301200 Sobic007G208300--Sobic001G295300 Sobic001G104800 Sobic001G104800 Sobic007G208300--Sobic001G104800 Sobic006G132000 Sobic006G132000 Sobic007G208300--Sobic006G132000 Sobic007G208300--Sobic004G055500 Sobic004G019500 Sobic004G019500 Sobic004G144400--Sobic004G019500 Sobic008G067100 Sobic008G067100 Sobic004G144400--Sobic008G067100 Sobic008G090900 Sobic008G090900 Sobic004G144400--Sobic008G090900 Sobic004G003900 Sobic004G003900 Sobic004G144400--Sobic004G003900 Sobic002G181132 Sobic002G181132 Sobic004G144400--Sobic002G181132 Sobic004G144400--Sobic004G301200 Sobic009G092900 Sobic009G092900 Sobic004G144400--Sobic009G092900 Sobic002G218500 Sobic002G218500 Sobic004G144400--Sobic002G218500 Sobic009G129100 Sobic009G129100 Sobic004G144400--Sobic009G129100 Sobic001G368500 Sobic001G368500 Sobic001G291900--Sobic001G368500 Sobic001G291900--Sobic001G104800 Sobic001G291900--Sobic003G085000 Sobic001G291900--Sobic004G336000 Sobic005G002900 Sobic005G002900 Sobic001G291900--Sobic005G002900 Sobic009G059300 Sobic009G059300 Sobic001G291900--Sobic009G059300 Sobic001G309300 Sobic001G309300 Sobic001G291900--Sobic001G309300 Sobic006G055800 Sobic006G055800 Sobic001G291900--Sobic006G055800 Sobic001G291900--Sobic006G106400 Sobic010G080300--Sobic002G281800 Sobic008G193300 Sobic008G193300 Sobic010G080300--Sobic008G193300 Sobic003G125400 Sobic003G125400 Sobic010G080300--Sobic003G125400 Sobic007G046500 Sobic007G046500 Sobic010G080300--Sobic007G046500 Sobic008G063200 Sobic008G063200 Sobic010G080300--Sobic008G063200 Sobic008G144800 Sobic008G144800 Sobic010G080300--Sobic008G144800 Sobic005G072200 Sobic005G072200 Sobic010G080300--Sobic005G072200 Sobic007G029100 Sobic007G029100 Sobic010G080300--Sobic007G029100 Sobic003G310100 Sobic003G310100 Sobic010G080300--Sobic003G310100
Octagon: transcription factors


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