Gene annotation
Transcriptome id Sobic.001G402500.1
Synonym Sb01g038080
Functional annotation CPuORF14 - conserved peptide uORF-containing transcript, expressed
UniProt A0A1B6QNQ6
Pfam PF02020 PF01873
Panther DB PTHR23001 PTHR23001:SF8
NCBI CDD KOG2767; Translation initiation factor 5 (eIF-5)
KEGG Orthology K03262; translation initiation factor 5
Gene Ontology GO:0005515; protein binding GO:0006413translational initiation GO:0003743translation initiation factor activity


Orthologs (automatic annotation)
TAIR AT1G36730 : Translation initiation factor IF2/IF5
RAP-DB (Rice) LOC_Os06g48350.1 : CPuORF14 - conserved peptide uORF-containing transcript, expressed
MaizeGDB (Corn) Zm00025a034888 , Zm00025a017616
Brachypodium KQJ93319 , PNT65835
Barley HORVU6Hr1G021630.2 , HORVU6Hr1G021630.3 , HORVU6Hr1G021630.1 , HORVU6Hr1G021630.4 , HORVU6Hr1G021630.5 , HORVU6Hr1G072500.1 , HORVU6Hr1G072500.2 , HORVU6Hr1G020300.1
Wheat -
Populus PNT40688


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cDNA sequences
Sobic.001G402500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G040900 CPuORF14 - conserved peptide uORF-containing transcript, expressed K03262: translation initiation factor 5
2 Sobic.001G120500 toc64, putative, expressed -
3 Sobic.010G265300 AAA-type ATPase family protein, putative, expressed -
4 Sobic.005G142800 exportin 1, putative, expressed K15436: TRPO3, transportin-3
5 Sobic.006G119400 SWIM zinc finger family protein, putative, expressed -
6 Sobic.005G026000 expressed protein -
7 Sobic.005G231100 alpha-hemolysin, putative, expressed K08998: uncharacterized protein
8 Sobic.001G124100 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
9 Sobic.009G162600 OsFtsH8 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
10 Sobic.002G168500 NBS-LRR type disease resistance protein, putative, expressed -
11 Sobic.002G418600 expressed protein K15710: E3 ubiquitin-protein ligase SHPRH
12 Sobic.002G043600 prolyl-tRNA synthetase, putative, expressed K01881: PARS, prolyl-tRNA synthetase
13 Sobic.008G183700 cbbY protein-related, putative, expressed -
14 Sobic.005G059800 RNA recognition motif containing protein, putative, expressed K14407: CSTF2, cleavage stimulation factor subunit 2
15 Sobic.008G081300 protein kinase, putative, expressed -
16 Sobic.006G233700 PolI-like DNA polymerase, putative, expressed K02335: DNA polymerase I
17 Sobic.008G172300 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
18 Sobic.004G131800 sirohydrochlorin ferrochelatase, putative, expressed -
19 Sobic.002G181000 chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed -
20 Sobic.003G033100 RNA methyltransferase protein, putative, expressed -


Gene co-expression network
sample Sobic001G402500 Sobic001G402500 Sobic004G040900 Sobic004G040900 Sobic001G402500--Sobic004G040900 Sobic001G120500 Sobic001G120500 Sobic001G402500--Sobic001G120500 Sobic010G265300 Sobic010G265300 Sobic001G402500--Sobic010G265300 Sobic005G142800 Sobic005G142800 Sobic001G402500--Sobic005G142800 Sobic006G119400 Sobic006G119400 Sobic001G402500--Sobic006G119400 Sobic005G026000 Sobic005G026000 Sobic001G402500--Sobic005G026000 Sobic005G231100 Sobic005G231100 Sobic001G402500--Sobic005G231100 Sobic001G124100 Sobic001G124100 Sobic001G402500--Sobic001G124100 Sobic009G162600 Sobic009G162600 Sobic001G402500--Sobic009G162600 Sobic002G359400 Sobic002G359400 Sobic004G040900--Sobic002G359400 Sobic002G294800 Sobic002G294800 Sobic004G040900--Sobic002G294800 Sobic010G013200 Sobic010G013200 Sobic004G040900--Sobic010G013200 Sobic004G040900--Sobic001G402500 Sobic008G070800 Sobic008G070800 Sobic004G040900--Sobic008G070800 Sobic004G040900--Sobic001G120500 Sobic008G183700 Sobic008G183700 Sobic004G040900--Sobic008G183700 Sobic004G296400 Sobic004G296400 Sobic004G040900--Sobic004G296400 Sobic003G355900 Sobic003G355900 Sobic004G040900--Sobic003G355900 Sobic001G120500--Sobic010G265300 Sobic005G172500 Sobic005G172500 Sobic001G120500--Sobic005G172500 Sobic001G244300 Sobic001G244300 Sobic001G120500--Sobic001G244300 Sobic001G493200 Sobic001G493200 Sobic001G120500--Sobic001G493200 Sobic006G217000 Sobic006G217000 Sobic001G120500--Sobic006G217000 Sobic007G103100 Sobic007G103100 Sobic001G120500--Sobic007G103100 Sobic008G051200 Sobic008G051200 Sobic001G120500--Sobic008G051200 Sobic009G056200 Sobic009G056200 Sobic001G120500--Sobic009G056200 Sobic009G193500 Sobic009G193500 Sobic001G120500--Sobic009G193500 Sobic010G265300--Sobic001G120500 Sobic005G160400 Sobic005G160400 Sobic010G265300--Sobic005G160400 Sobic010G092300 Sobic010G092300 Sobic010G265300--Sobic010G092300 Sobic010G265300--Sobic005G172500 Sobic008G076800 Sobic008G076800 Sobic010G265300--Sobic008G076800 Sobic004G092500 Sobic004G092500 Sobic010G265300--Sobic004G092500 Sobic007G084100 Sobic007G084100 Sobic010G265300--Sobic007G084100 Sobic004G257100 Sobic004G257100 Sobic010G265300--Sobic004G257100 Sobic001G226700 Sobic001G226700 Sobic010G265300--Sobic001G226700 Sobic005G142800--Sobic006G119400 Sobic001G298900 Sobic001G298900 Sobic005G142800--Sobic001G298900 Sobic005G142800--Sobic001G124100 Sobic004G134200 Sobic004G134200 Sobic005G142800--Sobic004G134200 Sobic008G172300 Sobic008G172300 Sobic005G142800--Sobic008G172300 Sobic002G345700 Sobic002G345700 Sobic005G142800--Sobic002G345700 Sobic002G418600 Sobic002G418600 Sobic005G142800--Sobic002G418600 Sobic010G079500 Sobic010G079500 Sobic005G142800--Sobic010G079500 Sobic007G111400 Sobic007G111400 Sobic005G142800--Sobic007G111400 Sobic006G119400--Sobic010G079500 Sobic006G119400--Sobic005G142800 Sobic004G107200 Sobic004G107200 Sobic006G119400--Sobic004G107200 Sobic010G053600 Sobic010G053600 Sobic006G119400--Sobic010G053600 Sobic002G043100 Sobic002G043100 Sobic006G119400--Sobic002G043100 Sobic006G049900 Sobic006G049900 Sobic006G119400--Sobic006G049900 Sobic008G132900 Sobic008G132900 Sobic006G119400--Sobic008G132900 Sobic008G016300 Sobic008G016300 Sobic006G119400--Sobic008G016300 Sobic006G119400--Sobic001G298900 Sobic010G100800 Sobic010G100800 Sobic005G026000--Sobic010G100800 Sobic003G311900 Sobic003G311900 Sobic005G026000--Sobic003G311900 Sobic004G262700 Sobic004G262700 Sobic005G026000--Sobic004G262700 Sobic002G167500 Sobic002G167500 Sobic005G026000--Sobic002G167500 Sobic004G344000 Sobic004G344000 Sobic005G026000--Sobic004G344000 Sobic005G026000--Sobic001G124100 Sobic003G264800 Sobic003G264800 Sobic005G026000--Sobic003G264800 Sobic001G049500 Sobic001G049500 Sobic005G026000--Sobic001G049500 Sobic003G107500 Sobic003G107500 Sobic005G026000--Sobic003G107500 Sobic001G500600 Sobic001G500600 Sobic005G231100--Sobic001G500600 Sobic003G085100 Sobic003G085100 Sobic005G231100--Sobic003G085100 Sobic009G148500 Sobic009G148500 Sobic005G231100--Sobic009G148500 Sobic001G516901 Sobic001G516901 Sobic005G231100--Sobic001G516901 Sobic003G232700 Sobic003G232700 Sobic005G231100--Sobic003G232700 Sobic004G238200 Sobic004G238200 Sobic005G231100--Sobic004G238200 Sobic007G005400 Sobic007G005400 Sobic005G231100--Sobic007G005400 Sobic002G043600 Sobic002G043600 Sobic005G231100--Sobic002G043600 Sobic003G234900 Sobic003G234900 Sobic005G231100--Sobic003G234900 Sobic004G026500 Sobic004G026500 Sobic001G124100--Sobic004G026500 Sobic001G219700 Sobic001G219700 Sobic001G124100--Sobic001G219700 Sobic001G124100--Sobic005G142800 Sobic001G124100--Sobic008G172300 Sobic001G396000 Sobic001G396000 Sobic001G124100--Sobic001G396000 Sobic002G339300 Sobic002G339300 Sobic001G124100--Sobic002G339300 Sobic002G168500 Sobic002G168500 Sobic001G124100--Sobic002G168500 Sobic006G233700 Sobic006G233700 Sobic001G124100--Sobic006G233700 Sobic006G219600 Sobic006G219600 Sobic001G124100--Sobic006G219600 Sobic003G340600 Sobic003G340600 Sobic009G162600--Sobic003G340600 Sobic002G349100 Sobic002G349100 Sobic009G162600--Sobic002G349100 Sobic009G103000 Sobic009G103000 Sobic009G162600--Sobic009G103000 Sobic002G072400 Sobic002G072400 Sobic009G162600--Sobic002G072400 Sobic002G275100 Sobic002G275100 Sobic009G162600--Sobic002G275100 Sobic003G105900 Sobic003G105900 Sobic009G162600--Sobic003G105900 Sobic008G089900 Sobic008G089900 Sobic009G162600--Sobic008G089900 Sobic004G300100 Sobic004G300100 Sobic009G162600--Sobic004G300100 Sobic003G029500 Sobic003G029500 Sobic009G162600--Sobic003G029500
Octagon: transcription factors


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