Gene annotation
| Transcriptome id | Sobic.008G193300.1 |
|---|---|
| Synonym | ATSUC4, SUT4, SUC4, ATSUT4, SbSUT4;SUT4;SbSUT2;SbSUT2, Sb08g023310 |
| Functional annotation | sucrose transporters( (PubMedID : 27986867,(PubMedID : 23805151) Sucrose transporter genes (PubMedID : 24456189) Sugar transporter (PubMedID : 27330561) "OsSUT2(Ortholog in rice:Eom et al., 2011)" (PubMedID : 31659914) sucrose transporter, putativ, expressed |
| UniProt | D0V555 , C5YTD9 |
| Pfam | PF07690 |
| Panther DB | PTHR19432 PTHR19432:SF38 |
| NCBI CDD | KOG0637; Sucrose transporter and related proteins |
| KEGG Orthology | K15378; solute carrier family 45, member 1/2/4 |
| Gene Ontology | GO:0016021; integral component of membrane |
Orthologs (automatic annotation)
| TAIR | AT1G09960 : sucrose transporter 4 |
|---|---|
| RAP-DB (Rice) | LOC_Os12g44380.1 : sucrose transporter, putativ, expressed |
| MaizeGDB (Corn) | Zm00025a025060 |
| Brachypodium | KQK01567 , KQK01566 , KQJ85566 , KQK01568 |
| Barley | HORVU5Hr1G000120.1 , HORVU5Hr1G000010.1 , HORVU5Hr1G000010.2 , HORVU5Hr1G000010.3 |
| Wheat | TraesCS5B02G000100 , TraesCSU02G136300 , TraesCS5D02G001200 |
| Populus | - |
JBrowse
| Sobic.008G193300 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.008G063200 | expressed protein | - |
| 2 | Sobic.010G080300 | peptidase, putative, expressed | K01436: amidohydrolase |
| 3 | Sobic.002G404200 | F-box domain containing protein, expressed | - |
| 4 | Sobic.004G265900 | class I glutamine amidotransferase, putative, expressed | K01956: carA, carbamoyl-phosphate synthase small subunit |
| 5 | Sobic.006G214700 | APO, putative, expressed | - |
| 6 | Sobic.001G450600 | uncharacterized protein sll0194, putative, expressed | K03118: sec-independent protein translocase protein TatC |
| 7 | Sobic.009G079950 | - | - |
| 8 | Sobic.002G142066 | - | K18045: SIW14, tyrosine-protein phosphatase SIW14 |
| 9 | Sobic.004G144000 | - | - |
| 10 | Sobic.003G084500 | peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed | K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family |
| 11 | Sobic.005G028900 | cytochrome c-type biogenesis protein dbsD-like, putative, expressed | - |
| 12 | Sobic.009G141400 | transcriptional regulator, putative, expressed | - |
| 13 | Sobic.002G303300 | anthranilate phosphoribosyltransferase, putative, expressed | - |
| 14 | Sobic.003G310100 | ABC transporter, ATP-binding protein, putative, expressed | - |
| 15 | Sobic.009G036300 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed | K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17 |
| 16 | Sobic.003G103200 | pex14, putative, expressed | K13343: peroxin-14 |
| 17 | Sobic.002G168500 | NBS-LRR type disease resistance protein, putative, expressed | - |
| 18 | Sobic.008G089500 | Fe-S metabolism associated domain containing protein, expressed | K03517: quinolinate synthase |
| 19 | Sobic.010G140600 | bolA, putative, expressed | - |
| 20 | Sobic.004G350000 | Citrate transporter protein, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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