Gene annotation
| Transcriptome id | Sobic.003G378400.2 |
|---|---|
| Synonym | Sb03g041800 |
| Functional annotation | DUF803 domain containing, putative, expressed |
| UniProt | A0A1W0W0S7 |
| Pfam | PF05653 |
| Panther DB | PTHR12570 PTHR12570:SF22 |
| NCBI CDD | KOG2922; Uncharacterized conserved protein |
| KEGG Orthology | - |
| Gene Ontology | GO:0016021; integral component of membrane GO:0015693magnesium ion transport GO:0015095magnesium ion transmembrane transporter activity |
Orthologs (automatic annotation)
| TAIR | AT1G71900 : Protein of unknown function (DUF803) |
|---|---|
| RAP-DB (Rice) | LOC_Os01g65986.1 : DUF803 domain containing, putative, expressed |
| MaizeGDB (Corn) | Zm00025a026560 , Zm00025a037360 |
| Brachypodium | KQK06160 , KQK06161 |
| Barley | HORVU3Hr1G091150.9 , HORVU3Hr1G091150.8 , HORVU3Hr1G091150.3 , HORVU3Hr1G091150.7 , HORVU3Hr1G091150.6 , HORVU1Hr1G065000.8 , HORVU1Hr1G065000.9 , HORVU1Hr1G065000.6 , HORVU1Hr1G065000.7 , HORVU1Hr1G065000.4 , HORVU1Hr1G065000.5 , HORVU1Hr1G065000.2 , HORVU1Hr1G065000.3 , HORVU1Hr1G065000.1 , HORVU1Hr1G065000.10 , HORVU3Hr1G091150.15 , HORVU3Hr1G091150.14 , HORVU3Hr1G091150.16 , HORVU3Hr1G091150.11 , HORVU3Hr1G091150.10 , HORVU3Hr1G091150.13 , HORVU3Hr1G091150.12 |
| Wheat | TraesCS1D02G264900 , TraesCS3D02G402700 , TraesCS3B02G440800 , TraesCS1B02G275400 , TraesCS3A02G407400 , TraesCS3A02G407400 , TraesCS1A02G264700 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G462200 | mannose-1-phosphate guanyltransferase, putative, expressed | K00966: mannose-1-phosphate guanylyltransferase |
| 2 | Sobic.001G486700 | adenylosuccinate synthetase, chloroplast precursor, putative, expressed | K01939: purA, adenylosuccinate synthase |
| 3 | Sobic.002G428800 | ubiquitin-activating enzyme, putative, expressed | K03178: UBE1, ubiquitin-activating enzyme E1 |
| 4 | Sobic.001G279900 | CDPK - calmodulin-binding receptor-like cytoplasmic kinase 3(PubMedID : 31721651)@wall-associated receptor kinase-like 20 precursor, putative, expressed | - |
| 5 | Sobic.008G118900 | OsAPRL6 adenosine 5\'-phosphosulfate reductase-like OsAPRL6, expressed | - |
| 6 | Sobic.004G290000 | OsSub19 - Putative Subtilisin homologue, expressed | K01280: tripeptidyl-peptidase II |
| 7 | Sobic.008G135200 | importin subunit beta, putative, expressed | K14293: KPNB1, importin subunit beta-1 |
| 8 | Sobic.006G238700 | C2 domain containing protein, expressed | - |
| 9 | Sobic.008G103800 | expressed protein | - |
| 10 | Sobic.007G029100 | ATPase BadF/BadG/BcrA/BcrD type, putative, expressed | - |
| 11 | Sobic.010G100800 | alpha-mannosidase 2, putative, expressed | K01231: alpha-mannosidase II |
| 12 | Sobic.001G069600 | ad-003, putative, expressed | K16219: NTMT1, METTL11A, protein N-terminal methyltransferase |
| 13 | Sobic.002G404200 | F-box domain containing protein, expressed | - |
| 14 | Sobic.004G265900 | class I glutamine amidotransferase, putative, expressed | K01956: carA, carbamoyl-phosphate synthase small subunit |
| 15 | Sobic.005G140500 | peptidase, M24 family protein, putative, expressed | K01262: Xaa-Pro aminopeptidase |
| 16 | Sobic.009G094700 | haloacid dehalogenase-like hydrolase family protein, putative, expressed | - |
| 17 | Sobic.004G124100 | EMB1303, putative, expressed | - |
| 18 | Sobic.003G376400 | expressed protein | - |
| 19 | Sobic.004G190700 | zinc finger, C3HC4 type, putative, expressed | - |
| 20 | Sobic.008G193300 | sucrose transporters("PubMedID : 27986867,PubMedID : 23805151")@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@"OsSUT2(Ortholog in rice:Eom et al., 2011)"(PubMedID : 31659914)@sucrose transporter, putativ, expressed | K15378: solute carrier family 45, member 1/2/4 |
Gene co-expression network
Octagon: transcription factors
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