Gene annotation
Transcriptome id Sobic.008G103800.1
Synonym Sb08g015570
Functional annotation expressed protein
UniProt C5YNX6
Pfam -
Panther DB PTHR36080 PTHR36080:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G64180 : -
RAP-DB (Rice) LOC_Os12g31790.1 : expressed protein
MaizeGDB (Corn) Zm00025a054195 , Zm00025a025591
Brachypodium KQJ86643
Barley -
Wheat TraesCS5B02G109600 , TraesCS5D02G121000 , TraesCS5A02G107400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G051100 RNA polymerase II subunit A C-terminal domain phosphatase ssu72, putative, expressed K15544: RNA polymerase II subunit A C-terminal domain phosphatase SSU72
2 Sobic.005G155800 actin polymerization factor, putative, expressed K05754: actin related protein 2/3 complex, subunit 5
3 Sobic.004G184000 SFT2, putative, expressed -
4 Sobic.004G124100 EMB1303, putative, expressed -
5 Sobic.010G267400 similar to Heat shock protein 90(PubMedID : 29862293)@heat shock protein, putative, expressed K09487: HSP90B, heat shock protein 90kDa beta
6 Sobic.001G408800 hydrolase, alpha/beta fold family protein, putative, expressed -
7 Sobic.006G281500 prenylcysteine oxidase 1 precursor, putative, expressed K05906: PCYOX1, prenylcysteine oxidase / farnesylcysteine lyase
8 Sobic.006G020900 phosphoglycerate mutase, putative, expressed -
9 Sobic.005G105500 expressed protein -
10 Sobic.004G283600 O-acyltransferase, putative, expressed K13519: LPT1, lysophospholipid acyltransferase
11 Sobic.004G291400 rho guanine nucleotide exchange factor, putative, expressed -
12 Sobic.006G216000 DAG protein, chloroplast precursor, putative, expressed -
13 Sobic.005G004100 outer membrane protein, OMP85 family, putative, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
14 Sobic.002G342500 glycosyltransferase sugar-binding region containing DXD motif, putative, expressed -
15 Sobic.007G090200 haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed K17623: PUDP, pseudouridine 5'-phosphatase
16 Sobic.009G256000 vacuolar ATP synthase subunit C, putative, expressed K02148: ATPeV1C, V-type H+-transporting ATPase subunit C
17 Sobic.001G428800 vacuolar sorting protein, putative, expressed -
18 Sobic.009G151800 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2
19 Sobic.001G004200 uncharacterized protein yeiN, putative, expressed K16329: pseudouridylate synthase
20 Sobic.009G045900 tRNA synthetase class II core domain containing protein, expressed K01892: HARS, histidyl-tRNA synthetase


Gene co-expression network
sample Sobic008G103800 Sobic008G103800 Sobic008G051100 Sobic008G051100 Sobic008G103800--Sobic008G051100 Sobic005G155800 Sobic005G155800 Sobic008G103800--Sobic005G155800 Sobic004G184000 Sobic004G184000 Sobic008G103800--Sobic004G184000 Sobic004G124100 Sobic004G124100 Sobic008G103800--Sobic004G124100 Sobic010G267400 Sobic010G267400 Sobic008G103800--Sobic010G267400 Sobic001G408800 Sobic001G408800 Sobic008G103800--Sobic001G408800 Sobic006G281500 Sobic006G281500 Sobic008G103800--Sobic006G281500 Sobic006G020900 Sobic006G020900 Sobic008G103800--Sobic006G020900 Sobic005G105500 Sobic005G105500 Sobic008G103800--Sobic005G105500 Sobic004G117800 Sobic004G117800 Sobic008G051100--Sobic004G117800 Sobic008G051100--Sobic008G103800 Sobic001G280400 Sobic001G280400 Sobic008G051100--Sobic001G280400 Sobic008G051100--Sobic004G184000 Sobic004G206300 Sobic004G206300 Sobic008G051100--Sobic004G206300 Sobic003G167900 Sobic003G167900 Sobic008G051100--Sobic003G167900 Sobic008G051100--Sobic006G020900 Sobic001G099800 Sobic001G099800 Sobic008G051100--Sobic001G099800 Sobic008G051100--Sobic001G408800 Sobic006G087400 Sobic006G087400 Sobic005G155800--Sobic006G087400 Sobic009G174000 Sobic009G174000 Sobic005G155800--Sobic009G174000 Sobic002G259400 Sobic002G259400 Sobic005G155800--Sobic002G259400 Sobic001G428800 Sobic001G428800 Sobic005G155800--Sobic001G428800 Sobic010G230600 Sobic010G230600 Sobic005G155800--Sobic010G230600 Sobic005G155800--Sobic008G103800 Sobic004G232800 Sobic004G232800 Sobic005G155800--Sobic004G232800 Sobic007G165900 Sobic007G165900 Sobic005G155800--Sobic007G165900 Sobic001G384400 Sobic001G384400 Sobic005G155800--Sobic001G384400 Sobic007G165300 Sobic007G165300 Sobic004G184000--Sobic007G165300 Sobic005G129201 Sobic005G129201 Sobic004G184000--Sobic005G129201 Sobic003G326900 Sobic003G326900 Sobic004G184000--Sobic003G326900 Sobic010G258000 Sobic010G258000 Sobic004G184000--Sobic010G258000 Sobic001G451901 Sobic001G451901 Sobic004G184000--Sobic001G451901 Sobic003G348200 Sobic003G348200 Sobic004G184000--Sobic003G348200 Sobic007G217400 Sobic007G217400 Sobic004G184000--Sobic007G217400 Sobic001G110300 Sobic001G110300 Sobic004G184000--Sobic001G110300 Sobic001G116000 Sobic001G116000 Sobic004G184000--Sobic001G116000 Sobic004G291400 Sobic004G291400 Sobic004G124100--Sobic004G291400 Sobic001G468600 Sobic001G468600 Sobic004G124100--Sobic001G468600 Sobic006G002201 Sobic006G002201 Sobic004G124100--Sobic006G002201 Sobic004G248900 Sobic004G248900 Sobic004G124100--Sobic004G248900 Sobic006G010400 Sobic006G010400 Sobic004G124100--Sobic006G010400 Sobic006G157000 Sobic006G157000 Sobic004G124100--Sobic006G157000 Sobic008G118600 Sobic008G118600 Sobic004G124100--Sobic008G118600 Sobic004G124100--Sobic005G105500 Sobic004G124100--Sobic008G103800 Sobic010G040100 Sobic010G040100 Sobic010G267400--Sobic010G040100 Sobic010G267400--Sobic008G103800 Sobic009G051700 Sobic009G051700 Sobic010G267400--Sobic009G051700 Sobic007G090200 Sobic007G090200 Sobic010G267400--Sobic007G090200 Sobic002G186300 Sobic002G186300 Sobic010G267400--Sobic002G186300 Sobic010G267400--Sobic004G184000 Sobic002G367800 Sobic002G367800 Sobic010G267400--Sobic002G367800 Sobic002G070600 Sobic002G070600 Sobic010G267400--Sobic002G070600 Sobic005G112100 Sobic005G112100 Sobic010G267400--Sobic005G112100 Sobic004G265600 Sobic004G265600 Sobic001G408800--Sobic004G265600 Sobic001G408800--Sobic008G103800 Sobic001G408800--Sobic008G051100 Sobic009G125900 Sobic009G125900 Sobic001G408800--Sobic009G125900 Sobic001G533100 Sobic001G533100 Sobic001G408800--Sobic001G533100 Sobic002G342500 Sobic002G342500 Sobic001G408800--Sobic002G342500 Sobic010G059200 Sobic010G059200 Sobic001G408800--Sobic010G059200 Sobic006G038200 Sobic006G038200 Sobic001G408800--Sobic006G038200 Sobic004G275400 Sobic004G275400 Sobic001G408800--Sobic004G275400 Sobic001G263000 Sobic001G263000 Sobic006G281500--Sobic001G263000 Sobic009G227900 Sobic009G227900 Sobic006G281500--Sobic009G227900 Sobic009G081500 Sobic009G081500 Sobic006G281500--Sobic009G081500 Sobic002G317300 Sobic002G317300 Sobic006G281500--Sobic002G317300 Sobic006G281500--Sobic005G105500 Sobic006G281500--Sobic002G259400 Sobic007G188600 Sobic007G188600 Sobic006G281500--Sobic007G188600 Sobic003G119400 Sobic003G119400 Sobic006G281500--Sobic003G119400 Sobic010G085200 Sobic010G085200 Sobic006G281500--Sobic010G085200 Sobic001G473400 Sobic001G473400 Sobic006G020900--Sobic001G473400 Sobic002G410700 Sobic002G410700 Sobic006G020900--Sobic002G410700 Sobic003G388700 Sobic003G388700 Sobic006G020900--Sobic003G388700 Sobic006G020900--Sobic005G105500 Sobic006G020900--Sobic004G291400 Sobic001G304000 Sobic001G304000 Sobic006G020900--Sobic001G304000 Sobic009G256000 Sobic009G256000 Sobic006G020900--Sobic009G256000 Sobic003G392600 Sobic003G392600 Sobic006G020900--Sobic003G392600 Sobic009G240700 Sobic009G240700 Sobic006G020900--Sobic009G240700 Sobic001G281900 Sobic001G281900 Sobic005G105500--Sobic001G281900 Sobic001G458700 Sobic001G458700 Sobic005G105500--Sobic001G458700 Sobic002G341800 Sobic002G341800 Sobic005G105500--Sobic002G341800 Sobic001G145500 Sobic001G145500 Sobic005G105500--Sobic001G145500 Sobic001G096100 Sobic001G096100 Sobic005G105500--Sobic001G096100 Sobic006G211800 Sobic006G211800 Sobic005G105500--Sobic006G211800 Sobic007G176200 Sobic007G176200 Sobic005G105500--Sobic007G176200 Sobic003G330500 Sobic003G330500 Sobic005G105500--Sobic003G330500 Sobic005G105500--Sobic006G002201
Octagon: transcription factors


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