Gene annotation
Transcriptome id Sobic.005G004100.1
Synonym Sb05g000490
Functional annotation outer membrane protein, OMP85 family, putative, expressed
UniProt C5Y2Z5
Pfam PF01103
Panther DB PTHR12815 PTHR12815:SF15
NCBI CDD KOG2602; Predicted cell surface protein homologous to bacterial outer membrane proteins
KEGG Orthology K07277; SAM50, TOB55, outer membrane protein insertion porin family
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G05520 : Outer membrane OMP85 family protein
RAP-DB (Rice) LOC_Os12g01500.1 : outer membrane protein, OMP85 family, putative, expressed
MaizeGDB (Corn) Zm00025a033269 , Zm00025a053660
Brachypodium KQJ92634 , KQJ92635 , PNT65597
Barley -
Wheat TraesCS5B02G151700 , TraesCS5D02G158200 , TraesCS5D02G158200 , TraesCS5A02G152900
Populus -


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cDNA sequences
Sobic.005G004100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G256000 vacuolar ATP synthase subunit C, putative, expressed K02148: ATPeV1C, V-type H+-transporting ATPase subunit C
2 Sobic.004G060100 ATP synthase, putative, expressed K02145: ATPeV1A, V-type H+-transporting ATPase subunit A
3 Sobic.004G283600 O-acyltransferase, putative, expressed K13519: LPT1, lysophospholipid acyltransferase
4 Sobic.005G018800 expressed protein -
5 Sobic.007G161200 expressed protein -
6 Sobic.008G021200 vacuolar ATP synthase subunit C, putative, expressed K02148: ATPeV1C, V-type H+-transporting ATPase subunit C
7 Sobic.008G004300 outer membrane protein, OMP85 family, putative, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
8 Sobic.002G301200 OsSCP39 - Putative Serine Carboxypeptidase homologue, expressed K16298: serine carboxypeptidase-like clade IV
9 Sobic.002G410700 vacuolar ATP synthase subunit F, putative, expressed K02151: ATPeV1F, V-type H+-transporting ATPase subunit F
10 Sobic.001G004200 uncharacterized protein yeiN, putative, expressed K16329: pseudouridylate synthase
11 Sobic.008G150300 Lg106, putative, expressed -
12 Sobic.003G200800 vacuolar ATP synthase subunit d, putative, expressed K02146: ATPeV0D, V-type H+-transporting ATPase subunit d
13 Sobic.001G486700 adenylosuccinate synthetase, chloroplast precursor, putative, expressed K01939: purA, adenylosuccinate synthase
14 Sobic.001G338400 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
15 Sobic.006G020900 phosphoglycerate mutase, putative, expressed -
16 Sobic.006G237200 vacuolar ATP synthase subunit D 1, putative, expressed K02149: ATPeV1D, V-type H+-transporting ATPase subunit D
17 Sobic.005G105500 expressed protein -
18 Sobic.002G070600 coatomer subunit gamma-2, putative, expressed K17267: coatomer subunit gamma
19 Sobic.002G321400 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
20 Sobic.008G072200 coatomer subunit delta, putative, expressed -


Gene co-expression network
sample Sobic005G004100 Sobic005G004100 Sobic009G256000 Sobic009G256000 Sobic005G004100--Sobic009G256000 Sobic004G060100 Sobic004G060100 Sobic005G004100--Sobic004G060100 Sobic004G283600 Sobic004G283600 Sobic005G004100--Sobic004G283600 Sobic005G018800 Sobic005G018800 Sobic005G004100--Sobic005G018800 Sobic007G161200 Sobic007G161200 Sobic005G004100--Sobic007G161200 Sobic008G021200 Sobic008G021200 Sobic005G004100--Sobic008G021200 Sobic008G004300 Sobic008G004300 Sobic005G004100--Sobic008G004300 Sobic002G301200 Sobic002G301200 Sobic005G004100--Sobic002G301200 Sobic002G410700 Sobic002G410700 Sobic005G004100--Sobic002G410700 Sobic009G256000--Sobic005G004100 Sobic009G256000--Sobic004G060100 Sobic009G256000--Sobic008G021200 Sobic009G256000--Sobic007G161200 Sobic009G256000--Sobic005G018800 Sobic009G256000--Sobic004G283600 Sobic003G200800 Sobic003G200800 Sobic009G256000--Sobic003G200800 Sobic009G256000--Sobic002G410700 Sobic006G237200 Sobic006G237200 Sobic009G256000--Sobic006G237200 Sobic004G060100--Sobic008G021200 Sobic004G060100--Sobic007G161200 Sobic004G060100--Sobic005G018800 Sobic004G060100--Sobic009G256000 Sobic004G060100--Sobic003G200800 Sobic004G060100--Sobic004G283600 Sobic004G060100--Sobic005G004100 Sobic002G321400 Sobic002G321400 Sobic004G060100--Sobic002G321400 Sobic001G435400 Sobic001G435400 Sobic004G060100--Sobic001G435400 Sobic004G283600--Sobic009G256000 Sobic004G283600--Sobic004G060100 Sobic004G283600--Sobic007G161200 Sobic004G283600--Sobic005G018800 Sobic004G283600--Sobic005G004100 Sobic004G283600--Sobic008G021200 Sobic004G283600--Sobic003G200800 Sobic003G165101 Sobic003G165101 Sobic004G283600--Sobic003G165101 Sobic001G004200 Sobic001G004200 Sobic004G283600--Sobic001G004200 Sobic005G018800--Sobic003G200800 Sobic005G018800--Sobic008G021200 Sobic005G018800--Sobic004G060100 Sobic005G018800--Sobic007G161200 Sobic005G018800--Sobic009G256000 Sobic001G115700 Sobic001G115700 Sobic005G018800--Sobic001G115700 Sobic005G018800--Sobic004G283600 Sobic001G304000 Sobic001G304000 Sobic005G018800--Sobic001G304000 Sobic005G018800--Sobic005G004100 Sobic007G161200--Sobic004G060100 Sobic007G161200--Sobic003G200800 Sobic007G161200--Sobic005G018800 Sobic007G161200--Sobic009G256000 Sobic004G347600 Sobic004G347600 Sobic007G161200--Sobic004G347600 Sobic007G161200--Sobic008G021200 Sobic007G161200--Sobic001G115700 Sobic008G150300 Sobic008G150300 Sobic007G161200--Sobic008G150300 Sobic007G161200--Sobic004G283600 Sobic008G021200--Sobic005G018800 Sobic008G021200--Sobic004G060100 Sobic008G021200--Sobic003G200800 Sobic008G021200--Sobic009G256000 Sobic008G021200--Sobic007G161200 Sobic008G021200--Sobic004G283600 Sobic008G021200--Sobic006G237200 Sobic008G021200--Sobic005G004100 Sobic008G021200--Sobic002G321400 Sobic004G290000 Sobic004G290000 Sobic008G004300--Sobic004G290000 Sobic002G166300 Sobic002G166300 Sobic008G004300--Sobic002G166300 Sobic001G301200 Sobic001G301200 Sobic008G004300--Sobic001G301200 Sobic008G004300--Sobic005G004100 Sobic009G139900 Sobic009G139900 Sobic008G004300--Sobic009G139900 Sobic001G434200 Sobic001G434200 Sobic008G004300--Sobic001G434200 Sobic002G209400 Sobic002G209400 Sobic008G004300--Sobic002G209400 Sobic001G333100 Sobic001G333100 Sobic008G004300--Sobic001G333100 Sobic010G206300 Sobic010G206300 Sobic008G004300--Sobic010G206300 Sobic002G301200--Sobic005G004100 Sobic001G486700 Sobic001G486700 Sobic002G301200--Sobic001G486700 Sobic003G420900 Sobic003G420900 Sobic002G301200--Sobic003G420900 Sobic002G301200--Sobic002G321400 Sobic004G275600 Sobic004G275600 Sobic002G301200--Sobic004G275600 Sobic002G301200--Sobic009G256000 Sobic007G130800 Sobic007G130800 Sobic002G301200--Sobic007G130800 Sobic004G314500 Sobic004G314500 Sobic002G301200--Sobic004G314500 Sobic010G059200 Sobic010G059200 Sobic002G301200--Sobic010G059200 Sobic003G216500 Sobic003G216500 Sobic002G410700--Sobic003G216500 Sobic002G410700--Sobic006G237200 Sobic002G410700--Sobic009G256000 Sobic002G410700--Sobic008G150300 Sobic001G473400 Sobic001G473400 Sobic002G410700--Sobic001G473400 Sobic006G020900 Sobic006G020900 Sobic002G410700--Sobic006G020900 Sobic009G240700 Sobic009G240700 Sobic002G410700--Sobic009G240700 Sobic002G410700--Sobic007G161200 Sobic003G170300 Sobic003G170300 Sobic002G410700--Sobic003G170300
Octagon: transcription factors


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